-
2024Impact of socioeconomic status on healthy immune responses in humans., Immunol Cell Biol 2024 Aug; 102(7): 618-629.
-
2024Lack of association between classical HLA genes and asymptomatic SARS-CoV-2 infection., HGG Adv 2024 Jul; 5(3): 100300.
-
2024MANOCCA: a robust and computationally efficient test of covariance in high-dimension multivariate omics data., Brief Bioinform 2024 May; 25(4): .
-
2024Higher COVID-19 pneumonia risk associated with anti-IFN-α than with anti-IFN-ω auto-Abs in children., J Exp Med 2024 Feb; 221(2): .
-
2024Smoking changes adaptive immunity with persistent effects., Nature 2024 Feb; 626(8000): 827-835.
-
2024Standardized high-dimensional spectral cytometry protocol and panels for whole blood immune phenotyping in clinical and translational studies., Cytometry A 2024 Feb; 105(2): 124-138.
-
2023Environmental variation and genetic diversity contribute to population differences in immune responses to SARS-CoV-2 and COVID-19 risk., Genes Immun 2023 Dec; (): .
-
2023Immune-response 3’UTR alternative polyadenylation quantitative trait loci contribute to variation in human complex traits and diseases., Nat Commun 2023 Dec; 14(1): 8347.
-
2023Unveiling Candida albicans intestinal carriage in healthy volunteers: the role of micro- and mycobiota, diet, host genetics and immune response., Gut Microbes 2023 Dec; 15(2): 2287618.
-
2023Autoantibodies against type I IFNs in humans with alternative NF-κB pathway deficiency., Nature 2023 Nov; 623(7988): 803-813.
-
2023Standardized high-dimensional spectral cytometry protocol and panels for whole blood immune phenotyping in clinical and translational studies., Cytometry A 2024 Feb; 105(2): 124-138.
-
2023A second update on mapping the human genetic architecture of COVID-19., Nature 2023 Sep; 621(7977): E7-E26.
-
2023Dissecting human population variation in single-cell responses to SARS-CoV-2, Nature, 2023, 53 (8), pp.e2250307. ⟨10.1038/s41586-023-06422-9⟩.
-
2023Integrated analysis of whole blood oxylipin and cytokine responses after bacterial, viral, and T cell stimulation reveals new immune networks., iScience 2023 Aug; 26(8): 107422.
-
2023Humans with inherited MyD88 and IRAK-4 deficiencies are predisposed to hypoxemic COVID-19 pneumonia., J Exp Med 2023 May; 220(5): .
-
2023Rare predicted loss-of-function variants of type I IFN immunity genes are associated with life-threatening COVID-19., Genome Med 2023 Apr; 15(1): 22.
-
2023Inherited and acquired errors of type I interferon immunity govern susceptibility to COVID-19 and multisystem inflammatory syndrome in children., J Allergy Clin Immunol 2023 Apr; 151(4): 832-840.
-
2023Ancient DNA as a tool for medical research., Nat Med 2023 Mar; (): .
-
2023Genetic adaptation to pathogens and increased risk of inflammatory disorders in post-Neolithic Europe., Cell Genom 2023 Feb; 3(2): 100248.
-
2023High-throughput droplet-based analysis of influenza A virus genetic reassortment by single-virus RNA sequencing., Proc Natl Acad Sci U S A 2023 Feb; 120(6): e2211098120.
-
2023[Paleogenomics and the evolution of the human immune system over the last ten millennia]., Med Sci (Paris) 2023 ; 39(6-7): 496-499.
-
2023Unravelling the determinants of human health in French Polynesia: the MATAEA project., Front Epidemiol 2023 ; 3(): 1201038.
-
2022Inborn errors of OAS-RNase L in SARS-CoV-2-related multisystem inflammatory syndrome in children., Science 2022 Dec; (): eabo3627.
-
2022CIITA promoter polymorphism impairs monocytes HLA-DR expression in patients with septic shock., iScience 2022 Nov; 25(11): 105291.
-
2022The immune factors driving DNA methylation variation in human blood., Nat Commun 2022 Oct; 13(1): 5895.
-
2022Decoding the Human Genetic and Immunological Basis of COVID-19 mRNA Vaccine-Induced Myocarditis., J Clin Immunol 2022 Oct; 42(7): 1354-1359.
-
2022The genomic landscape of contemporary western Remote Oceanians., Curr Biol 2022 Sep; (): .
-
2022Recessive inborn errors of type I IFN immunity in children with COVID-19 pneumonia., J Exp Med 2022 Aug; 219(8): .
-
2022Respiratory viral infections in otherwise healthy humans with inherited IRF7 deficiency., J Exp Med 2022 Jul; 219(7): .
-
2022The genetic and evolutionary determinants of COVID-19 susceptibility., Eur J Hum Genet 2022 Jun; (): .
-
2022Early IFNβ secretion determines variable downstream IL-12p70 responses upon TLR4 activation., Cell Rep 2022 Jun; 39(13): 110989.
-
2022Variability of Primary Sjögren’s Syndrome Is Driven by Interferon-α and Interferon-α Blood Levels Are Associated With the Class II HLA-DQ Locus., Arthritis Rheumatol 2022 Dec; 74(12): 1991-2002.
-
2022Paleogenomics: The demographic past of prehistoric Europeans., Curr Biol 2022 Jun; 32(11): R535-R538.
