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2024Insights into the virome of Hyalomma marginatum in the Danube Delta: a major vector of Crimean-Congo hemorrhagic fever virus in Eastern Europe., Parasit Vectors 2024 Nov; 17(1): 482.
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2023Virus Pop: Expanding viral databases by protein sequence simulation, International Conference on Clinical Metagenomics 2023, Nov 2023, Genève (Suisse), Switzerland.
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2023Microseek: an innovative approach to unraveling clinical metagenomic secrets, 8th International Conference on Clinical Metagenomics, Nov 2023, Geneva, Switzerland.
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2023Genotype and Phenotype Characterization of Rhinolophus sp. Sarbecoviruses from Vietnam: Implications for Coronavirus Emergence., Viruses 2023 Sep; 15(9): .
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2023Comprehensive Characterization of Viral Diversity of Female Mosquitoes in Madagascar, Viruses, 2023, 15 (9), pp.1852. ⟨10.3390/v15091852⟩.
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2023Longitudinal Study of Viral Diversity Associated with Mosquito Species Circulating in Cambodia., Viruses 2023 Aug; 15(9): .
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2023Acute tubulointerstitial nephritis with or without uveitis: a novel form of post-acute COVID-19 syndrome in children., Kidney Int 2023 Jun; 103(6): 1193-1198.
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2023Virus Pop—Expanding Viral Databases by Protein Sequence Simulation, Viruses, 2023, 15 (6), pp.1227. ⟨10.3390/v15061227⟩.
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2023SARS‐CoV‐2‐related bat virus behavior in human‐relevant models sheds light on the origin of COVID‐19, EMBO Reports, 2023, 24 (4), pp.e56055. ⟨10.15252/embr.202256055⟩.
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2023A Search for Tick-Associated, Bronnoya-like Virus Spillover into Sheep, Microorganisms, 2023, 11 (1), pp.209. ⟨10.3390/microorganisms11010209⟩.
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2022Microseek: A Protein-Based Metagenomic Pipeline for Virus Diagnostic and Discovery., Viruses 2022 Sep; 14(9): .
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2022Seroprevalence of Crimean-Congo Hemorrhagic Fever Among Small Ruminants from Southern Romania., Vector Borne Zoonotic Dis 2022 Jul; 22(7): 397-401.
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2022Author Correction: Bat coronaviruses related to SARS-CoV-2 and infectious for human cells., Nature 2022 Jul; 607(7920): E19.
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2022Bat coronaviruses related to SARS-CoV-2 and infectious for human cells., Nature 2022 Apr; 604(7905): 330-336.
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2022Detection of Phenuiviridae, Chuviridae Members, and a Novel Quaranjavirus in Hard Ticks From Danube Delta., Front Vet Sci 2022 ; 9(): 863814.
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2022De nouveaux coronavirus de chauve-souris similaires à SARS-CoV-2 éclairent l’origine de la pandémie de COVID-19, Journées Francophones de Virologie, Apr 2022, Strasbourg, France.
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2022Discovery of bat coronaviruses close to SARS-CoV-2 and infectious for human cells., Nautre 604 (2022) 330.
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2021Low seroprevalence of COVID-19 in Lao PDR, late 2020., Lancet Reg Health West Pac 2021 Aug; 13(): 100197.
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2021Identification of Umbre Orthobunyavirus as a Novel Zoonotic Virus Responsible for Lethal Encephalitis in 2 French Patients With Hypogammaglobulinemia, Clinical Infectious Diseases, 2021, 72 (10), pp.1701-1708. ⟨10.1093/cid/ciaa308⟩.
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2021Arterial abnormalities identified in kidneys transplanted into children during the COVID-19 pandemic., Am J Transplant 2021 May; 21(5): 1937-1943.
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2021Une infection antérieure par des coronavirus saisonniers n’empêche pas la COVID-19 chez les enfants., Journées Francophones de Virologie, Apr 2021, Montpellier, France.
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2021Faune sauvage et SARS-CoV-2 : exposition des animaux de zoo pendant la circulation du virus en France en 2020., Journées Francophones de Virologie, Apr 2021, Montpellier, France.
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2021Identification d’un nouvel arbovirus neurotrope en France : le virus Umbre, XXIIIèmes Journées Francophones de Virologie, Apr 2021, Montpellier, France.
