• 2024
  Defard T, Laporte H, Ayan M, Soulier J, Curras-Alonso S, Weber C, Massip F, Londoño-Vallejo JA, Fouillade C, Mueller F, Walter T, A point cloud segmentation framework for image-based spatial transcriptomics., Commun Biol 2024 Jul; 7(1): 823.
• 2023
  Curras-Alonso S, Soulier J, Defard T, Weber C, Heinrich S, Laporte H, Leboucher S, Lameiras S, Dutreix M, Favaudon V, Massip F, Walter T, Mueller F, Londoño-Vallejo JA, Fouillade C, , An interactive murine single-cell atlas of the lung responses to radiation injury., Nat Commun 2023 Apr; 14(1): 2445.
• 2022
  Rensen E, Pietropaoli S, Mueller F, Weber C, Souquere S, Sommer S, Isnard P, Rabant M, Gibier JB, Terzi F, Simon-Loriere E, Rameix-Welti MA, Pierron G, Barba-Spaeth G, Zimmer C, Sensitive visualization of SARS-CoV-2 RNA with CoronaFISH., Life Sci Alliance 2022 Apr; 5(4): .
• 2022
  Damien Mornico, Chung-Chau Hon, Mikael Koutero, Christian Weber, Jean-Yves Coppée, C Graham Clark, Marie-Agnes Dillies and Nancy Guillén, RNA Sequencing Reveals Widespread Transcription of Natural Antisense RNAs in Entamoeba Species, Microorganisms.
• 2021
  Hao X, Parmar JJ, Lelandais B, Aristov A, Ouyang W, Weber C, Zimmer C, , Super-resolution visualization and modeling of human chromosomal regions reveals cohesin-dependent loop structures., Genome Biol 2021 May; 22(1): 150.
• 2020
  Mornico D, Hon CC, Koutero M, Weber C, Coppee JY, Dillies MA, Guillen N, , Genomic determinants for initiation and length of natural antisense transcripts in Entamoeba histolytica., Sci Rep 2020 11; 10(1): 20190.
• 2018
  Ospina-Villa JD, Dufour A, Weber C, Ramirez-Moreno E, Zamorano-Carrillo A, Guillen N, Lopez-Camarillo C, Marchat LA, Targeting the polyadenylation factor EhCFIm25 with RNA aptamers controls survival in Entamoeba histolytica, Sci Rep. 2018 Apr 9;8(1):5720.
• 2016
  Christian Weber, Mikael Koutero, Marie-Agnes Dillies, Hugo Varet, Cesar Lopez-Camarillo, Jean Yves Coppée, Chung-Chau Hon, Nancy Guillén, Extensive transcriptome analysis correlates the plasticity of Entamoeba histolytica pathogenesis to rapid phenotype changes depending on the environment, Sci Rep. 2016 Oct 21;6:35852. doi: 10.1038/srep35852..
• 2016
  Tsanov N, Samacoits A, Chouaib R, Traboulsi AM, Gostan T, Weber C, Zimmer C, Zibara K, Walter T, Peter M, Bertrand E, Mueller F, smiFISH and FISH-quant – a flexible single RNA detection approach with super-resolution capability, Nucleic Acids Res. 2016 12;44(22):e165.
• 2016
  Cruz OH, Marchat LA, Guillén N, Weber C, Rosas IL, Díaz-Chávez J, Herrera L, Rojo-Domínguez A, Orozco E, López-Camarillo C, Multinucleation and Polykaryon Formation is Promoted by the EhPC4 Transcription Factor in Entamoeba histolytica, Sci Rep 2016;6:19611.
• 2014
  López-Rosas I, Marchat LA, Olvera BG, Guillen N, Weber C, Hernández de la Cruz O, Ruíz-García E, Astudillo-de la Vega H, López-Camarillo C, Proteomic analysis identifies endoribouclease EhL-PSP and EhRRP41 exosome protein as novel interactors of EhCAF1 deadenylase, J Proteomics 2014 Dec;111:59-73.
• 2014
  Mfotie Njoya E, Weber C, Hernandez-Cuevas NA, Hon CC, Janin Y, Kamini MF, Moundipa PF, Guillén N, Bioassay-guided fractionation of extracts from Codiaeum variegatum against Entamoeba histolytica discovers compounds that modify expression of ceramide biosynthesis related genes, PLoS Negl Trop Dis 2014;8(1):e2607.
• 2013
  Thibeaux R, Weber C, Hon CC, Dillies MA, Avé P, Coppée JY, Labruyère E, Guillén N, Identification of the virulence landscape essential for Entamoeba histolytica invasion of the human colon, PLoS Pathog. 2013;9(12):e1003824.
• 2013
  Hon CC, Weber C, Sismeiro O, Proux C, Koutero M, Deloger M, Das S, Agrahari M, Dillies MA, Jagla B, Coppee JY, Bhattacharya A, Guillen N, Quantification of stochastic noise of splicing and polyadenylation in Entamoeba histolytica, Nucleic Acids Res. 2013 Feb;41(3):1936-52.
• 2012
  Baumel-Alterzon S, Weber C, Guillén N, Ankri S, Identification of dihydropyrimidine dehydrogenase as a virulence factor essential for the survival of Entamoeba histolytica in glucose-poor environments, Cell. Microbiol. 2013 Jan;15(1):130-44.
• 2012
  López-Rosas I, Orozco E, Marchat LA, García-Rivera G, Guillen N, Weber C, Carrillo-Tapia E, Hernández de la Cruz O, Pérez-Plasencia C, López-Camarillo C, mRNA decay proteins are targeted to poly(A)+ RNA and dsRNA-containing cytoplasmic foci that resemble P-bodies in Entamoeba histolytica, PLoS ONE 2012;7(9):e45966.
