• 2024
  Gu Q, Draheim M, Planchais C, He Z, Mu F, Gong S, Shen C, Zhu H, Zhivaki D, Shahin K, Collard JM, Su M, Zhang X, Mouquet H, Lo-Man R, Intestinal newborn regulatory B cell antibodies modulate microbiota communities., Cell Host Microbe 2024 Oct; 32(10): 1787-1804.e9.
• 2023
  Cui S, Xia T, Zhao J, Ren X, Wu T, Kameni M, Guo X, He L, Guo J, Duperray-Susini A, Levillayer F, Collard JM, Zhong J, Pan L, Tangy F, Vidalain PO, Zhou D, Jiu Y, Faure M, Wei Y, NDP52 mediates an antiviral response to hepatitis B virus infection through Rab9-dependent lysosomal degradation pathway., Nat Commun 2023 Dec; 14(1): 8440.
• 2023
  Devred I, Rambliere L, Herindrainy P, Andriamarohasina L, Harimanana A, Randrianirina F, Ratsima EH, Hivernaud D, Kermorvant-Duchemin E, Andrianirina ZZ, Abdou AY, Delarocque-Astagneau E, Guillemot D, Crucitti T, Collard JM, Huynh BT, Incidence and risk factors of neonatal bacterial infections: a community-based cohort from Madagascar (2018-2021)., BMC Infect Dis 2023 Oct; 23(1): 658.
• 2023
  Shahin K, Soleimani-Delfan A, He Z, Sansonetti P, Collard JM, Metagenomics revealed a correlation of gut phageome with autism spectrum disorder., Gut Pathog 2023 Aug; 15(1): 39.
• 2023
  Razanajatovo IM, Andrianomiadana L, Habib A, Randrianarisoa MM, Razafimanjato H, Rakotondrainipiana M, Andriantsalama P, Randriamparany R, Andriamandimby SF, Vonaesch P, Sansonetti PJ, Lacoste V, Randremanana RV, Collard JM, Heraud JM, On Behalf Of The Afribiota Investigators, Factors Associated with Carriage of Enteropathogenic and Non-Enteropathogenic Viruses: A Reanalysis of Matched Case-Control Data from the AFRIBIOTA Site in Antananarivo, Madagascar., Pathogens 2023 Aug; 12(8): .
• 2023
  Gay N, Rabenandrasana MAN, Panandiniaina HP, Rakotoninidrina MF, Ramahatafandry IT, Enouf V, Roger F, Collard JM, Cardinale E, Rieux A, Loire E, One Health compartment analysis of ESBL-producing Escherichia coli reveals multiple transmission events in a rural area of Madagascar., J Antimicrob Chemother 2023 Aug; 78(8): 1848-1858.
• 2023
  Ardillon A, Ramblière L, Kermorvant-Duchemin E, Sok T, Zo AZ, Diouf JB, Long P, Lach S, Sarr FD, Borand L, Cheysson F, Collard JM, Herindrainy P, de Lauzanne A, Vray M, Delarocque-Astagneau E, Guillemot D, Huynh BT, Inappropriate antibiotic prescribing and its determinants among outpatient children in 3 low- and middle-income countries: A multicentric community-based cohort study., PLoS Med 2023 Jun; 20(6): e1004211.
• 2023
  Rambliere L, de Lauzanne A, Diouf JB, Zo AZ, Landau M, Herindrainy P, Hivernaud D, Sarr FD, Sok T, Vray M, Collard JM, Borand L, Delarocque-Astagneau E, Guillemot D, Kermorvant-Duchemin E, Huynh BT, Stillbirths and neonatal mortality in LMICs: A community-based mother-infant cohort study., J Glob Health 2023 Apr; 13(): 04031.
• 2023
  Verrier F, de Lauzanne A, Diouf JN, Zo AZ, Ramblière L, Herindrainy P, Sarr FD, Sok T, Vray M, Collard JM, Borand L, Kermorvant-Duchemin E, Delarocque-Astagneau E, Guillemot D, Huynh BT, Vaccination Coverage and Risk Factors Associated With Incomplete Vaccination Among Children in Cambodia, Madagascar, and Senegal., Open Forum Infect Dis 2023 Apr; 10(4): ofad136.
• 2023
  Munk P, Brinch C, Møller FD, Petersen TN, Hendriksen RS, Seyfarth AM, Kjeldgaard JS, Svendsen CA, van Bunnik B, Berglund F, , Larsson DGJ, Koopmans M, Woolhouse M, Aarestrup FM, Author Correction: Genomic analysis of sewage from 101 countries reveals global landscape of antimicrobial resistance., Nat Commun 2023 Jan; 14(1): 178.
• 2023
  Vonaesch P, Billy V, Mann AE, Morien E, Habib A, Collard JM, Dédé M, Kapel N, Sansonetti PJ, Parfrey LW, The eukaryome of African children is influenced by geographic location, gut biogeography, and nutritional status., Microlife 2023 ; 4(): uqad033.
• 2023
  Guillo L, Flachaire B, Avouac J, Dong C, Nachury M, Bouguen G, Buisson A, Caillo L, Fumery M, Gilletta C, Hébuterne X, Lafforgue P, Laharie D, Mahé E, Marotte H, Nancey S, Ottaviani S, Salmon JH, Savoye G, Serrero M, Uzzan M, Viguier M, Richez C, Peyrin-Biroulet L, Seksik P, Pham T, Efficacy and safety of combination targeted therapies in immune-mediated inflammatory disease: the COMBIO study., Dig Liver Dis 2023 Jan; 55(1): 61-68.
• 2022
  Munk P, Brinch C, Møller FD, Petersen TN, Hendriksen RS, Seyfarth AM, Kjeldgaard JS, Svendsen CA, van Bunnik B, Berglund F, , Larsson DGJ, Koopmans M, Woolhouse M, Aarestrup FM, Genomic analysis of sewage from 101 countries reveals global landscape of antimicrobial resistance., Nat Commun 2022 Dec; 13(1): 7251.
• 2022
  Vonaesch P, Araújo JR, Gody JC, Mbecko JR, Sanke H, Andrianonimiadana L, Naharimanananirina T, Ningatoloum SN, Vondo SS, Gondje PB, Rodriguez-Pozo A, Rakotondrainipiana M, Kandou KJE, Nestoret A, Kapel N, Djorie SG, Finlay BB, Wegener Parfrey L, Collard JM, Randremanana RV, Sansonetti PJ, Stunted children display ectopic small intestinal colonization by oral bacteria, which cause lipid malabsorption in experimental models., Proc Natl Acad Sci U S A 2022 Oct; 119(41): e2209589119.