-
2022A loss-of-function IFNAR1 allele in Polynesia underlies severe viral diseases in homozygotes., J Exp Med 2022 Jun; 219(6): .
-
2022The risk of COVID-19 death is much greater and age dependent with type I IFN autoantibodies, Proceedings of the National Academy of Sciences of the United States of America, 2022, 119 (21), pp.349-363. ⟨10.1073/pnas.2200413119⟩.
-
2022Innate immune pathways act synergistically to constrain RNA virus evolution in Drosophila melanogaster., Nat Ecol Evol 2022 05; 6(5): 565-578.
-
2022Rhesus negative males have an enhanced IFNγ-mediated immune response to influenza A virus., Genes Immun 2022 Apr; 23(2): 93-98.
-
2022Studying severe long COVID to understand post-infectious disorders beyond COVID-19., Nat Med 2022 Apr; (): .
-
2022Integrative genetic and immune cell analysis of plasma proteins in healthy donors identifies novel associations involving primary immune deficiency genes., Genome Med 2022 Mar; 14(1): 28.
-
2022The genomic signatures of natural selection in admixed human populations., Am J Hum Genet 2022 Mar; (): .
-
2022Human genetic and immunological determinants of critical COVID-19 pneumonia., Nature 2022 Jan; (): .
-
2022The risk of COVID-19 death is much greater and age-dependent with type I IFN autoantibodies., Res Sq 2022 Jan; (): .
-
2021Sporadic occurrence of recent selective sweeps from standing variation in humans as revealed by an approximate Bayesian computation approach., Genetics 2021 Dec; 219(4): .
-
2021Author Correction: A global effort to dissect the human genetic basis of resistance to SARS-CoV-2 infection., Nat Immunol 2021 Nov; (): .
-
2021A global effort to dissect the human genetic basis of resistance to SARS-CoV-2 infection., Nat Immunol 2021 Oct; (): .
-
2021Ancestral diversity is limited in published T cell receptor sequencing studies., Immunity 2021 Oct; 54(10): 2177-2179.
-
2021New insights into human immunity from ancient genomics, Current Opinion in Immunology, 2021, 72, pp.116-125. ⟨10.1016/j.coi.2021.04.006⟩.
-
2021Towards a functional understanding of adaptive phenotypes in humans., J Anthropol Sci 2021 Sep; 99(): .
-
2021Autoantibodies neutralizing type I IFNs are present in ~4% of uninfected individuals over 70 years old and account for ~20% of COVID-19 deaths., Sci Immunol 2021 Aug; 6(62): .
-
2021X-linked recessive TLR7 deficiency in ~1% of men under 60 years old with life-threatening COVID-19., Sci Immunol 2021 08; 6(62): .
-
2021Reconstructing 50,000 years of human history from our DNA: lessons from modern genomics., C R Biol 2021 Jul; 344(2): 177-187.
-
2021Diversity in immunogenomics: the value and the challenge., Nat Methods 2021 May; (): .
-
2021Genomic insights into population history and biological adaptation in Oceania., Nature 2021 Apr; 592(7855): 583-589.
-
2021Genetic origins, singularity, and heterogeneity of Basques., Curr Biol 2021 Mar; (): .
-
2021The counteracting effects of demography on functional genomic variation: the Roma paradigm., Mol Biol Evol 2021 Mar; (): .
-
2021Human ancient DNA analyses reveal the high burden of tuberculosis in Europeans over the last 2,000 years., Am J Hum Genet 2021 Mar; 108(3): 517-524.
-
2021Genome-wide association study of resistance to Mycobacterium tuberculosis infection identifies a locus at 10q26.2 in three distinct populations., PLoS Genet 2021 Mar; 17(3): e1009392.
-
2021Dangerous liaisons: human genetic adaptation to infectious agents., C R Biol 2021 Feb; 343(3): 297-309.
-
2021Negative selection on human genes underlying inborn errors depends on disease outcome and both the mode and mechanism of inheritance., Proc Natl Acad Sci U S A 2021 Jan; 118(3): .
-
2021Gut microbiome stability and dynamics in healthy donors and patients with non-gastrointestinal cancers., J Exp Med 2021 Jan; 218(1): .
-
2021Single-Cell and Bulk RNA-Sequencing Reveal Differences in Monocyte Susceptibility to Influenza A Virus Infection Between Africans and Europeans., Front Immunol 2021 ; 12(): 768189.
-
2020Human T-bet Governs Innate and Innate-like Adaptive IFN-γ Immunity against Mycobacteria., Cell 2020 12; 183(7): 1826-1847.e31.
-
2020Associations between untargeted plasma metabolomic signatures and gut microbiota composition in the Milieu Intérieur population of healthy adults., Br J Nutr 2020 Dec; (): 1-11.
-
2020Autoantibodies against type I IFNs in patients with life-threatening COVID-19., Science 2020 Oct; 370(6515): .
-
2020Editorial overview: Evolutionary and systems immunology – methods to understand human immune system variation, Current Opinion in Immunology, 2020, 65, ⟨10.1016/j.coi.2020.11.001⟩.
-
2020Population variation in miRNAs and isomiRs and their impact on human immunity to infection., Genome Biol. 2020 Jul; 21(1): 187.
-
2020Recent common origin, reduced population size, and marked admixture have shaped European Roma genomes., Mol. Biol. Evol. 2020 Jun; (): .
-
2020A trans-eQTL network regulates osteoclast multinucleation and bone mass., Elife 2020 06; 9(): .
