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2020A dynamic, ring-forming MucB / RseB-like protein influences spore shape in Bacillus subtilis., PLoS Genet 2020 12; 16(12): e1009246.
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2020Genome-wide analysis of the Firmicutes illuminates the diderm/monoderm transition., Nat Ecol Evol 2020 Oct 19. Online ahead of print.
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2020Autotransporters drive biofilm formation and auto-aggregation in the diderm Firmicute Veillonella parvula, J Bacteriol . 2020 Aug 17;JB.00461-20. doi: 10.1128/JB.00461-20. Online ahead of print. .
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2020One or two membranes? Diderm Firmicutes challenge the Gram-positive/Gram-negative divide., Mol. Microbiol. 2020 03; 113(3): 659-671.
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2020Transient Dynamics of Archaea and Bacteria in Sediments and Brine Across a Salinity Gradient in a Solar Saltern of Goa, India., Front Microbiol 2020 ; 11(): 1891.
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2019The phytopathogenic nature of Dickeya aquatica 174/2 and the dynamic early evolution of Dickeya pathogenicity, Environ. Microbiol. 2019 Aug;21(8):2809-2835.
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2019Comparative genomics and proteogenomics highlight key molecular players involved in Frankia sporulation, Res. Microbiol. 2019 Jun - Aug;170(4-5):202-213.
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2019New insights into the pelagic microorganisms involved in the methane cycle in the meromictic Lake Pavin through metagenomics, FEMS Microbiol. Ecol. 2019 Mar;95(3).
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2019Draft genome sequences for three unisolated Alnus-infective Frankia Sp+ strains, AgTrS, AiOr and AvVan, the first sequenced Frankia strains able to sporulate in-planta., J Genomics 2019 ; 7(): 50-55.
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2018Extreme halophilic archaea derive from two distinct methanogen Class II lineages, Mol. Phylogenet. Evol. 2018 Apr;127:46-54.
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2017The Environmental Acinetobacter baumannii Isolate DSM30011 Reveals Clues into the Preantibiotic Era Genome Diversity, Virulence Potential, and Niche Range of a Predominant Nosocomial Pathogen, Genome Biol Evol 2017 09;9(9):2292-2307.
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2017Active microorganisms thrive among extremely diverse communities in cloud water, PLoS ONE 2017;12(8):e0182869.
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2017Deciphering biodiversity and interactions between bacteria and microeukaryotes within epilithic biofilms from the Loue River, France, Sci Rep 2017 Jun;7(1):4344.
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2017Overview of freshwater microbial eukaryotes diversity: a first analysis of publicly available metabarcoding data, FEMS Microbiol. Ecol. 2017 04;93(4).
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2016Chronic Polyaromatic Hydrocarbon (PAH) Contamination Is a Marginal Driver for Community Diversity and Prokaryotic Predicted Functioning in Coastal Sediments, Front Microbiol 2016;7:1303.
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2015Temporal Dynamics of Active Prokaryotic Nitrifiers and Archaeal Communities from River to Sea, Microb. Ecol. 2015 Aug;70(2):473-83.
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2015Temporal dynamics of active Archaea in oxygen-depleted zones of two deep lakes, Environ Microbiol Rep 2015 Apr;7(2):321-9.
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2013Structure of the rare archaeal biosphere and seasonal dynamics of active ecotypes in surface coastal waters, Proc. Natl. Acad. Sci. U.S.A. 2013 Apr;110(15):6004-9.
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2013Geographic distance and ecosystem size determine the distribution of smallest protists in lacustrine ecosystems, FEMS Microbiol. Ecol. 2013 Jul;85(1):85-94.
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2013Phylogenetic affiliation of SSU rRNA genes generated by massively parallel sequencing: new insights into the freshwater protist diversity, PLoS ONE 2013;8(3):e58950.
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2013Short-term dynamics of diversity patterns: evidence of continual reassembly within lacustrine small eukaryotes, Environ. Microbiol. 2013 Jun;15(6):1745-58.