• 2022
  de Lauzanne A, Sreng N, Foucaud E, Sok T, Chon T, Yem C, Hak V, Heng S, Soda M, Gouali M, Nadimpalli M, Inghammar M, Rabenandrasana MAN, Collard JM, Vray M, Hello SL, Kerleguer A, Piola P, Delarocque-Astagneau E, Guillemot D, Huynh BT, Borand L, Prevalence and factors associated with faecal carriage of extended-spectrum β-lactamase-producing Enterobacterales among peripartum women in the community in Cambodia., J Antimicrob Chemother 2022 Sep; 77(10): 2658-2666.
• 2022
  Harimanana A, Rakotondrasoa A, Rivoarilala LO, Criscuolo A, Opatowski L, Rakotomanana EFN, Herindrainy P, Collard JM, Crucitti T, Huynh BT, Neonatal acquisition of extended-spectrum beta-lactamase-producing Enterobacteriaceae in the community of a low-income country (NeoLIC): protocol for a household cohort study in Moramanga, Madagascar., BMJ Open 2022 Sep; 12(9): e061463.
• 2022
  Vonaesch P, Winkel M, Kapel N, Nestoret A, Barbot-Trystram L, Pontoizeau C, Barouki R, Rakotondrainipiana M, Kandou K, Andriamanantena Z, Andrianonimiadana L, Habib A, Rodriguez-Pozo A, Hasan M, Vigan-Womas I, Collard JM, Gody JC, Djorie S, Sansonetti PJ, Randremanana RV, On Behalf Of The Afribiota Investigators, Putative Biomarkers of Environmental Enteric Disease Fail to Correlate in a Cross-Sectional Study in Two Study Sites in Sub-Saharan Africa., Nutrients 2022 Aug; 14(16): .
• 2022
  Randrianarisoa MM, Rakotondrainipiana M, Randriamparany R, Andriantsalama PV, Randrianarijaona A, Habib A, Robinson A, Raharimalala L, Hunald FA, Etienne A, Collard JM, Randrianirina F, Barouki R, Pontoizeau C, Nestoret A, Kapel N, Sansonetti P, Vonaesch P, Randremanana RV, Factors associated with anaemia among preschool- age children in underprivileged neighbourhoods in Antananarivo, Madagascar., BMC Public Health 2022 Jul; 22(1): 1320.
• 2022
  Collard JM, Andrianonimiadana L, Habib A, Rakotondrainipiana M, Andriantsalama P, Randriamparany R, Rabenandrasana MAN, Weill FX, Sauvonnet N, Randremanana RV, Guillemot V, Vonaesch P, Sansonetti PJ, High prevalence of small intestine bacteria overgrowth and asymptomatic carriage of enteric pathogens in stunted children in Antananarivo, Madagascar., PLoS Negl Trop Dis 2022 May; 16(5): e0009849.
• 2022
  Rakotondrasoa A, Andrianonimiadana LM, Rahajandraibe S, Razafimahatratra S, Andrianaivoarimanana V, Rahelinirina S, Crucitti T, Brisse S, Jeannoda V, Rajerison M, Collard JM, Characterization of Klebsiella pneumoniae isolated from patients suspected of pulmonary or bubonic plague during the Madagascar epidemic in 2017., Sci Rep 2022 Apr; 12(1): 6871.
• 2022
  Rambliere L, Kermorvant-Duchemin E, de Lauzanne A, Collard JM, Herindrainy P, Vray M, Garin B, Zo AZ, Rasoanaivo F, Rakotoarimanana Feno Manitra J, Raheliarivao TB, Diouf JN, Ngo V, Lach S, Long P, Borand L, Sok T, Abdou AY, Padget M, Madec Y, Guillemot D, Delarocque-Astagneau E, Huynh BT, , Excess risk of subsequent infection in hospitalized children from a community cohort study in Cambodia and Madagascar., Int J Epidemiol 2022 Oct; 51(5): 1421-1431.
• 2022
  Shahin K, Zhang L, Mehraban MH, Collard JM, Hedayatkhah A, Mansoorianfar M, Soleimani-Delfan A, Wang R, Clinical and experimental bacteriophage studies: Recommendations for possible approaches for standing against SARS-CoV-2., Microb Pathog 2022 Mar; 164(): 105442.
• 2022
  Razafimahatratra SL, Menezes A, Wesolowski A, Rafetrarivony L, Cauchemez S, Razafindratsimandresy R, Harimanana A, Crucitti T, Collard JM, Metcalf CJE, , Leveraging serology to titrate immunisation programme functionality for diphtheria in Madagascar., Epidemiol Infect 2022 Jan; 150(): e39.
• 2022
  Zo Andriamanantena, Fanirisoa Randrianarisaona, Maheninasy Rakotondrainipiana, Prisca Andriantsalama, Ravaka Randriamparany, Rindra Randremanana, Frédérique Randrianirina, Sophie Novault, Darragh Duffy, François Huetz, Milena Hasan, Matthieu Schoenhals, Philippe Sansonetti, Pascale Vonaesch, Inès Vigan‑womas, The Afribiota Investigators, Changes in Systemic Regulatory T Cells, Effector T Cells, and Monocyte Populations Associated With Early-Life Stunting, Frontiers in Immunology, 2022, 13, pp.864084. ⟨10.3389/fimmu.2022.864084⟩.
• 2021
  Huynh BT, Kermorvant-Duchemin E, Chheang R, Randrianirina F, Seck A, Hariniaina Ratsima E, Andrianirina ZZ, Diouf JB, Abdou AY, Goyet S, Ngo V, Lach S, Pring L, Sok T, Padget M, Sarr FD, Borand L, Garin B, Collard JM, Herindrainy P, de Lauzanne A, Vray M, Delarocque-Astagneau E, Guillemot D, , , Severe bacterial neonatal infections in Madagascar, Senegal, and Cambodia: A multicentric community-based cohort study., PLoS Med 2021 Sep; 18(9): e1003681.