-
2020Common homozygosity for predicted loss-of-function variants reveals both redundant and advantageous effects of dispensable human genes., Proc. Natl. Acad. Sci. U.S.A. 2020 Jun; 117(24): 13626-13636.
-
2020A Global Effort to Define the Human Genetics of Protective Immunity to SARS-CoV-2 Infection., Cell 2020 06; 181(6): 1194-1199.
-
2020Evolutionary and population (epi)genetics of immunity to infection., Hum. Genet. 2020 Jun; 139(6-7): 723-732.
-
2020Associations between consumption of dietary fibers and the risk of cardiovascular diseases, cancers, type 2 diabetes, and mortality in the prospective NutriNet-Santé cohort., Am. J. Clin. Nutr. 2020 May; (): .
-
2020Genetic susceptibility to severe childhood asthma and rhinovirus-C maintained by balancing selection in humans for 150 000 years., Hum. Mol. Genet. 2020 Mar; 29(5): 736-744.
-
2020Quantitative genetic analysis deciphers the impact of cis and trans regulation on cell-to-cell variability in protein expression levels, PLoS Genet. 2020 Mar;16(3):e1008686.
-
2020Functional consequences of archaic introgression and their impact on fitness, Genome Biol. 2020 01;21(1):3.
-
2019Human SNORA31 variations impair cortical neuron-intrinsic immunity to HSV-1 and underlie herpes simplex encephalitis, Nat. Med. 2019 12;25(12):1873-1884.
-
2019Associations of autozygosity with a broad range of human phenotypes, Nat Commun 2019 10;10(1):4957.
-
2019A comprehensive assessment of demographic, environmental, and host genetic associations with gut microbiome diversity in healthy individuals., Microbiome 2019 Sep; 7(1): 130.
-
2019Counting Oceanians of Non-European, Non-Asian Descent (ONENA) in the South Pacific to Make Them Count in Global Health, Trop Med Infect Dis 2019 Aug;4(3).
-
2019Genomic Evidence for Local Adaptation of Hunter-Gatherers to the African Rainforest, Curr. Biol. 2019 Sep;29(17):2926-2935.e4.
-
2019Natural selection contributed to immunological differences between hunter-gatherers and agriculturalists, Nat Ecol Evol 2019 Aug;3(8):1253-1264.
-
2019A Call for Blood-In Human Immunology, Immunity 2019 Jun;50(6):1335-1336.
-
2019Impact and Evolutionary Determinants of Neanderthal Introgression on Transcriptional and Post-Transcriptional Regulation, Am. J. Hum. Genet. 2019 Jun;104(6):1241-1250.
-
2019Homozygosity for P1104A underlies tuberculosis in about 1% of patients in a cohort of European ancestry, Proc. Natl. Acad. Sci. U.S.A. 2019 May;.
-
2019Associations between usual diet and gut microbiota composition: results from the Milieu Intérieur cross-sectional study., Am J Clin Nutr 2019 May; 109(5): 1472-1483.
-
2019Defining the genetic and evolutionary architecture of alternative splicing in response to infection, Nat Commun 2019 04;10(1):1671.
-
2019Diversity of Killer Cell Ig-Like Receptor, HLA Class I, and Their Interactions in Seven Populations of Sub-Saharan Africans, J. Immunol. 2019 Mar;.
-
2019Human Immunology through the Lens of Evolutionary Genetics, Cell 2019 Mar;177(1):184-199.
-
2019Recent Adaptive Acquisition by African Rainforest Hunter-Gatherers of the Late Pleistocene Sickle-Cell Mutation Suggests Past Differences in Malaria Exposure, Am. J. Hum. Genet. 2019 Mar;104(3):553-561.
-
2018Blacklisting variants common in private cohorts but not in public databases optimizes human exome analysis, Proc. Natl. Acad. Sci. U.S.A. 2019 Jan;116(3):950-959.
-
2018Human IFN-γ immunity to mycobacteria is governed by both IL-12 and IL-23., Sci Immunol 2018 12; 3(30): .
-
2018Tuberculosis and impaired IL-23-dependent IFN-γ immunity in humans homozygous for a common missense variant, Sci Immunol 2018 Dec;3(30).
-
2018Exploring the genetic basis of human population differences in DNA methylation and their causal impact on immune gene regulation., Genome Biol 2018 12; 19(1): 222.
-
2018The demographic and adaptive history of central African hunter-gatherers and farmers, Current Opinion in Genetics and Development, 2018, 53, pp.90-97. ⟨10.1016/j.gde.2018.07.008⟩.
-
2018Editorial overview: The history, geography and adaptation of human genes: A tribute to L. Luca Cavalli-Sforza, Current Opinion in Genetics and Development, 2018, 53, pp.iii-v. ⟨10.1016/j.gde.2018.11.004⟩.
-
2018Polygenic adaptation and convergent evolution on growth and cardiac genetic pathways in African and Asian rainforest hunter-gatherers, Proc. Natl. Acad. Sci. U.S.A. 2018 Nov;115(48):E11256-E11263.
-
2018Systematic evaluation of DNA methylation age estimation with common preprocessing methods and the Infinium MethylationEPIC BeadChip array, Clin Epigenetics 2018 Oct;10(1):123.
-
2018Human thymopoiesis is influenced by a common genetic variant within the TCRA-TCRD locus., Sci Transl Med 2018 Sep; 10(457): .