• 2012
  Santi-Rocca J, Smith S, Weber C, Pineda E, Hon CC, Saavedra E, Olivos-García A, Rousseau S, Dillies MA, Coppée JY, Guillén N, Endoplasmic reticulum stress-sensing mechanism is activated in Entamoeba histolytica upon treatment with nitric oxide, PLoS ONE 2012;7(2):e31777.
• 2011
  Marquay Markiewicz J, Syan S, Hon CC, Weber C, Faust D, Guillen N, A proteomic and cellular analysis of uropods in the pathogen Entamoeba histolytica, PLoS Negl Trop Dis 2011;5(4):e1002.
• 2009
  Solis CF, Santi-Rocca J, Perdomo D, Weber C, Guillén N, Use of bacterially expressed dsRNA to downregulate Entamoeba histolytica gene expression, PLoS ONE 2009;4(12):e8424.
• 2009
  López-Camarillo C, Lopez-Casamichana M, Weber C, Guillen N, Orozco E, Marchat LA, DNA repair mechanisms in eukaryotes: Special focus in Entamoeba histolytica and related protozoan parasites, Infect. Genet. Evol. 2009 Dec;9(6):1051-6.
• 2008
  Weber C, Marchat LA, Guillen N, López-Camarillo C, Effects of DNA damage induced by UV irradiation on gene expression in the protozoan parasite Entamoeba histolytica, Mol. Biochem. Parasitol. 2009 Apr;164(2):165-9.
• 2008
  Marchat LA, Orozco E, Guillen N, Weber C, López-Camarillo C, Putative DEAD and DExH-box RNA helicases families in Entamoeba histolytica, Gene 2008 Nov;424(1-2):1-10.
• 2008
  Blazquez S, Guigon G, Weber C, Syan S, Sismeiro O, Coppée JY, Labruyère E, Guillén N, Chemotaxis of Entamoeba histolytica towards the pro-inflammatory cytokine TNF is based on PI3K signalling, cytoskeleton reorganization and the Galactose/N-acetylgalactosamine lectin activity, Cell. Microbiol. 2008 Aug;10(8):1676-86.
• 2008
  Zamorano A, López-Camarillo C, Orozco E, Weber C, Guillen N, Marchat LA, In silico analysis of EST and genomic sequences allowed the prediction of cis-regulatory elements for Entamoeba histolytica mRNA polyadenylation, Comput Biol Chem 2008 Aug;32(4):256-63.
• 2008
  Weber C, Blazquez S, Marion S, Ausseur C, Vats D, Krzeminski M, Rigothier MC, Maroun RC, Bhattacharya A, Guillén N, Bioinformatics and functional analysis of an Entamoeba histolytica mannosyltransferase necessary for parasite complement resistance and hepatical infection, PLoS Negl Trop Dis 2008;2(2):e165.
• 2007
  Santi-Rocca J, Weber C, Guigon G, Sismeiro O, Coppée JY, Guillén N, The lysine- and glutamic acid-rich protein KERP1 plays a role in Entamoeba histolytica liver abscess pathogenesis, Cell. Microbiol. 2008 Jan;10(1):202-17.
• 2007
  Clark CG, Alsmark UC, Tazreiter M, Saito-Nakano Y, Ali V, Marion S, Weber C, Mukherjee C, Bruchhaus I, Tannich E, Leippe M, Sicheritz-Ponten T, Foster PG, Samuelson J, Noël CJ, Hirt RP, Embley TM, Gilchrist CA, Mann BJ, Singh U, Ackers JP, Bhattacharya S, Bhattacharya A, Lohia A, Guillén N, Duchêne M, Nozaki T, Hall N, Structure and content of the Entamoeba histolytica genome, Adv. Parasitol. 2007;65:51-190.
• 2006
  Weber C, Guigon G, Bouchier C, Frangeul L, Moreira S, Sismeiro O, Gouyette C, Mirelman D, Coppee JY, Guillén N, Stress by heat shock induces massive down regulation of genes and allows differential allelic expression of the Gal/GalNAc lectin in Entamoeba histolytica, Eukaryotic Cell 2006 May;5(5):871-5.
• 2005
  Loftus B, Anderson I, Davies R, Alsmark UC, Samuelson J, Amedeo P, Roncaglia P, Berriman M, Hirt RP, Mann BJ, Nozaki T, Suh B, Pop M, Duchene M, Ackers J, Tannich E, Leippe M, Hofer M, Bruchhaus I, Willhoeft U, Bhattacharya A, Chillingworth T, Churcher C, Hance Z, Harris B, Harris D, Jagels K, Moule S, Mungall K, Ormond D, Squares R, Whitehead S, Quail MA, Rabbinowitsch E, Norbertczak H, Price C, Wang Z, Guillén N, Gilchrist C, Stroup SE, Bhattacharya S, Lohia A, Foster PG, Sicheritz-Ponten T, Weber C, Singh U, Mukherjee C, El-Sayed NM, Petri WA, Clark CG, Embley TM, Barrell B, Fraser CM, Hall N, The genome of the protist parasite Entamoeba histolytica, Nature 2005 Feb;433(7028):865-8.
• 2004
  Vayssié L, Vargas M, Weber C, Guillén N, Double-stranded RNA mediates homology-dependent gene silencing of gamma-tubulin in the human parasite Entamoeba histolytica, Mol. Biochem. Parasitol. 2004 Nov;138(1):21-8.