• 2021
  Pascale Vonaesch, Serge Ghislain Djorie, Kaleb Jephté Estimé Kandou, Maheninasy Rakotondrainipiana, Laura Schaeffer, Prisca Vega Andriatsalama, Ravaka Randriamparany, Bolmbaye Privat Gondje, Synthia Nigatoloum, Sonia Sandrine Vondo, Aurélie Etienne, Annick Robinson, Francis Allen Hunald, Lisette Raharimalala, Tamara Giles-Vernick, Laura Tondeur, Frédérique Randrianirina, Alexandra Bastaraud, Jean-Chrysostome Gody, Philippe Jean Sansonetti, Rindra Vatosoa Randremanana, The Afribiota Investigators, Factors Associated with Stunted Growth in Children Under Five Years in Antananarivo, Madagascar and Bangui, Central African Republic., Maternal and Child Health Journal, 2021, 25 (10), pp.1626-1637. ⟨10.1007/s10995-021-03201-8⟩.
• 2021
  Collard JM, Sansonetti P, Papon N, , Taurine Makes Our Microbiota Stronger., Trends Endocrinol Metab 2021 May; 32(5): 259-261.
• 2021
  Azimdine Habib, Lova Andrianonimiadana, Maheninasy Rakotondrainipiana, Prisca Andriantsalama, Ravaka Randriamparany, Rindra Vatosoa Randremanana, Rado Rakotoarison, Inès Vigan‑womas, Armand Rafalimanantsoa, Pascale Vonaesch, Philippe J. Sansonetti, Jean-Marc Collard, The Afribiota Investigators, High prevalence of intestinal parasite infestations among stunted and control children aged 2 to 5 years old in two neighborhoods of Antananarivo, Madagascar, PLoS Neglected Tropical Diseases, 2021, 15 (4), pp.e0009333. ⟨10.1371/journal.pntd.0009333⟩.
• 2020
  Razafimahatratra SL, Wesolowski A, Rafetrarivony L, Heraud JM, Jones FK, Cauchemez S, Razafindratsimandresy R, Raharinantoanina SJ, Harimanana A, Collard JM, Metcalf CJE, Seroprevalence of pertussis in Madagascar and implications for vaccination., Epidemiol Infect 2020 Nov; 148(): e283.
• 2020
  Chaguza C, Yang M, Cornick JE, du Plessis M, Gladstone RA, Kwambana-Adams BA, Lo SW, Ebruke C, Tonkin-Hill G, Peno C, Senghore M, Obaro SK, Ousmane S, Pluschke G, Collard JM, Sigaùque B, French N, Klugman KP, Heyderman RS, McGee L, Antonio M, Breiman RF, von Gottberg A, Everett DB, Kadioglu A, Bentley SD, Bacterial genome-wide association study of hyper-virulent pneumococcal serotype 1 identifies genetic variation associated with neurotropism., Commun Biol 2020 Oct; 3(1): 559.
• 2020
  Huynh BT, Passet V, Rakotondrasoa A, Diallo T, Kerleguer A, Hennart M, Lauzanne A, Herindrainy P, Seck A, Bercion R, Borand L, Pardos de la Gandara M, Delarocque-Astagneau E, Guillemot D, Vray M, Garin B, Collard JM, Rodrigues C, Brisse S, Klebsiella pneumoniae carriage in low-income countries: antimicrobial resistance, genomic diversity and risk factors., Gut Microbes 2020 Sep; 11(5): 1287-1299.
• 2020
  Huus KE, Rodriguez-Pozo A, Kapel N, Nestoret A, Habib A, Dede M, Manges A, Collard JM, Sansonetti PJ, Vonaesch P, Finlay BB, Immunoglobulin recognition of fecal bacteria in stunted and non-stunted children: findings from the Afribiota study., Microbiome 2020 Jul; 8(1): 113.
• 2020
  Rakotondrasoa A, Passet V, Herindrainy P, Garin B, Kermorvant-Duchemin E, Delarocque-Astagneau E, Guillemot D, Huynh BT, Brisse S, Collard JM, Characterization of Klebsiella pneumoniae isolates from a mother-child cohort in Madagascar., J Antimicrob Chemother 2020 Jul; 75(7): 1736-1746.
• 2020
  Tchuinte PLS, Rabenandrasana MAN, Ramparany L, Ratsima E, Enouf V, Randrianirina F, Collard JM, Genome-based insights into the resistomes and mobilomes of two Providencia rettgeri strains isolated from wound infections in Madagascar., J Glob Antimicrob Resist 2020 Mar; 20(): 178-182.
• 2019
  Rabenandrasana MAN, Rafetrarivony LF, Rivoarilala LO, Enouf V, Robinson AL, Rakotozanany A, Vanhomwegen J, Caro V, Von Platen C, Manuguerra JC, Collard JM, Draft Genome Sequence of a Chryseobacterium indologenes Strain Isolated from a Blood Culture of a Hospitalized Child in Antananarivo, Madagascar., Microbiol Resour Announc 2019 Aug; 8(35): .
• 2019
  Bonneault M, Andrianoelina VH, Herindrainy P, Rabenandrasana MAN, Garin B, Breurec S, Delarocque-Astagneau E, Guillemot D, Andrianirina ZZ, Collard JM, Huynh BT, Opatowski L, Transmission Routes of Extended-Spectrum Beta-Lactamase-Producing Enterobacteriaceae in a Neonatology Ward in Madagascar., Am J Trop Med Hyg 2019 Jun; 100(6): 1355-1362.
• 2019
  Cooper LV, Robson A, Trotter CL, Aseffa A, Collard JM, Daugla DM, Diallo A, Hodgson A, Jusot JF, Omotara B, Sow S, Hassan-King M, Manigart O, Nascimento M, Woukeu A, Chandramohan D, Borrow R, Maiden MCJ, Greenwood B, Stuart JM, Risk factors for acquisition of meningococcal carriage in the African meningitis belt., Trop Med Int Health 2019 Apr; 24(4): 392-400.
• 2019
  Ouattara M, Whaley MJ, Jenkins LT, Schwartz SB, Traoré RO, Diarra S, Collard JM, Sacchi CT, Wang X, Triplex real-time PCR assay for the detection of Streptococcus pneumoniae, Neisseria meningitidis and Haemophilus influenzae directly from clinical specimens without extraction of DNA., Diagn Microbiol Infect Dis 2019 Mar; 93(3): 188-190.