-
2018Host and viral genetic diversity can help explain mortality during the 1918-21 influenza pandemic in the Pacific region, Lancet Infect Dis 2018 Aug;18(8):833-834.
-
2018Human genetic variants and age are the strongest predictors of humoral immune responses to common pathogens and vaccines., Genome Med 2018 Jul; 10(1): 59.
-
2018Publisher Correction: Natural variation in the parameters of innate immune cells is preferentially driven by genetic factors., Nat Immunol 2018 06; 19(6): 645.
-
2018IRF4 haploinsufficiency in a family with Whipple’s disease, Elife 2018 Mar;7.
-
2018The demographic history and mutational load of African hunter-gatherers and farmers, Nat Ecol Evol 2018 Apr;2(4):721-730.
-
2018Natural variation in the parameters of innate immune cells is preferentially driven by genetic factors., Nat Immunol 2018 Mar; 19(3): 302-314.
-
2018Distinctive roles of age, sex, and genetics in shaping transcriptional variation of human immune responses to microbial challenges., Proc Natl Acad Sci U S A 2018 Jan; 115(3): E488-E497.
-
2017miR-222 isoforms are differentially regulated by type-I interferon, RNA 2017 Dec;.
-
2017The Genetic Legacy of the Indian Ocean Slave Trade: Recent Admixture and Post-admixture Selection in the Makranis of Pakistan, Am. J. Hum. Genet. 2017 Dec;101(6):977-984.
-
2017Deconvolution of the Response to Bacillus Calmette-Guérin Reveals NF-κB-Induced Cytokines As Autocrine Mediators of Innate Immunity, Front Immunol 2017;8:796.
-
2017Trends in DNA Methylation with Age Replicate Across Diverse Human Populations, Genetics 2017 07;206(3):1659-1674.
-
2017Living in an adaptive world: Genomic dissection of the genus Homo and its immune response, J. Exp. Med. 2017 Apr;214(4):877-894.
-
2017Aboriginal Australian mitochondrial genome variation – an increased understanding of population antiquity and diversity, Sci Rep 2017 Mar;7:43041.
-
2017[Innate immunity and human diseases: from archaic introgression to natural selection], Med Sci (Paris) 2016 Dec;32(12):1079-1086.
-
2016Mitochondrial DNA diversity of present-day Aboriginal Australians and implications for human evolution in Oceania, J. Hum. Genet. 2017 Mar;62(3):343-353.
-
2016Understanding rare and common diseases in the context of human evolution, Genome Biol. 2016 Nov;17(1):225.
-
2016Genetic Adaptation and Neandertal Admixture Shaped the Immune System of Human Populations, Cell 2016 Oct;167(3):643-656.e17.
-
2016Might Interspecific Interactions between Pathogens Drive Host Evolution? The Case of Plasmodium Species and Duffy-Negativity in Human Populations, Trends Parasitol. 2016 Oct;.
-
2016Dual T cell- and B cell-intrinsic deficiency in humans with biallelic RLTPR mutations, J. Exp. Med. 2016 10;213(11):2413-2435.
-
2016Standardized Whole-Blood Transcriptional Profiling Enables the Deconvolution of Complex Induced Immune Responses, DOI: http://dx.doi.org/10.1016/j.celrep.2016.08.011 show.
-
2016An epigenetic clock analysis of race/ethnicity, sex, and coronary heart disease, Genome Biol. 2016 Aug;17(1):171.
-
2016Genetic and epigenetic variation of human populations: An adaptive tale, C. R. Biol. 2016 Jul-Aug;339(7-8):278-83.
-
2016The mutation significance cutoff: gene-level thresholds for variant predictions, Nat. Methods 2016 Feb;13(2):109-10.
-
2016Genomic Signatures of Selective Pressures and Introgression from Archaic Hominins at Human Innate Immunity Genes, Am. J. Hum. Genet. 2016 Jan;98(1):5-21.
-
2015The epigenomic landscape of African rainforest hunter-gatherers and farmers, Nat Commun 2015 Nov;6:10047.
-
2015Antiquity and diversity of aboriginal Australian Y-chromosomes, Am. J. Phys. Anthropol. 2016 Mar;159(3):367-81.
-
2015The human gene damage index as a gene-level approach to prioritizing exome variants, Proc. Natl. Acad. Sci. U.S.A. 2015 Nov;112(44):13615-20.
-
2015Genetic Diversity in the Lesser Antilles and Its Implications for the Settlement of the Caribbean Basin, PLoS ONE 2015;10(10):e0139192.
-
2015Origins, admixture and founder lineages in European Roma, Eur. J. Hum. Genet. 2016 Jun;24(6):937-43.
-
2015Genome-wide signatures of male-mediated migration shaping the Indian gene pool, J. Hum. Genet. 2015 May;.
-
2015Automated flow cytometric analysis across large numbers of samples and cell types., Clin Immunol 2015 Apr; 157(2): 249-60.
-
2015Semi-automated and standardized cytometric procedures for multi-panel and multi-parametric whole blood immunophenotyping., Clin Immunol 2015 Apr; 157(2): 261-76.
-
2015The Milieu Intérieur study – an integrative approach for study of human immunological variance., Clin Immunol 2015 Apr; 157(2): 277-93.
-
2015bacterial infection drives the expression dynamics of microRNAs and their isomiRs, PLoS Genet. 2015 Mar;11(3):e1005064.
