Timeline

Stephan Fischer

Research Engineer

20 Mar 2024

project

ANR-JCJC: Mechanisms defining functional heterogeneity of anatomically distinct myogenic populations (MUSE)

17 Jul 2023

course

Bioinformatics program for PhD students 2023 2024

19 Nov 2021

publication

How many markers are needed to robustly determine a cell’s type?

01 Oct 2021

publication

A transcriptomic and epigenomic cell atlas of the mouse primary motor cortex.

01 Oct 2021

publication

Cellular anatomy of the mouse primary motor cortex.

01 Oct 2021

publication

Comparative cellular analysis of motor cortex in human, marmoset and mouse.

01 Aug 2021

publication

Scaling up reproducible research for single-cell transcriptomics using MetaNeighbor.

21 Jul 2021

publication

Single-cell co-expression analysis reveals that transcriptional modules are shared across cell types in the brain.

01 Jul 2021

publication

Assessing the replicability of spatial gene expression using atlas data from the adult mouse brain.

01 Jun 2021

publication

Integrating barcoded neuroanatomy with spatial transcriptional profiling enables identification of gene correlates of projections.

01 Jan 2020

publication

The Surprising Creativity of Digital Evolution: A Collection of Anecdotes from the Evolutionary Computation and Artificial Life Research Communities.

01 Jan 2020

publication

Copolymerization of single-cell nucleic acids into balls of acrylamide gel.

30 Oct 2019

tool

Single Cell Transcriptomics, Epigenetic and Genomics (GEX, ATAC, ADT, Multiome)

17 Oct 2019

publication

High-Throughput Mapping of Long-Range Neuronal Projection Using In Situ Sequencing.

01 Sep 2019

publication

Automated generation of bacterial resource allocation models.

28 Mar 2018

team

Expertise group: GORE – Genome Organization Regulation and Expression

23 Nov 2017

publication

The bacterial interlocked process ONtology (BiPON): a systemic multi-scale unified representation of biological processes in prokaryotes.

26 Jun 2015

team

Bioinformatics and Biostatistics HUB

01 Sep 2014

publication

A little guide for advanced search:

Timeline

ANR-JCJC: Mechanisms defining functional heterogeneity of anatomically distinct myogenic populations (MUSE)

Bioinformatics program for PhD students 2023 2024

How many markers are needed to robustly determine a cell’s type?

A transcriptomic and epigenomic cell atlas of the mouse primary motor cortex.

Cellular anatomy of the mouse primary motor cortex.

Comparative cellular analysis of motor cortex in human, marmoset and mouse.

Scaling up reproducible research for single-cell transcriptomics using MetaNeighbor.

Single-cell co-expression analysis reveals that transcriptional modules are shared across cell types in the brain.

Assessing the replicability of spatial gene expression using atlas data from the adult mouse brain.

Integrating barcoded neuroanatomy with spatial transcriptional profiling enables identification of gene correlates of projections.

The Surprising Creativity of Digital Evolution: A Collection of Anecdotes from the Evolutionary Computation and Artificial Life Research Communities.

Copolymerization of single-cell nucleic acids into balls of acrylamide gel.

Single Cell Transcriptomics, Epigenetic and Genomics (GEX, ATAC, ADT, Multiome)

High-Throughput Mapping of Long-Range Neuronal Projection Using In Situ Sequencing.

Automated generation of bacterial resource allocation models.

Expertise group: GORE – Genome Organization Regulation and Expression

The bacterial interlocked process ONtology (BiPON): a systemic multi-scale unified representation of biological processes in prokaryotes.

Bioinformatics and Biostatistics HUB

A model for genome size evolution.