• 2019
  Nadimpalli M, Fabre L, Yith V, Sem N, Gouali M, Delarocque-Astagneau E, Sreng N, Le Hello S, CTX-M-55-type ESBL-producing Salmonella enterica are emerging among retail meats in Phnom Penh, Cambodia., J Antimicrob Chemother 2019 Feb; 74(2): 342-348.
• 2019
  Nadimpalli M, Vuthy Y, de Lauzanne A, Fabre L, Criscuolo A, Gouali M, Huynh BT, Naas T, Phe T, Borand L, Jacobs J, Kerléguer A, Piola P, Guillemot D, Le Hello S, Delarocque-Astagneau E, Meat and Fish as Sources of Extended-Spectrum β-Lactamase-Producing Escherichia coli, Cambodia., Emerg Infect Dis 2019 Jan; 25(1): 126-31.
• 2019
  Simo Tchuinte PL, Rabenandrasana MAN, Kowalewicz C, Andrianoelina VH, Rakotondrasoa A, Andrianirina ZZ, Enouf V, Ratsima EH, Randrianirina F, Collard JM, Phenotypic and molecular characterisations of carbapenem-resistant Acinetobacter baumannii strains isolated in Madagascar., Antimicrob Resist Infect Control 2019 ; 8(): 31.
• 2018
  Vonaesch P, Morien E, Andrianonimiadana L, Sanke H, Mbecko JR, Huus KE, Naharimanananirina T, Gondje BP, Nigatoloum SN, Vondo SS, Kaleb Kandou JE, Randremanana R, Rakotondrainipiana M, Mazel F, Djorie SG, Gody JC, Finlay BB, Rubbo PA, Wegener Parfrey L, Collard JM, Sansonetti PJ, Stunted childhood growth is associated with decompartmentalization of the gastrointestinal tract and overgrowth of oropharyngeal taxa., Proc Natl Acad Sci U S A 2018 Sep; 115(36): E8489-E8498.
• 2018
  Vonaesch P, Randremanana R, Gody JC, Collard JM, Giles-Vernick T, Doria M, Vigan-Womas I, Rubbo PA, Etienne A, Andriatahirintsoa EJ, Kapel N, Brown E, Huus KE, Duffy D, Finlay BB, Hasan M, Hunald FA, Robinson A, Manirakiza A, Wegener-Parfrey L, Vray M, Sansonetti PJ, Identifying the etiology and pathophysiology underlying stunting and environmental enteropathy: study protocol of the AFRIBIOTA project., BMC Pediatr 2018 Jul; 18(1): 236.
• 2018
  Rakotondrasoa A, Issack MI, Garin B, Biot F, Valade E, Wattiau P, Allou N, Belmonte O, Bibi J, Price EP, Collard JM, Melioidosis in the Western Indian Ocean and the Importance of Improving Diagnosis, Surveillance, and Molecular Typing., Trop Med Infect Dis 2018 Mar; 3(1): .
• 2018
  Nadimpalli M, Delarocque-Astagneau E, Love DC, Price LB, Huynh BT, Collard JM, Lay KS, Borand L, Ndir A, Walsh TR, Guillemot D, Combating Global Antibiotic Resistance: Emerging One Health Concerns in Lower- and Middle-Income Countries., Clin Infect Dis 2018 Mar; 66(6): 963-969.
• 2018
  Herindrainy P, Rabenandrasana MAN, Andrianirina ZZ, Rakotoarimanana FMJ, Padget M, de Lauzanne A, Ndir A, Kermorvant-Duchemin E, Garin B, Piola P, Collard JM, Guillemot D, Huynh BT, Delarocque-Astagneau E, Acquisition of extended spectrum beta-lactamase-producing enterobacteriaceae in neonates: A community based cohort in Madagascar., PLoS One 2018 ; 13(3): e0193325.
• 2018
  Diallo K, Coulibaly MD, Rebbetts LS, Harrison OB, Lucidarme J, Gamougam K, Tekletsion YK, Bugri A, Toure A, Issaka B, Dieng M, Trotter C, Collard JM, Sow SO, Wang X, Mayer LW, Borrow R, Greenwood BM, Maiden MCJ, Manigart O, Development of a PCR algorithm to detect and characterize Neisseria meningitidis carriage isolates in the African meningitis belt., PLoS One 2018 ; 13(12): e0206453.
• 2017
  Raharimalala FN, Andrianinarivomanana TM, Rakotondrasoa A, Collard JM, Boyer S, Usefulness and accuracy of MALDI-TOF mass spectrometry as a supplementary tool to identify mosquito vector species and to invest in development of international database., Med Vet Entomol 2017 Sep; 31(3): 289-298.
• 2017
  Mahy P, Collard JM, Gala JL, Herman P, Groof D, Quoilin S, Sneyers M, Health crises due to infectious and communicable diseases : European preparedness and response tools in an international context., J Bus Contin Emer Plan 2017 Jun; 10(4): 353-366.
• 2017
  Jusot JF, Neill DR, Waters EM, Bangert M, Collins M, Bricio Moreno L, Lawan KG, Moussa MM, Dearing E, Everett DB, Collard JM, Kadioglu A, Airborne dust and high temperatures are risk factors for invasive bacterial disease., J Allergy Clin Immunol 2017 Mar; 139(3): 977-986.e2.
• 2017
  Cornick JE, Tastan Bishop Ö, Yalcin F, Kiran AM, Kumwenda B, Chaguza C, Govindpershad S, Ousmane S, Senghore M, du Plessis M, Pluschke G, Ebruke C, McGee L, Sigaùque B, Collard JM, Bentley SD, Kadioglu A, Antonio M, von Gottberg A, French N, Klugman KP, Heyderman RS, Alderson M, Everett DB, The global distribution and diversity of protein vaccine candidate antigens in the highly virulent Streptococcus pnuemoniae serotype 1., Vaccine 2017 Feb; 35(6): 972-980.
• 2017
  Gay N, Belmonte O, Collard JM, Halifa M, Issack MI, Mindjae S, Palmyre P, Ibrahim AA, Rasamoelina H, Flachet L, Filleul L, Cardinale E, Review of Antibiotic Resistance in the Indian Ocean Commission: A Human and Animal Health Issue., Front Public Health 2017 ; 5(): 162.