-
2015Y-chromosome descent clusters and male differential reproductive success: young lineage expansions dominate Asian pastoral nomadic populations, Eur. J. Hum. Genet. 2015 Jan;.
-
2014Editorial Overview: immunogenetics and transplantation: bringing evolution and genomics to human immunology, Curr. Opin. Immunol. 2014 Oct;30:v-vii.
-
2014Preserving immune diversity through ancient inheritance and admixture, Curr. Opin. Immunol. 2014 Oct;30:79-84.
-
2014The Red Queen’s long race: human adaptation to pathogen pressure, Curr. Opin. Genet. Dev. 2014 Dec;29:31-8.
-
2014Adaptive, convergent origins of the pygmy phenotype in African rainforest hunter-gatherers, Proc. Natl. Acad. Sci. U.S.A. 2014 09;111(35):E3596-603.
-
2014Genetic diversity in Puerto Rico and its implications for the peopling of the Island and the West Indies, Am. J. Phys. Anthropol. 2014 Nov;155(3):352-68.
-
2014Geographic population structure analysis of worldwide human populations infers their biogeographical origins, Nat Commun 2014;5:3513.
-
2014HGCS: an online tool for prioritizing disease-causing gene variants by biological distance, BMC Genomics 2014;15:256.
-
2014Exploring the occurrence of classic selective sweeps in humans using whole-genome sequencing data sets, Mol. Biol. Evol. 2014 Jul;31(7):1850-68.
-
2014Functional analysis via standardized whole-blood stimulation systems defines the boundaries of a healthy immune response to complex stimuli., Immunity, 2014, 40 (3), pp.436-50. ⟨10.1016/j.immuni.2014.03.002⟩.
-
2014Mitochondrial genome sequencing in Mesolithic North East Europe Unearths a new sub-clade within the broadly distributed human haplogroup C1, PLoS ONE 2014;9(2):e87612.
-
2014A genomic portrait of the genetic architecture and regulatory impact of microRNA expression in response to infection, Genome Res. 2014 May;24(5):850-9.
-
2014From cheek swabs to consensus sequences: an A to Z protocol for high-throughput DNA sequencing of complete human mitochondrial genomes, BMC Genomics 2014;15:68.
-
2014The impact of agricultural emergence on the genetic history of African rainforest hunter-gatherers and agriculturalists, Nat Commun 2014;5:3163.
-
2013Ancient DNA reveals key stages in the formation of central European mitochondrial genetic diversity, Science 2013 Oct;342(6155):257-61.
-
2013Immunology taught by human genetics, Cold Spring Harb. Symp. Quant. Biol. 2013;78:157-72.
-
2013Human genetic data reveal contrasting demographic patterns between sedentary and nomadic populations that predate the emergence of farming, Mol. Biol. Evol. 2013 Dec;30(12):2629-44.
-
2013Sequencing Y chromosomes resolves discrepancy in time to common ancestor of males versus females, Science 2013 Aug;341(6145):562-5.
-
2013Different selective pressures shape the evolution of Toll-like receptors in human and African great ape populations, Hum. Mol. Genet. 2013 Dec;22(23):4829-40.
-
2013Uniparental markers in Italy reveal a sex-biased genetic structure and different historical strata, PLoS ONE 2013;8(5):e65441.
-
2013Evidence for polygenic adaptation to pathogens in the human genome, Mol. Biol. Evol. 2013 Jul;30(7):1544-58.
-
2013Ribosomal protein SA haploinsufficiency in humans with isolated congenital asplenia, Science 2013 May;340(6135):976-8.
-
2013The genetics of innate immunity sensors and human disease, Int. Rev. Immunol. 2013 Apr;32(2):157-208.
-
2013The human gene connectome as a map of short cuts for morbid allele discovery, Proc. Natl. Acad. Sci. U.S.A. 2013 Apr;110(14):5558-63.
-
2013Population genetic tools for dissecting innate immunity in humans, Nat. Rev. Immunol. 2013 Apr;13(4):280-93.
-
2013Ancient DNA reveals prehistoric gene-flow from siberia in the complex human population history of North East Europe, PLoS Genet. 2013;9(2):e1003296.
-
2013Y-chromosome and mtDNA genetics reveal significant contrasts in affinities of modern Middle Eastern populations with European and African populations, PLoS ONE 2013;8(1):e54616.
-
2013The impact of natural selection on health and disease: uses of the population genetics approach in humans, Evol Appl 2013 Jun;6(4):596-607.
-
2013Sociocultural behavior, sex-biased admixture, and effective population sizes in Central African Pygmies and non-Pygmies, Mol. Biol. Evol. 2013 Apr;30(4):918-37.
-
2013The GenoChip: a new tool for genetic anthropology, Genome Biol Evol 2013;5(5):1021-31.
-
2013Neolithic mitochondrial haplogroup H genomes and the genetic origins of Europeans, Nat Commun 2013;4:1764.
-
2013A genome-wide perspective of human diversity and its implications in infectious disease, Cold Spring Harb Perspect Med 2013 Jan;3(1):a012450.
-
2012[Population genetics and human immunity: the interferon paradigm], Med Sci (Paris) 2012 Dec;28(12):1095-101.
-
2012Population differentiation of southern Indian male lineages correlates with agricultural expansions predating the caste system, PLoS ONE 2012;7(11):e50269.
-
2012Contemporary paternal genetic landscape of Polish and German populations: from early medieval Slavic expansion to post-World War II resettlements, Eur. J. Hum. Genet. 2013 Apr;21(4):415-22.