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2021The virome of Rhipicephalus, Dermacentor and Haemaphysalis ticks from Eastern Romania includes novel viruses with potential relevance for public health., Transbound Emerg Dis 2022 May; 69(3): 1387-1403.
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2021Prior infection by seasonal coronaviruses, as assessed by serology, does not prevent SARS-CoV-2 infection and disease in children, France, April to June 2020., Euro Surveill 2021 Apr; 26(13): .
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2021SARS-CoV-2 infection in schools in a northern French city: a retrospective serological cohort study in an area of high transmission, France, January to April 2020, Eurosurveillance, 2021, 26 (15), pp.2001695. ⟨10.2807/1560-7917.es.2021.26.15.2001695⟩.
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2021Immunological and virological profile of children with chilblain-like lesions and SARS-CoV-2., J Eur Acad Dermatol Venereol 2021 Mar; 35(3): e164-e167.
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2021Deep Impact of Random Amplification and Library Construction Methods on Viral Metagenomics Results, Viruses, 2021, 13 (2), pp.253. ⟨10.3390/v13020253⟩.
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2020A comparison of four serological assays for detecting anti–SARS-CoV-2 antibodies in human serum samples from different populations, Science Translational Medicine, 2020, 12 (559), pp.eabc3103. ⟨10.1126/scitranslmed.abc3103⟩.
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2020Whole genome sequencing and phylogenetic characterization of a novel bat-associated picornavirus-like virus with an unusual genome organization, Infection, Genetics and Evolution, 2020, 78, 5 p. ⟨10.1016/j.meegid.2019.104130⟩.
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2020Viromics on Honey-Baited FTA Cards as a New Tool for the Detection of Circulating Viruses in Mosquitoes, Viruses, 2020, 12, ⟨10.3390/v12030274⟩.
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2020RNA Viruses of Amblyomma variegatum and Rhipicephalus microplus and Cattle Susceptibility in the French Antilles, Viruses, 2020, 12 (2), ⟨10.3390/v12020144⟩.
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2020Absence of SARS-CoV-2 infection in cats and dogs in close contact with a cluster of COVID-19 patients in a veterinary campus., One Health 2020 Dec; 10(): 100164.
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2019Six Nearly Complete Genome Segments of a Novel Reovirus Identified in Laotian Batflies, Microbiology Resource Announcements, 2019, 8 (46), pp.e00733-19. ⟨10.1128/MRA.00733-19⟩.
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2019Insights into the Host Range, Genetic Diversity, and Geographical Distribution of Jingmenviruses, MSphere, 2019, 4 (6), pp.e00645-19. ⟨10.1128/mSphere.00645-19⟩.
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2019A Novel Polycipiviridae Virus Identified in Pteropus lylei Stools., Microbiol Resour Announc 2019 Apr; 8(15): .
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2019Monitoring Silent Spillovers Before Emergence: A Pilot Study at the Tick/Human Interface in Thailand, Frontiers in Microbiology, 2019, 10, pp.2315. ⟨10.3389/fmicb.2019.02315⟩.
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2019RVDB-prot, a reference viral protein database and its HMM profiles [version 2; peer review: 2 approved], F1000Research, 2020, 8, pp.530. ⟨10.12688/f1000research.18776.2⟩.
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2018Protocol for Generating Infectious RNA Viromes from Complex Biological Samples., Methods Mol Biol 2018 ; 1838(): 25-36.
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2016Zoonotic viruses: how to monitor their emergence?, Virologie (Montrouge) 2016 Aug; 20(4): 231-244.
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2016A new asfarvirus infecting amoebas discovered in hematophagous arthropods and their vertebrate hosts., Virologie (Montrouge) 2016 Aug; 20(4): 245-247.
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2016Characterization of Viral Communities of Biting Midges and Identification of Novel Thogotovirus Species and Rhabdovirus Genus., Viruses 2016 Mar; 8(3): 77.
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2016Screening for Viral Pathogens in African Simian Bushmeat Seized at A French Airport., Transbound Emerg Dis 2017 Aug; 64(4): 1159-1167.
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2016Viral metagenomics: are we missing the giants?, Curr. Opin. Microbiol. 2016 06;31:34-43.