• 2017
  Cooper LV, Boukary RM, Aseffa A, Mihret W, Collard JM, Daugla D, Hodgson A, Sokhna C, Omotara B, Sow S, Quaye SL, Diallo K, Manigart O, Maiden MCJ, Findlow H, Borrow R, Stuart JM, Greenwood BM, Trotter CL, Investigation of correlates of protection against pharyngeal carriage of Neisseria meningitidis genogroups W and Y in the African meningitis belt., PLoS One 2017 ; 12(8): e0182575.
• 2016
  , Household transmission of Neisseria meningitidis in the African meningitis belt: a longitudinal cohort study., Lancet Glob Health 2016 Dec; 4(12): e989-e995.
• 2016
  Padget M, Tamarelle J, Herindrainy P, Ndir A, Diene Sarr F, Richard V, Piola P, Guillemot D, Delarocque-Astagneau E, A community survey of antibiotic consumption among children in Madagascar and Senegal: the importance of healthcare access and care quality., J Antimicrob Chemother 2017 Feb; 72(2): 564-573.
• 2016
  Chaguza C, Cornick JE, Harris SR, Andam CP, Bricio-Moreno L, Yang M, Yalcin F, Ousmane S, Govindpersad S, Senghore M, Ebruke C, Du Plessis M, Kiran AM, Pluschke G, Sigauque B, McGee L, Klugman KP, Turner P, Corander J, Parkhill J, Collard JM, Antonio M, von Gottberg A, Heyderman RS, French N, Kadioglu A, Hanage WP, Everett DB, Bentley SD, Understanding pneumococcal serotype 1 biology through population genomic analysis., BMC Infect Dis 2016 Nov; 16(1): 649.
• 2016
  Diallo K, Trotter C, Timbine Y, Tamboura B, Sow SO, Issaka B, Dano ID, Collard JM, Dieng M, Diallo A, Mihret A, Ali OA, Aseffa A, Quaye SL, Bugri A, Osei I, Gamougam K, Mbainadji L, Daugla DM, Gadzama G, Sambo ZB, Omotara BA, Bennett JS, Rebbetts LS, Watkins ER, Nascimento M, Woukeu A, Manigart O, Borrow R, Stuart JM, Greenwood BM, Maiden MCJ, Pharyngeal carriage of Neisseria species in the African meningitis belt., J Infect 2016 Jun; 72(6): 667-677.
• 2016
  Manigart O, Trotter C, Findlow H, Assefa A, Mihret W, Moti Demisse T, Yeshitela B, Osei I, Hodgson A, Quaye SL, Sow S, Coulibaly M, Diallo K, Traore A, Collard JM, Moustapha Boukary R, Djermakoye O, Mahamane AE, Jusot JF, Sokhna C, Alavo S, Doucoure S, Ba el H, Dieng M, Diallo A, Daugla DM, Omotara B, Chandramohan D, Hassan-King M, Nascimento M, Woukeu A, Borrow R, Stuart JM, Greenwood B, A Seroepidemiological Study of Serogroup A Meningococcal Infection in the African Meningitis Belt., PLoS One 2016 ; 11(2): e0147928.
• 2016
  Vuong J, Collard JM, Whaley MJ, Bassira I, Seidou I, Diarra S, Ouédraogo RT, Kambiré D, Taylor TH, Sacchi C, Mayer LW, Wang X, Development of Real-Time PCR Methods for the Detection of Bacterial Meningitis Pathogens without DNA Extraction., PLoS One 2016 ; 11(2): e0147765.
• 2016
  Manigart O, Trotter C, Findlow H, Aseffa A, Mihret W, Moti Demisse T, Yeshitela B, Osei I, Hodgson A, Quaye SL, Sow S, Coulibaly M, Diallo K, Traore A, Collard JM, Moustapha Boukary R, Djermakoye O, Mahamane AE, Jusot JF, Sokhna C, Alavo S, Doucoure S, Ba EH, Dieng M, Diallo A, Daugla DM, Omotara B, Chandramohan D, Hassan-King M, Nascimento M, Woukeu A, Borrow R, Stuart JM, Greenwood B, Correction: A Seroepidemiological Study of Serogroup A Meningococcal Infection in the African Meningitis Belt., PLoS One 2016 ; 11(7): e0158938.
• 2015
  Diomandé FV, Djingarey MH, Daugla DM, Novak RT, Kristiansen PA, Collard JM, Gamougam K, Kandolo D, Mbakuliyemo N, Mayer L, Stuart J, Clark T, Tevi-Benissan C, Perea WA, Preziosi MP, Marc LaForce F, Caugant D, Messonnier N, Walker O, Greenwood B, Public Health Impact After the Introduction of PsA-TT: The First 4 Years., Clin Infect Dis 2015 Nov; 61 Suppl 5(Suppl 5): S467-72.
• 2015
  , The Diversity of Meningococcal Carriage Across the African Meningitis Belt and the Impact of Vaccination With a Group A Meningococcal Conjugate Vaccine., J Infect Dis 2015 Oct; 212(8): 1298-307.
• 2015
  Cornick JE, Chaguza C, Harris SR, Yalcin F, Senghore M, Kiran AM, Govindpershad S, Ousmane S, Plessis MD, Pluschke G, Ebruke C, McGee L, Sigaùque B, Collard JM, Antonio M, von Gottberg A, French N, Klugman KP, Heyderman RS, Bentley SD, Everett DB, For The PAGe Consortium, Region-specific diversification of the highly virulent serotype 1 Streptococcus pneumoniae., Microb Genom 2015 Aug; 1(2): e000027.
• 2015
  Alio Sanda A, Granger Farbos A, Hamidou AA, Vonaesch P, Jusot JF, Koeck JL, Collard JM, MLVA-typing on Streptococcus pneumoniae serotype 1 isolated from meningitis cases in Niger before the introduction of PCV-13 revealed a low genetic diversity., Trans R Soc Trop Med Hyg 2015 Jul; 109(7): 477-80.
• 2015
  Baltazar M, Ngandjio A, Holt KE, Lepillet E, Pardos de la Gandara M, Collard JM, Bercion R, Nzouankeu A, Le Hello S, Dougan G, Fonkoua MC, Weill FX, Multidrug-resistant Salmonella enterica serotype Typhi, Gulf of Guinea Region, Africa., Emerg Infect Dis 2015 Apr; 21(4): 655-9.
• 2015
  Mattheus W, Hanquet G, Collard JM, Vanhoof R, Bertrand S, Changes in Meningococcal Strains in the Era of a Serogroup C Vaccination Campaign: Trends and Evolution in Belgium during the Period 1997-2012., PLoS One 2015 ; 10(10): e0139615.