-
2012Y-chromosome analysis in individuals bearing the Basarab name of the first dynasty of Wallachian kings, PLoS ONE 2012;7(7):e41803.
-
2012The evolutionary landscape of cytosolic microbial sensors in humans, Am. J. Hum. Genet. 2012 Jul;91(1):27-37.
-
2012Y-chromosome analysis reveals genetic divergence and new founding native lineages in Athapaskan- and Eskimoan-speaking populations, Proc. Natl. Acad. Sci. U.S.A. 2012 May;109(22):8471-6.
-
2012Clan, language, and migration history has shaped genetic diversity in Haida and Tlingit populations from Southeast Alaska, Am. J. Phys. Anthropol. 2012 Jul;148(3):422-35.
-
2012Afghanistan’s ethnic groups share a Y-chromosomal heritage structured by historical events, PLoS ONE 2012;7(3):e34288.
-
2012Evidence of pre-Roman tribal genetic structure in Basques from uniparentally inherited markers, Mol. Biol. Evol. 2012 Sep;29(9):2211-22.
-
2012The Basque paradigm: genetic evidence of a maternal continuity in the Franco-Cantabrian region since pre-Neolithic times, Am. J. Hum. Genet. 2012 Mar;90(3):486-93.
-
2012Genetics. Gene losses in the human genome, Science 2012 Feb;335(6070):806-7.
-
2012Mitochondrial origin of the matrilocal Mosuo people in China, Mitochondrial DNA 2012 Feb;23(1):13-9.
-
2011Evolutionary genetic dissection of human interferons, J. Exp. Med. 2011 Dec;208(13):2747-59.
-
2011Y-chromosome O3 haplogroup diversity in Sino-Tibetan populations reveals two migration routes into the eastern Himalayas, Ann. Hum. Genet. 2012 Jan;76(1):92-9.
-
2011Population variation in NAIP functional copy number confers increased cell death upon Legionella pneumophila infection, Hum. Immunol. 2012 Feb;73(2):196-200.
-
2011Recombination networks as genetic markers in a human variation study of the Old World, Hum. Genet. 2012 Apr;131(4):601-13.
-
2011Recombination gives a new insight in the effective population size and the history of the old world human populations, Mol. Biol. Evol. 2012 Jan;29(1):25-30.
-
2011Human migration through bottlenecks from Southeast Asia into East Asia during Last Glacial Maximum revealed by Y chromosomes, PLoS ONE 2011;6(8):e24282.
-
2011Genetic ancestry and indigenous heritage in a Native American descendant community in Bermuda, Am. J. Phys. Anthropol. 2011 Nov;146(3):392-405.
-
2011The selective footprints of viral pressures at the human RIG-I-like receptor family, Hum. Mol. Genet. 2011 Nov;20(22):4462-74.
-
2011Evolution of the TIR domain-containing adaptors in humans: swinging between constraint and adaptation, Mol. Biol. Evol. 2011 Nov;28(11):3087-97.
-
2011Lactase persistence in central Asia: phenotype, genotype, and evolution, Hum. Biol. 2011 Jun;83(3):379-92.
-
2011Functional characterization of naturally occurring genetic variants in the human TLR1-2-6 gene family, Hum. Mutat. 2011 Jun;32(6):643-52.
-
2011Parallel evolution of genes and languages in the Caucasus region, Mol. Biol. Evol. 2011 Oct;28(10):2905-20.
-
2011HTLV-2B strains, similar to those found in several Amerindian tribes, are endemic in central African Bakola Pygmies, J. Infect. Dis. 2011 May;203(9):1316-23.
-
2011An updated tree of Y-chromosome Haplogroup O and revised phylogenetic positions of mutations P164 and PK4, Eur. J. Hum. Genet. 2011 Sep;19(9):1013-5.
-
2011Evolutionary genetics evidence of an essential, nonredundant role of the IFN-γ pathway in protective immunity, Hum. Mutat. 2011 Jun;32(6):633-42.
-
2011Human TLRs and IL-1Rs in host defense: natural insights from evolutionary, epidemiological, and clinical genetics, Annu. Rev. Immunol. 2011;29:447-91.
-
2010Positive selection on mitochondrial M7 lineages among the Gelong people in Hainan, J. Hum. Genet. 2011 Mar;56(3):253-6.
-
2010The role played by natural selection on Mendelian traits in humans, Ann. N. Y. Acad. Sci. 2010 Dec;1214:1-17.
-
2010Influences of history, geography, and religion on genetic structure: the Maronites in Lebanon, Eur. J. Hum. Genet. 2011 Mar;19(3):334-40.
-
2010A mitochondrial revelation of early human migrations to the Tibetan Plateau before and after the last glacial maximum, Am. J. Phys. Anthropol. 2010 Dec;143(4):555-69.
-
2010A new method to reconstruct recombination events at a genomic scale, PLoS Comput. Biol. 2010;6(11):e1001010.
-
2010Life-threatening infectious diseases of childhood: single-gene inborn errors of immunity?, Ann. N. Y. Acad. Sci. 2010 Dec;1214:18-33.
-
2010Ancient DNA from European early neolithic farmers reveals their near eastern affinities, PLoS Biol. 2010;8(11):e1000536.
-
2010Insights into the demographic history of African Pygmies from complete mitochondrial genomes, Mol. Biol. Evol. 2011 Feb;28(2):1099-110.
