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2024Fibronectin induces a transition from amoeboid to a fan morphology and modifies migration in Entamoeba histolytica., PLoS Pathog 2024 Jul; 20(7): e1012392.
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2024Time-Series Analysis of Cellular Shapes Using Transported Velocity Fields, SSRN.
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2023Encystation and Stress Responses under the Control of Ubiquitin-like Proteins in Pathogenic Amoebae, Microorganisms.
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20224D live imaging and computational modeling of a functional gut-on-a-chip evaluate how peristalsis facilitates enteric pathogen invasion., Science advances.
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2022PDE-Constrained Optimization for Nuclear Mechanics, 2022 IEEE International Conference on Image Processing (ICIP).
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2022Domain Adapted Multi-task Learning For Segmenting Amoeboid Cells in Microscopy, IEEE Transactions on Medical Imaging, 2022.
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2022PI Kinase-EhGEF2-EhRho5 axis contributes to LPA stimulated macropinocytosis in Entamoeba histolytica, PLoS Pathog 18(5): e1010550.
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2022Characterizing Cell Populations Using Statistical Shape Modes, 2022 IEEE 19th International Symposium on Biomedical Imaging (ISBI).
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2021Dynamic Shape Modeling to Analyze Modes ofMigration During Cell Motility, arXiv.org.
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2021A Min-Max Based Hyperparameter Estimation For Domain-Adapted Segmentation Of Amoeboid Cells, 2021 IEEE 18th International Symposium on Biomedical Imaging (ISBI).
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2020Modeling Shape Dynamics During Cell Motility in Microscopy Videos, 2020 IEEE International Conference on Image Processing (ICIP), Abu Dhabi, United Arab Emirates, 2020, .
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2020Learning to segment clustered amoeboid cells from brightfield microscopy via multi-task learning with adaptive weight selection, 2020 25th International Conference on Pattern Recognition (ICPR).
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2017Crosstalk between Entamoeba histolytica and the human intestinal tract during amoebiasis, 2019 Aug;146(9):1140-1149.
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2017BioFlow: a non-invasive, image-based method to measure speed, pressure and forces inside living cells., Sci Rep 2017 08; 7(1): 9178.
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2015In Entamoeba histolytica, a BspA family protein is required for chemotaxis toward tumour necrosis factor, Microb Cell. 2015 Jul 6;2(7):235-246.
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2014The parasite Entamoeba histolytica exploits the activities of human matrix metalloproteinases to invade colonic tissue, Nat Commun 2014;5:5142.
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2013Identification of the virulence landscape essential for Entamoeba histolytica invasion of the human colon, PLoS Pathog. 2013;9(12):e1003824.
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2012Newly visualized fibrillar collagen scaffolds dictate Entamoeba histolytica invasion route in the human colon, Cell. Microbiol. 2012 May;14(5):609-21.
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20103-D active meshes: fast discrete deformable models for cell tracking in 3-D time-lapse microscopy, IEEE Trans Image Process 2011 Jul;20(7):1925-37.
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2009An ex-vivo human intestinal model to study Entamoeba histolytica pathogenesis, PLoS Negl Trop Dis 2009 Nov;3(11):e551.
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2008Chemotaxis of Entamoeba histolytica towards the pro-inflammatory cytokine TNF is based on PI3K signalling, cytoskeleton reorganization and the Galactose/N-acetylgalactosamine lectin activity, Cell. Microbiol. 2008 Aug;10(8):1676-86.
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2006Human tumor necrosis factor is a chemoattractant for the parasite Entamoeba histolytica, Infect. Immun. 2006 Feb;74(2):1407-11.
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2006Host tissue invasion by Entamoeba histolytica is powered by motility and phagocytosis, Arch. Med. Res. 2006 Feb;37(2):253-8.
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2004Calcium binding protein 1 of the protozoan parasite Entamoeba histolytica interacts with actin and is involved in cytoskeleton dynamics, J. Cell. Sci. 2004 Jul;117(Pt 16):3625-34.
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2003EhPAK, a member of the p21-activated kinase family, is involved in the control of Entamoeba histolytica migration and phagocytosis, J. Cell. Sci. 2003 Jan;116(Pt 1):61-71.
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2002Segmentation and tracking of migrating cells in videomicroscopy with parametric active contours: a tool for cell-based drug testing, IEEE Trans Med Imaging 2002 Oct;21(10):1212-21.