• 2014
  Jusot V, Aberrane S, Alé F, Laouali B, Moussa I, Alio SA, Adehossi E, Collard JM, Grais RF, Prevalence of Bordetella infection in a hospital setting in niamey, niger., J Trop Pediatr 2014 Jun; 60(3): 223-30.
• 2014
  Paireau J, Maïnassara HB, Jusot JF, Collard JM, Idi I, Moulia-Pelat JP, Mueller JE, Fontanet A, Spatio-temporal factors associated with meningococcal meningitis annual incidence at the health centre level in Niger, 2004-2010., PLoS Negl Trop Dis 2014 May; 8(5): e2899.
• 2014
  Page AL, Jusot V, Mamaty AA, Adamou L, Kaplon J, Pothier P, Djibo A, Manzo ML, Toure B, Langendorf C, Collard JM, Grais RF, Rotavirus surveillance in urban and rural areas of Niger, April 2010-March 2012., Emerg Infect Dis 2014 Apr; 20(4): 573-80.
• 2014
  Collard JM, Wang X, Mahamane AE, Idi I, Issaka B, Ousseni M, Mayer LW, Nato F, Moulia-Pelat JP, A five-year field assessment of rapid diagnostic tests for meningococcal meningitis in Niger by using the combination of conventional and real-time PCR assays as a gold standard., Trans R Soc Trop Med Hyg 2014 Jan; 108(1): 6-12.
• 2013
  Collard JM, Issaka B, Zaneidou M, Hugonnet S, Nicolas P, Taha MK, Greenwood B, Jusot JF, Epidemiological changes in meningococcal meningitis in Niger from 2008 to 2011 and the impact of vaccination., BMC Infect Dis 2013 Dec; 13(): 576.
• 2013
  , Meningococcal carriage in the African meningitis belt., Trop Med Int Health 2013 Aug; 18(8): 968-78.
• 2013
  Terrade A, Collard JM, Nato F, Taha MK, Laboratory evaluation of a rapid diagnostic test for Neisseria meningitidis serogroup A., Trans R Soc Trop Med Hyg 2013 Jul; 107(7): 460-1.
• 2013
  Jusot JF, Tohon Z, Yazi AA, Collard JM, Significant sequelae after bacterial meningitis in Niger: a cohort study., BMC Infect Dis 2013 May; 13(): 228.
• 2013
  Altmann D, Aseffa A, Bash M, Basta N, Borrow R, Broome C, Caugant D, Clark T, Collard JM, Djingarey M, Goldblatt D, Greenwood B, Griffiths U, Hajjeh R, Hassan-King M, Hugonnet S, Kimball AM, LaForce M, MacLennan C, Maiden MC, Manigart O, Mayer L, Messonnier N, Moisi J, Moore K, Moto DD, Mueller J, Nascimento M, Obaro S, Ouedraogo R, Page AL, Perea W, Pluschke G, Preziosi MP, Sow S, Stephens D, Stuart J, Thomson M, Tiendrebeogo S, Trape JF, Vernet G, Priorities for research on meningococcal disease and the impact of serogroup A vaccination in the African meningitis belt., Vaccine 2013 Mar; 31(11): 1453-7.
• 2013
  Basta NE, Stuart JM, Nascimento MC, Manigart O, Trotter C, Hassan-King M, Chandramohan D, Sow SO, Berthe A, Bedru A, Tekletsion YK, Collard JM, Jusot JF, Diallo A, Basséne H, Daugla DM, Gamougam K, Hodgson A, Forgor AA, Omotara BA, Gadzama GB, Watkins ER, Rebbetts LS, Diallo K, Weiss NS, Halloran ME, Maiden MC, Greenwood B, Methods for identifying Neisseria meningitidis carriers: a multi-center study in the African meningitis belt., PLoS One 2013 ; 8(10): e78336.
• 2013
  Collard JM, Alio Sanda AK, Jusot JF, Determination of pneumococcal serotypes in meningitis cases in Niger, 2003-2011., PLoS One 2013 ; 8(3): e60432.
• 2012
  Heraud JM, Njouom R, Rousset D, Kadjo H, Caro V, Ndiaye MN, Victoir K, Collard JM, Orelle A, Yekwa EL, Ekaza E, Razanajatovo NH, Adamou L, Biscornet L, Enouf V, van der Werf S, Diop OM, Spatiotemporal circulation of influenza viruses in 5 African countries during 2008-2009: a collaborative study of the Institut Pasteur International Network., J Infect Dis 2012 Dec; 206 Suppl 1(Suppl 1): S5-13.
• 2012
  Vanhoof R, Gillis P, Stévart O, Boland C, Vandenberg O, Fux F, Collard JM, Bertrand S, Transmission of multiple resistant Salmonella Concord from internationally adopted children to their adoptive families and social environment: proposition of guidelines., Eur J Clin Microbiol Infect Dis 2012 Apr; 31(4): 491-7.
• 2012
  Jusot JF, Adamou L, Collard JM, Influenza transmission during a one-year period (2009-2010) in a Sahelian city: low temperature plays a major role., Influenza Other Respir Viruses 2012 Mar; 6(2): 87-9.
• 2012
  Paireau J, Girond F, Collard JM, Maïnassara HB, Jusot JF, Analysing spatio-temporal clustering of meningococcal meningitis outbreaks in Niger reveals opportunities for improved disease control., PLoS Negl Trop Dis 2012 ; 6(3): e1577.
• 2011
  Collard JM, Maman Z, Abani A, Mainasara HB, Djibo S, Yacouba H, Maitournam R, Sidikou F, Nicolas P, Rocourt J, Jusot JF, Microbiological and epidemiological investigation of the Neisseria meningitidis serogroup A epidemic in Niger in 2009: last wave before the introduction of the serogroup A meningococcal conjugate vaccine?, Epidemiol Infect 2011 Nov; 139(11): 1656-60.
• 2011
  Bertrand S, Van Meervenne E, De Baere T, Vanhoof R, Collard JM, Ruckly C, Taha M, Carion F, Detection of a geographical and endemic cluster of hyper-invasive meningococcal strains., Microbes Infect 2011 Jul; 13(7): 684-90.