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2015Faustovirus-Like Asfarvirus in Hematophagous Biting Midges and Their Vertebrate Hosts., Front Microbiol 2015 ; 6(): 1406.
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2015Host-Associated Metagenomics: A Guide to Generating Infectious RNA Viromes., PLoS One 2015 ; 10(10): e0139810.
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2014First molecular detection of Rickettsia africae in ticks from the Union of the Comoros., Parasit Vectors 2014 Sep; 7(): 444.
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2014Viral metagenomics on animals as a tool for the detection of zoonoses prior to human infection?, Int J Mol Sci 2014 Jun; 15(6): 10377-97.
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2013Describing the silent human virome with an emphasis on giant viruses., Intervirology 2013 ; 56(6): 395-412.
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2013Development of real-time RT-PCR for the detection of low concentrations of Rift Valley fever virus., J Virol Methods 2014 Jan; 195(): 92-9.
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2012High prevalence of hepatitis E in humans and pigs and evidence of genotype-3 virus in swine, Madagascar., Am J Trop Med Hyg 2013 Feb; 88(2): 329-38.
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2012Pathogenic Leptospira spp. in bats, Madagascar and Union of the Comoros., Emerg Infect Dis 2012 Oct; 18(10): 1696-8.
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2012Influenza A(H1N1)pdm09 virus in pigs, Réunion Island., Emerg Infect Dis 2012 Oct; 18(10): 1665-8.
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2012Adhesion of human pathogenic enteric viruses and surrogate viruses to inert and vegetal food surfaces., Food Microbiol 2012 Oct; 32(1): 48-56.
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2012Intense co-circulation of non-influenza respiratory viruses during the first wave of pandemic influenza pH1N1/2009: a cohort study in Reunion Island., PLoS One 2012 ; 7(9): e44755.
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2012Identification of novel paramyxoviruses in insectivorous bats of the Southwest Indian Ocean., Virus Res 2012 Dec; 170(1-2): 159-63.
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2012Molecular evolutionary analysis of pH1N1 2009 influenza virus in Reunion Island, South West Indian Ocean region: a cohort study., PLoS One 2012 ; 7(8): e43742.
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2011Pandemic influenza due to pH1N1/2009 virus: estimation of infection burden in Reunion Island through a prospective serosurvey, austral winter 2009., PLoS One 2011 ; 6(9): e25738.
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2011Comparison of chlorine and peroxyacetic-based disinfectant to inactivate Feline calicivirus, Murine norovirus and Hepatitis A virus on lettuce., Int J Food Microbiol 2011 Nov; 151(1): 98-104.
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2010A predictive microbiology approach for thermal inactivation of Hepatitis A virus in acidified berries., Food Microbiol 2010 Oct; 27(7): 962-7.
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2009Massilia virus, a novel Phlebovirus (Bunyaviridae) isolated from sandflies in the Mediterranean., Vector Borne Zoonotic Dis 2009 Oct; 9(5): 519-30.
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2009Development and validation of real-time one-step reverse transcription-PCR for the detection and typing of dengue viruses., J Clin Virol 2009 May; 45(1): 61-6.
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2008Sandfly fever Sicilian virus, Algeria., Emerg Infect Dis 2008 May; 14(5): 795-7.
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2007Cocirculation of 2 genotypes of Toscana virus, southeastern France., Emerg Infect Dis 2007 Mar; 13(3): 465-8.
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2007A real-time RT-PCR method for the universal detection and identification of flaviviruses, Vector Borne Zoonotic Dis. 2007;7(4):467-77.
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2007Long PCR Product Sequencing (LoPPS): a shotgun-based approach to sequence long PCR products., Nat Protoc 2007 ; 2(2): 340-6.
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2007Alkhurma hemorrhagic fever virus in Ornithodoros savignyi ticks., Emerg Infect Dis 2007 Jan; 13(1): 153-5.
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2006Toscana virus RNA in Sergentomyia minuta files., Emerg Infect Dis 2006 Aug; 12(8): 1299-300.
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2006LoPPS: a long PCR product sequencing method for rapid characterisation of long amplicons., Biochem Biophys Res Commun 2006 Jun; 344(4): 1080-5.