-
2010In the heartland of Eurasia: the multilocus genetic landscape of Central Asian populations, Eur. J. Hum. Genet. 2011 Feb;19(2):216-23.
-
2010Genetic heritage and native identity of the Seaconke Wampanoag tribe of Massachusetts, Am. J. Phys. Anthropol. 2010 Aug;142(4):579-89.
-
2010Formulating a historical and demographic model of recent human evolution based on resequencing data from noncoding regions, PLoS ONE 2010;5(4):e10284.
-
2010Strong maternal Khoisan contribution to the South African coloured population: a case of gender-biased admixture, Am. J. Hum. Genet. 2010 Apr;86(4):611-20.
-
2010Parkinson’s disease-related LRRK2 G2019S mutation results from independent mutational events in humans, Hum. Mol. Genet. 2010 May;19(10):1998-2004.
-
2010Human herpesvirus 8, Southern Siberia, Emerging Infect. Dis. 2010 Mar;16(3):580-2.
-
2009Sexual inequality in tuberculosis, PLoS Med. 2009 Dec;6(12):e1000199.
-
2009Positively selected G6PD-Mahidol mutation reduces Plasmodium vivax density in Southeast Asians, Science 2009 Dec;326(5959):1546-9.
-
2009From evolutionary genetics to human immunology: how selection shapes host defence genes, Nat. Rev. Genet. 2010 Jan;11(1):17-30.
-
2009Study of human RIG-I polymorphisms identifies two variants with an opposite impact on the antiviral immune response, PLoS ONE 2009;4(10):e7582.
-
2009Evolutionary trajectories of primate genes involved in HIV pathogenesis, Mol. Biol. Evol. 2009 Dec;26(12):2865-75.
-
2009Genetic diversity and the emergence of ethnic groups in Central Asia, BMC Genet. 2009;10:49.
-
2009Geographical structure of the Y-chromosomal genetic landscape of the Levant: a coastal-inland contrast, Ann. Hum. Genet. 2009 Nov;73(Pt 6):568-81.
-
2009Evolutionary dynamics of human Toll-like receptors and their different contributions to host defense, PLoS Genet. 2009 Jul;5(7):e1000562.
-
2009Genetic and demographic implications of the Bantu expansion: insights from human paternal lineages, Mol. Biol. Evol. 2009 Jul;26(7):1581-9.
-
2009Inferring the demographic history of African farmers and pygmy hunter-gatherers using a multilocus resequencing data set, PLoS Genet. 2009 Apr;5(4):e1000448.
-
2009Signatures of purifying and local positive selection in human miRNAs, Am. J. Hum. Genet. 2009 Mar;84(3):316-27.
-
2009Origins and genetic diversity of pygmy hunter-gatherers from Western Central Africa, Curr. Biol. 2009 Feb;19(4):312-8.
-
2009Evolutionary genetics as a tool to target genes involved in phenotypes of medical relevance, Evol Appl 2009 Feb;2(1):71-80.
-
2008The genetic legacy of religious diversity and intolerance: paternal lineages of Christians, Jews, and Muslims in the Iberian Peninsula, Am. J. Hum. Genet. 2008 Dec;83(6):725-36.
-
2008A novel 154-bp deletion in the human mitochondrial DNA control region in healthy individuals, Hum. Mutat. 2008 Dec;29(12):1387-91.
-
2008Identifying genetic traces of historical expansions: Phoenician footprints in the Mediterranean, Am. J. Hum. Genet. 2008 Nov;83(5):633-42.
-
2008Dynamic nature of the proximal AZFc region of the human Y chromosome: multiple independent deletion and duplication events revealed by microsatellite analysis, Hum. Mutat. 2008 Oct;29(10):1171-80.
-
2008Sex-specific genetic structure and social organization in Central Asia: insights from a multi-locus study, PLoS Genet. 2008;4(9):e1000200.
-
2008Maximum-likelihood estimation of site-specific mutation rates in human mitochondrial DNA from partial phylogenetic classification, Genetics 2008 Nov;180(3):1511-24.
-
2008Multiple advantageous amino acid variants in the NAT2 gene in human populations, PLoS ONE 2008;3(9):e3136.
-
2008Protective role of DC-SIGN (CD209) neck-region alleles with <5 repeat units in HIV-1 transmission, J. Infect. Dis. 2008 Jul;198(1):68-71.
-
2008Genetic traces of east-to-west human expansion waves in Eurasia, Am. J. Phys. Anthropol. 2008 Jul;136(3):309-17.
-
2008The dawn of human matrilineal diversity, Am. J. Hum. Genet. 2008 May;82(5):1130-40.
-
2008Y-chromosomal diversity in Lebanon is structured by recent historical events, Am. J. Hum. Genet. 2008 Apr;82(4):873-82.
-
2008Natural selection has driven population differentiation in modern humans, Nat. Genet. 2008 Mar;40(3):340-5.
-
2008Maternal traces of deep common ancestry and asymmetric gene flow between Pygmy hunter-gatherers and Bantu-speaking farmers, Proc. Natl. Acad. Sci. U.S.A. 2008 Feb;105(5):1596-601.
-
2008Demeter’s legacy: rapid changes to our genome imposed by diet, Trends Ecol. Evol. (Amst.) 2008 Feb;23(2):56-9.