• 2010
  Collard JM, Maman Z, Yacouba H, Djibo S, Nicolas P, Jusot JF, Rocourt J, Maitournam R, Increase in Neisseria meningitidis serogroup W135, Niger, 2010., Emerg Infect Dis 2010 Sep; 16(9): 1496-8.
• 2010
  Vandenberg O, Nyarukweba DZ, Ndeba PM, Hendriksen RS, Barzilay EJ, Schirvel C, Bisimwa BB, Collard JM, Aidara Kane A, Aarestrup FM, Microbiologic and clinical features of Salmonella species isolated from bacteremic children in eastern Democratic Republic of Congo., Pediatr Infect Dis J 2010 Jun; 29(6): 504-10.
• 2010
  Bertrand S, Dierick K, Heylen K, De Baere T, Pochet B, Robesyn E, Lokietek S, Van Meervenne E, Imberechts H, De Zutter L, Collard JM, Lessons learned from the management of a national outbreak of Salmonella ohio linked to pork meat processing and distribution., J Food Prot 2010 Mar; 73(3): 529-34.
• 2010
  Yde M, Botteldoorn N, Bertrand S, Collard J, Dierick K, Microbiological and molecular investigation of an increase of human listeriosis in Belgium, 2006-2007., Euro Surveill 2010 Feb; 15(6): .
• 2009
  Vrints M, Mairiaux E, Van Meervenne E, Collard JM, Bertrand S, Surveillance of antibiotic susceptibility patterns among Shigella sonnei strains isolated in Belgium during the 18-year period 1990 to 2007., J Clin Microbiol 2009 May; 47(5): 1379-85.
• 2008
  Doublet B, Praud K, Bertrand S, Collard JM, Weill FX, Cloeckaert A, Novel insertion sequence- and transposon-mediated genetic rearrangements in genomic island SGI1 of Salmonella enterica serovar Kentucky., Antimicrob Agents Chemother 2008 Oct; 52(10): 3745-54.
• 2008
  Collard JM, Bertrand S, Dierick K, Godard C, Wildemauwe C, Vermeersch K, Duculot J, Van Immerseel F, Pasmans F, Imberechts H, Quinet C, Drastic decrease of Salmonella Enteritidis isolated from humans in Belgium in 2005, shift in phage types and influence on foodborne outbreaks., Epidemiol Infect 2008 Jun; 136(6): 771-81.
• 2008
  Meakins S, Fisher IS, Berghold C, Gerner-Smidt P, Tschäpe H, Cormican M, Luzzi I, Schneider F, Wannett W, Coia J, Echeita A, Threlfall EJ, Antimicrobial drug resistance in human nontyphoidal Salmonella isolates in Europe 2000-2004: a report from the Enter-net International Surveillance Network., Microb Drug Resist 2008 Mar; 14(1): 31-5.
• 2007
  Vrints M, Bertrand S, Collard JM, A bacterial population study of commercialized wastewater inoculants., J Appl Microbiol 2007 Nov; 103(5): 2006-15.
• 2007
  Collard JM, Place S, Denis O, Rodriguez-Villalobos H, Vrints M, Weill FX, Baucheron S, Cloeckaert A, Struelens M, Bertrand S, Travel-acquired salmonellosis due to Salmonella Kentucky resistant to ciprofloxacin, ceftriaxone and co-trimoxazole and associated with treatment failure., J Antimicrob Chemother 2007 Jul; 60(1): 190-2.
• 2007
  Cloeckaert A, Praud K, Doublet B, Bertini A, Carattoli A, Butaye P, Imberechts H, Bertrand S, Collard JM, Arlet G, Weill FX, Dissemination of an extended-spectrum-beta-lactamase blaTEM-52 gene-carrying IncI1 plasmid in various Salmonella enterica serovars isolated from poultry and humans in Belgium and France between 2001 and 2005., Antimicrob Agents Chemother 2007 May; 51(5): 1872-5.
• 2007
  Guerin PJ, Grais RF, Rottingen JA, Valleron AJ, Using European travellers as an early alert to detect emerging pathogens in countries with limited laboratory resources., BMC Public Health 2007 Jan; 7(): 8.
• 2007
  Brédart S, Wastelin M, Collard JM, Coppée M, Bodart E, [Pet turtle and septicemia: what is the relationship?]., Rev Med Liege 2007 ; 62(7-8): 496-7.
• 2006
  Bertrand S, Weill FX, Cloeckaert A, Vrints M, Mairiaux E, Praud K, Dierick K, Wildemauve C, Godard C, Butaye P, Imberechts H, Grimont PA, Collard JM, Clonal emergence of extended-spectrum beta-lactamase (CTX-M-2)-producing Salmonella enterica serovar Virchow isolates with reduced susceptibilities to ciprofloxacin among poultry and humans in Belgium and France (2000 to 2003)., J Clin Microbiol 2006 Aug; 44(8): 2897-903.
• 2006
  Bauwens L, Vercammen F, Bertrand S, Collard JM, De Ceuster S, Isolation of Salmonella from environmental samples collected in the reptile department of Antwerp Zoo using different selective methods., J Appl Microbiol 2006 Aug; 101(2): 284-9.
• 2005
  Bertrand S, Huys G, Yde M, D'Haene K, Tardy F, Vrints M, Swings J, Collard JM, Detection and characterization of tet(M) in tetracycline-resistant Listeria strains from human and food-processing origins in Belgium and France., J Med Microbiol 2005 Dec; 54(Pt 12): 1151-1156.
• 2005
  Ghafir Y, China B, Korsak N, Dierick K, Collard JM, Godard C, De Zutter L, Daube G, Belgian surveillance plans to assess changes in Salmonella prevalence in meat at different production stages., J Food Prot 2005 Nov; 68(11): 2269-77.
• 2005
  Pasmans F, Martel A, Boyen F, Vandekerchove D, Wybo I, Immerseel FV, Heyndrickx M, Collard JM, Ducatelle R, Haesebrouck F, Characterization of Salmonella isolates from captive lizards., Vet Microbiol 2005 Oct; 110(3-4): 285-91.
• 2005
  Helms M, Ethelberg S, Mølbak K, International Salmonella Typhimurium DT104 infections, 1992-2001., Emerg Infect Dis 2005 Jun; 11(6): 859-67.
• 2005
  Fisher IS, Threlfall EJ, The Enter-net and Salm-gene databases of foodborne bacterial pathogens that cause human infections in Europe and beyond: an international collaboration in surveillance and the development of intervention strategies., Epidemiol Infect 2005 Feb; 133(1): 1-7.
