Timeline

Aude Bernheim

Head of Structure

24 Jul 2025

publication

A human homolog of SIR2 antiphage proteins mediates immunity via the Toll-like receptor pathway

08 May 2025

publication

Sedentary chromosomal integrons as biobanks of bacterial antiphage defense systems.

02 Jan 2025

publication

Evolutionary origins of archaeal and eukaryotic RNA-guided RNA modification in bacterial IS110 transposons.

01 Jan 2025

publication

Strain phylogroup and environmental constraints shape Escherichia coli dynamics and diversity over a 20-year human gut time series

09 Dec 2024

publication

Exploring the diversity of anti-defense systems across prokaryotes, phages and mobile genetic elements.

01 Nov 2024

publication

Prediction of strain level phage-host interactions across the Escherichia genus using only genomic information.

23 Aug 2024

publication

Conservation of antiviral systems across domains of life reveals immune genes in humans

07 Aug 2024

publication

A virally encoded tRNA neutralizes the PARIS antiviral defence system

04 Jul 2024

publication

Viperin immunity evolved across the tree of life through serial innovations on a conserved scaffold

01 Jul 2024

publication

The immune modules conserved across the tree of life: Towards a definition of ancestral immunity.

24 Jun 2024

event

Seminar Joe Bondy-Denomy “A bacteriophage that evades immune nucleases by pretending to be a eukaryote”

26 Jan 2024

publication

A Comprehensive Resource for Exploring Antiphage Defense: DefenseFinder Webservice, Wiki and Databases

08 Dec 2023

news

Many congratulations to Aude Bernheim, appointed as Member of the Presidential Council of Science

24 Nov 2023

event

“GG department seminar: Carrie Shaffer (University of Kentucky, USA) ; “New insights into ancient mechanisms underscoring trans-kingdom DNA conjugation” ; Thursday 7 December @ 11.00 am ; Auditorium François Jacob

01 Nov 2023

publication

Immunité bactérienne : à la découverte d’un nouveau monde [Bacterial immunity: Uncovering a new world]

01 Oct 2023

publication

The highly diverse antiphage defence systems of bacteria.

25 Sep 2023

event

The twilight zone between transposons and endogenous retroviruses

01 Aug 2023

publication

Genomic characterization of the antiviral arsenal of Actinobacteria.

16 Mar 2023

team

Molecular diversity of microbes

01 Feb 2023

publication

Synergy and regulation of antiphage systems: toward the existence of a bacterial immune system?

09 Nov 2022

publication

An expanded arsenal of immune systems that protect bacteria from phages.

01 Nov 2022

publication

Multiple phage resistance systems inhibit infection via SIR2-dependent NAD+ depletion.

01 Jun 2022

publication

CRISPR-Cas and restriction-modification team up to achieve long-term immunity.

11 May 2022

publication

Phages and their satellites encode hotspots of antiviral systems

10 May 2022

publication

Systematic and quantitative view of the antiviral arsenal of prokaryotes.

03 Feb 2022

publication

Evolutionary and mechanistic diversity of Type I-F CRISPR-associated transposons.

01 Jan 2022

publication

Systematic and quantitative view of the antiviral arsenal of prokaryotes

01 Jan 2021

publication

Prokaryotic viperins produce diverse antiviral molecules.

10 Dec 2020

publication

Bacterial Retrons Function In Anti-Phage Defense.

01 Feb 2020

publication

The pan-immune system of bacteria: antiviral defence as a community resource.

24 Jan 2020

publication

Atypical organizations and epistatic interactions of CRISPRs and cas clusters in genomes and their mobile genetic elements

13 May 2019

publication

A matter of background: DNA repair pathways as a possible cause for the sparse distribution of CRISPR-Cas systems in bacteria

02 Jul 2018

publication

CRISPRCasFinder, an update of CRISRFinder, includes a portable version, enhanced performance and integrates search for Cas proteins

01 Jul 2018

publication

Viruses cooperate to defeat bacteria.

12 Dec 2017

publication

A little guide for advanced search:

Timeline

A human homolog of SIR2 antiphage proteins mediates immunity via the Toll-like receptor pathway

Sedentary chromosomal integrons as biobanks of bacterial antiphage defense systems.

Evolutionary origins of archaeal and eukaryotic RNA-guided RNA modification in bacterial IS110 transposons.

Strain phylogroup and environmental constraints shape Escherichia coli dynamics and diversity over a 20-year human gut time series

Exploring the diversity of anti-defense systems across prokaryotes, phages and mobile genetic elements.

Prediction of strain level phage-host interactions across the Escherichia genus using only genomic information.

Conservation of antiviral systems across domains of life reveals immune genes in humans

A virally encoded tRNA neutralizes the PARIS antiviral defence system

Viperin immunity evolved across the tree of life through serial innovations on a conserved scaffold

The immune modules conserved across the tree of life: Towards a definition of ancestral immunity.

Seminar Joe Bondy-Denomy “A bacteriophage that evades immune nucleases by pretending to be a eukaryote”

A Comprehensive Resource for Exploring Antiphage Defense: DefenseFinder Webservice, Wiki and Databases

Many congratulations to Aude Bernheim, appointed as Member of the Presidential Council of Science

“GG department seminar: Carrie Shaffer (University of Kentucky, USA) ; “New insights into ancient mechanisms underscoring trans-kingdom DNA conjugation” ; Thursday 7 December @ 11.00 am ; Auditorium François Jacob

Immunité bactérienne : à la découverte d’un nouveau monde [Bacterial immunity: Uncovering a new world]

The highly diverse antiphage defence systems of bacteria.

The twilight zone between transposons and endogenous retroviruses

Genomic characterization of the antiviral arsenal of Actinobacteria.

Molecular diversity of microbes

Synergy and regulation of antiphage systems: toward the existence of a bacterial immune system?

An expanded arsenal of immune systems that protect bacteria from phages.

Multiple phage resistance systems inhibit infection via SIR2-dependent NAD+ depletion.

CRISPR-Cas and restriction-modification team up to achieve long-term immunity.

Phages and their satellites encode hotspots of antiviral systems

Systematic and quantitative view of the antiviral arsenal of prokaryotes.

Evolutionary and mechanistic diversity of Type I-F CRISPR-associated transposons.

Systematic and quantitative view of the antiviral arsenal of prokaryotes

Prokaryotic viperins produce diverse antiviral molecules.

Bacterial Retrons Function In Anti-Phage Defense.

The pan-immune system of bacteria: antiviral defence as a community resource.

Atypical organizations and epistatic interactions of CRISPRs and cas clusters in genomes and their mobile genetic elements

A matter of background: DNA repair pathways as a possible cause for the sparse distribution of CRISPR-Cas systems in bacteria

CRISPRCasFinder, an update of CRISRFinder, includes a portable version, enhanced performance and integrates search for Cas proteins

Viruses cooperate to defeat bacteria.

Inhibition of NHEJ repair by type II-A CRISPR-Cas systems in bacteria