-
2007Population genetic diversity of the NAT2 gene supports a role of acetylation in human adaptation to farming in Central Asia, Eur. J. Hum. Genet. 2008 Feb;16(2):243-51.
-
2007Immunology in natura: clinical, epidemiological and evolutionary genetics of infectious diseases, Nat. Immunol. 2007 Nov;8(11):1165-71.
-
2007Promoter and neck region length variation of DC-SIGN is not associated with susceptibility to tuberculosis in Tunisian patients, Hum. Immunol. 2007 Nov;68(11):908-12.
-
2007TLR3 deficiency in patients with herpes simplex encephalitis, Science 2007 Sep;317(5844):1522-7.
-
2007The Genographic Project public participation mitochondrial DNA database, PLoS Genet. 2007 Jun;3(6):e104.
-
2007From social to genetic structures in central Asia, Curr. Biol. 2007 Jan;17(1):43-8.
-
2006Length variation of DC-SIGN and L-SIGN neck-region has no impact on tuberculosis susceptibility, Hum. Immunol. 2007 Feb;68(2):106-12.
-
2006DC-SIGNR neck-region polymorphisms and HIV-1 susceptibility: From population stratification to a possible advantage of the 7/5 heterozygous genotype, J. Infect. Dis. 2006 Oct;194(8):1184-5; author reply 1185-7.
-
2006Evolutionary insights into the high worldwide prevalence of MBL2 deficiency alleles, Hum. Mol. Genet. 2006 Sep;15(17):2650-8.
-
2006Towards a crucial role for DC-SIGN in tuberculosis and beyond, Trends Microbiol. 2006 Sep;14(9):383-7.
-
2006Sub-Saharan African coding sequence variation and haplotype diversity at the NAT2 gene, Hum. Mutat. 2006 Jul;27(7):720.
-
2006DC-SIGN interacts with Mycobacterium leprae but sequence variation in this lectin is not associated with leprosy in the Pakistani population, Hum. Immunol. 2006 Jan-Feb;67(1-2):102-7.
-
2006Horizontal transfer of a virulence operon to the ancestor of Mycobacterium tuberculosis, Mol. Biol. Evol. 2006 Jun;23(6):1129-35.
-
2006Deciphering the ancient and complex evolutionary history of human arylamine N-acetyltransferase genes, Am. J. Hum. Genet. 2006 Mar;78(3):423-36.
-
2006The matrilineal ancestry of Ashkenazi Jewry: portrait of a recent founder event, Am. J. Hum. Genet. 2006 Mar;78(3):487-97.
-
2006Promoter variation in the DC-SIGN-encoding gene CD209 is associated with tuberculosis, PLoS Med. 2006 Feb;3(2):e20.
-
2006[Natural selection of DC-SIGN and its homologues L-SIGN and mSIGNR1 in pathogen recognition and innate immunity], Med Sci (Paris) 2006 Jan;22(1):29-32.
-
2005The heritage of pathogen pressures and ancient demography in the human innate-immunity CD209/CD209L region, Am. J. Hum. Genet. 2005 Nov;77(5):869-86.
-
2005The Tyr978X BRCA1 mutation: occurrence in non-Jewish Iranians and haplotype in French-Canadian and non-Ashkenazi Jews, Fam. Cancer 2005;4(2):85-8.
-
2004The genetic or mythical ancestry of descent groups: lessons from the Y chromosome, Am. J. Hum. Genet. 2004 Dec;75(6):1113-6.
-
2004MtDNA evidence for a genetic bottleneck in the early history of the Ashkenazi Jewish population, Eur. J. Hum. Genet. 2004 May;12(5):355-64.
-
2004Where west meets east: the complex mtDNA landscape of the southwest and Central Asian corridor, Am. J. Hum. Genet. 2004 May;74(5):827-45.
-
2004Y-chromosomal STR haplotypes in Berber and Arabic-speaking populations from Morocco, Forensic Sci. Int. 2004 Feb;140(1):113-5.
-
2004Contrasting patterns of Y chromosome variation in Ashkenazi Jewish and host non-Jewish European populations, Hum. Genet. 2004 Mar;114(4):354-65.
-
2004Y chromosome polymorphisms in medicine, Ann. Med. 2004;36(8):573-83.
-
2003From surnames to the history of Y chromosomes: the Sardinian population as a paradigm, Eur. J. Hum. Genet. 2003 Oct;11(10):802-7.
-
2003Male reproductive function and the human Y chromosome: is selection acting on the Y?, Reprod. Biomed. Online 2003 Jul-Aug;7(1):17-23.
-
2003Genetic structure of Mediterranean populations revealed by Y-chromosome haplotype analysis, Am. J. Phys. Anthropol. 2003 Jun;121(2):157-71.
-
2003Y chromosome haplogroups: a correlation with testicular dysgenesis syndrome?, APMIS 2003 Jan;111(1):106-13; discussion 114.
-
2002Effects of transmission of Y chromosome AZFc deletions, Lancet 2002 Oct;360(9341):1222-4.
-
2002The fingerprint of phantom mutations in mitochondrial DNA data, Am. J. Hum. Genet. 2002 Nov;71(5):1150-60.
-
2002Y-chromosome analysis in Egypt suggests a genetic regional continuity in Northeastern Africa, Hum. Biol. 2002 Oct;74(5):645-58.
-
2001The Human Y Chromosome: The Biological Role of a “Functional Wasteland”, J. Biomed. Biotechnol. 2001;1(1):18-24.