• 2004
  Van Immerseel F, Pasmans F, De Buck J, Rychlik I, Hradecka H, Collard JM, Wildemauwe C, Heyndrickx M, Ducatelle R, Haesebrouck F, Cats as a risk for transmission of antimicrobial drug-resistant Salmonella., Emerg Infect Dis 2004 Dec; 10(12): 2169-74.
• 2004
  Fisher IS, International trends in salmonella serotypes 1998-2003–a surveillance report from the Enter-net international surveillance network., Euro Surveill 2004 Nov; 9(11): 45-7.
• 2004
  Fisher IS, Dramatic shift in the epidemiology of Salmonella enterica serotype Enteritidis phage types in western Europe, 1998-2003–results from the Enter-net international salmonella database., Euro Surveill 2004 Nov; 9(11): 43-5.
• 2004
  Pasmans F, Van Immerseel F, Hermans K, Heyndrickx M, Collard JM, Ducatelle R, Haesebrouck F, Assessment of virulence of pigeon isolates of Salmonella enterica subsp. enterica serovar typhimurium variant copenhagen for humans., J Clin Microbiol 2004 May; 42(5): 2000-2.
• 2004
  Doublet B, Butaye P, Imberechts H, Collard JM, Chaslus-Dancla E, Cloeckaert A, Salmonella agona harboring genomic island 1-A., Emerg Infect Dis 2004 Apr; 10(4): 756-8.
• 2004
  Huys G, D'Haene K, Collard JM, Swings J, Prevalence and molecular characterization of tetracycline resistance in Enterococcus isolates from food., Appl Environ Microbiol 2004 Mar; 70(3): 1555-62.
• 2004
  Wybot I, Wildemauwe C, Godard C, Bertrand S, Collard JM, Antimicrobial drug resistance in nontyphoid human Salmonella in Belgium: trends for the period 2000-2002., Acta Clin Belg 2004 ; 59(3): 152-60.
• 2004
  Guillaume G, Ledent V, Moens W, Collard JM, Phylogeny of efflux-mediated tetracycline resistance genes and related proteins revisited., Microb Drug Resist 2004 ; 10(1): 11-26.
• 2004
  Wybo I, Potters D, Plaskie K, Covens L, Collard JM, Lauwers S, Salmonella enterica subspecies houtenae serotype 44:z4, z23:–as a rare cause of meningitis., Acta Clin Belg 2004 ; 59(4): 232-4.
• 2002
  van Overbeek LS, Wellington EM, Egan S, Smalla K, Heuer H, Collard JM, Guillaume G, Karagouni AD, Nikolakopoulou TL, van Elsas JD, Prevalence of streptomycin-resistance genes in bacterial populations in European habitats., FEMS Microbiol Ecol 2002 Nov; 42(2): 277-88.
• 2002
  Heuer H, Krögerrecklenfort E, Wellington EM, Egan S, van Elsas JD, van Overbeek L, Collard JM, Guillaume G, Karagouni AD, Nikolakopoulou TL, Smalla K, , Gentamicin resistance genes in environmental bacteria: prevalence and transfer., FEMS Microbiol Ecol 2002 Nov; 42(2): 289-302.
• 2000
  Guardabassi L, Dijkshoorn L, Collard JM, Olsen JE, Dalsgaard A, Distribution and in-vitro transfer of tetracycline resistance determinants in clinical and aquatic Acinetobacter strains., J Med Microbiol 2000 Oct; 49(10): 929-936.
• 2000
  Guillaume G, Verbrugge D, Chasseur-Libotte M, Moens W, Collard J, PCR typing of tetracycline resistance determinants (Tet A-E) in Salmonella enterica serotype Hadar and in the microbial community of activated sludges from hospital and urban wastewater treatment facilities in Belgium., FEMS Microbiol Ecol 2000 Apr; 32(1): 77-85.
• 1999
  Doblhoff-Dier O, Bachmayer H, Bennett A, Brunius G, Bürki K, Cantley M, Collins C, Crooy P, Elmqvist A, Frontali-Botti C, Havenaar R, Haymerle H, Lelieveld H, Lex M, Mahler JL, Martinez L, Mosgaard C, Olsen L, Pazlarova J, Rudan F, Sarvas M, Stepankova H, Tzotzos G, Wagner K, Werner R, Safe biotechnology 9: values in risk assessment for the environmental application of microorganisms. The Safety in Biotechnology Working Party of the European Federation of Biotechnology., Trends Biotechnol 1999 Aug; 17(8): 307-11.
• 1997
  Lelieveld HL, Bachmayer H, Boon B, Bennett A, Brunius G, Bürki K, Cantley M, Collard JM, Collins CH, Crooy P, Doblhoff-Dier O, Dubakiene R, Economidis I, Elmqvist A, Frontali-Botti C, Havenaar R, Haymerle H, Käppeli O, Leaver G, Lex M, Lund S, Mahler JL, Marris R, Martinez LJ, Zhilevicha A, Safe biotechnology. 8. Transport of infectious and biological materials. Working Party “Safety in Biotechnology” of the European Federation of Biotechnology., Appl Microbiol Biotechnol 1997 Aug; 48(2): 135-40.
• 1994
  Collard JM, Corbisier P, Diels L, Dong Q, Jeanthon C, Mergeay M, Taghavi S, van der Lelie D, Wilmotte A, Wuertz S, Plasmids for heavy metal resistance in Alcaligenes eutrophus CH34: mechanisms and applications., FEMS Microbiol Rev 1994 Aug; 14(4): 405-14.
• 1993
  Dijkmans R, Jagers A, Kreps S, Collard JM, Mergeay M, Rapid method for purification of soil DNA for hybridization and PCR analysis., Microb Releases 1993 Jun; 2(1): 29-34.
• 1993
  Collard JM, Provoost A, Taghavi S, Mergeay M, A new type of Alcaligenes eutrophus CH34 zinc resistance generated by mutations affecting regulation of the cnr cobalt-nickel resistance system., J Bacteriol 1993 Feb; 175(3): 779-84.
• 1990
  Collard JM, Matagne RF, Isolation and genetic analysis of Chlamydomonas reinhardtii strains resistant to cadmium., Appl Environ Microbiol 1990 Jul; 56(7): 2051-5.