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2023Depletion of slow-cycling PDGFRα+ADAM12+ mesenchymal cells promotes antitumor immunity by restricting macrophage efferocytosis., Nat Immunol 2023 Oct; (): .
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2023Factors Associated with Carriage of Enteropathogenic and Non-Enteropathogenic Viruses: A Reanalysis of Matched Case-Control Data from the AFRIBIOTA Site in Antananarivo, Madagascar., Pathogens 2023 Aug; 12(8): .
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2023Gallocin A, an Atypical Two-Peptide Bacteriocin with Intramolecular Disulfide Bonds Required for Activity., Microbiol Spectr 2023 Mar; (): e0508522.
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2023The eukaryome of African children is influenced by geographic location, gut biogeography, and nutritional status., Microlife 2023 ; 4(): uqad033.
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2023Interspecies comparison of the early transcriptomic changes associated with hepatitis B virus exposure in human and macaque immune cell populations., Front Cell Infect Microbiol 2023 ; 13(): 1248782.
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2022Tuning of Gene Expression in Clostridium phytofermentans Using Synthetic Promoters and CRISPRi., ACS Synth Biol 2022 Dec; 11(12): 4077-4088.
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2022Capturing SARS-CoV-2 from patient samples with low viral abundance: a comparative analysis, 2022 12:19274.
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2022Putative Biomarkers of Environmental Enteric Disease Fail to Correlate in a Cross-Sectional Study in Two Study Sites in Sub-Saharan Africa., Nutrients 2022 Aug; 14(16): .
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2022Factors associated with anaemia among preschool- age children in underprivileged neighbourhoods in Antananarivo, Madagascar., BMC Public Health 2022 07; 22(1): 1320.
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2022High prevalence of small intestine bacteria overgrowth and asymptomatic carriage of enteric pathogens in stunted children in Antananarivo, Madagascar., PLoS Negl Trop Dis 2022 May; 16(5): e0009849.
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2022Reassembling a cannon in the DNA defense arsenal: Genetics of StySA, a BREX phage exclusion system in Salmonella lab strains., PLoS Genet 2022 Apr; 18(4): e1009943.
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2022JC Polyomavirus whole genome sequencing at the single molecule level reveals emerging neurotropic populations in Progressive Multifocal Leucoencephalopathy, J. Infect. Dis..
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2021Investigating the role of the carbon storage regulator A (CsrA) Leptospira spp., PLoS One . 2021 Dec 13;16(12):e0260981.
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2021Rapid identification of methylase specificity (RIMS-seq) jointly identifies methylated motifs and generates shotgun sequencing of bacterial genomes., Nucleic Acids Res 2021 Nov; 49(19): e113.
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2021How Did Institut Pasteur’s NGS Core Facility, Biomics, Manage the Coronavirus Disease 2019 Crisis?, J Biomol Tech 2021 07; 32(2): 50-56.
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2021RNase R is associated in a functional complex with the RhpA DEAD-box RNA helicase in Helicobacter pylori., Nucleic Acids Res 2021 49:5249-5264.
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2021High prevalence of intestinal parasite infestations among stunted and control children aged 2 to 5 years old in two neighborhoods of Antananarivo, Madagascar., PLoS Negl Trop Dis 2021 04; 15(4): e0009333.
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2021Nondestructive enzymatic deamination enables single-molecule long-read amplicon sequencing for the determination of 5-methylcytosine and 5-hydroxymethylcytosine at single-base resolution., Genome Res 2021 Jan; 31(2): 291-300.
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2021Broad spectrum compounds targeting early stages of RABV infection, Antiviral Res 188 (2021) 105016.
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2020SHAMAN: a user-friendly website for metataxonomic analysis from raw reads to statistical analysis., BMC Bioinformatics 2020 Aug; 21(1): 345.
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2020Immunoglobulin recognition of fecal bacteria in stunted and non-stunted children: findings from the Afribiota study., Microbiome 2020 07; 8(1): 113.
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2019IFN-Stimulated Genes in Zebrafish and Humans Define an Ancient Arsenal of Antiviral Immunity., J. Immunol. 2019 12; 203(12): 3361-3373.
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2019Transcriptional profiling of a laboratory and clinical Mycobacterium tuberculosis strain suggests respiratory poisoning upon exposure to delamanid, Tuberculosis (Edinb) 2019 Jul;117:18-23.
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2017Imaging of viral neuroinvasion in the zebrafish reveals that Sindbis and chikungunya viruses favour different entry routes., Dis Model Mech 2017 Jul; 10(7): 847-857.
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2017FTR83, a Member of the Large Fish-Specific finTRIM Family, Triggers IFN Pathway and Counters Viral Infection., Front Immunol 2017 ; 8(): 617.
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2015Multilocus sequence analysis of the genus Citrobacter and description of Citrobacter pasteurii sp. nov., Int J Syst Evol Microbiol 2015 May; 65(Pt 5): 1486-1490.
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2015Characterization of samhd1 morphant zebrafish recapitulates features of the human type I interferonopathy Aicardi-Goutières syndrome., J. Immunol. 2015 Mar; 194(6): 2819-25.
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2014Contrasted innate responses to two viruses in zebrafish: insights into the ancestral repertoire of vertebrate IFN-stimulated genes., J. Immunol. 2014 May; 192(9): 4328-41.
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2013Real-time whole-body visualization of Chikungunya Virus infection and host interferon response in zebrafish., PLoS Pathog. 2013 ; 9(9): e1003619.
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2013Lactobacillus pasteurii sp. nov. and Lactobacillus hominis sp. nov., Int J Syst Evol Microbiol 2013 Jan; 63(Pt 1): 53-59.
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2012Lactobacillus gigeriorum sp. nov., isolated from chicken crop., Int J Syst Evol Microbiol 2012 Feb; 62(Pt 2): 330-334.
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2011Whole-body analysis of a viral infection: vascular endothelium is a primary target of infectious hematopoietic necrosis virus in zebrafish larvae., PLoS Pathog. 2011 Feb; 7(2): e1001269.
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2009Pseudomonas brassicacearum subsp. neoaurantiaca subsp. nov., orange-pigmented bacteria isolated from soil and the rhizosphere of agricultural plants., Int J Syst Evol Microbiol 2009 Oct; 59(Pt 10): 2476-81.
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2007Origins and unconventional behavior of neutrophils in developing zebrafish., Blood 2008 Jan; 111(1): 132-41.
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2006Tracing hematopoietic precursor migration to successive hematopoietic organs during zebrafish development., Immunity 2006 Dec; 25(6): 963-75.
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2004Oxidative stress response in Clostridium perfringens., Microbiology (Reading, Engl.) 2004 Jun; 150(Pt 6): 1649-1659.
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2001Airway administration of Escherichia coli endotoxin to mice induces glucocorticosteroid-resistant bronchoconstriction and vasopermeation., Am J Respir Cell Mol Biol 2001 Mar; 24(3): 345-51.