• 2023
  Duitama González C, Vicedomini R, Lemane T, Rascovan N, Richard H, Chikhi R, decOM: similarity-based microbial source tracking of ancient oral samples using k-mer-based methods., Microbiome 2023 Nov; 11(1): 243.
• 2023
  Maxime Borry, Adrian Forsythe, Aida Andrades Valtueña, Alexander Hübner, Anan Ibrahim, Andrea Quagliariello, Anna E White, Arthur Kocher, Bjørn Peare Bartholdy, Diāna Spurīte, Gabriel Yaxal Ponce-Soto, Gunnar Neumann, I-Ting Huang, Ian Light, Irina M Velsko, Iseult Jackson, Jasmin Frangenberg, Javier G Serrano, Julien Fumey, Kadir T Özdoğan, Kelly E Blevins, Kevin G Daly, Maria Lopopolo, Markella Moraitou, Megan Michel, Meriam van Os, Miriam J Bravo-Lopez, Mohamed S Sarhan, Nihan D Dagtas, Nikolay Oskolkov, Olivia S Smith, Ophélie Lebrasseur, Piotr Rozwalak, Raphael Eisenhofer, Sally Wasef, Shreya L Ramachandran, Valentina Vanghi, Christina Warinner, James A Fellows Yates, Facilitating accessible, rapid, and appropriate processing of ancient metagenomic data with AMDirT, F1000Research, 2023, 12, pp.926. ⟨10.12688/f1000research.134798.1⟩.
• 2023
  Legendre L, Rode J, Germon I, Pavie M, Quiviger C, Policarpo M, Leclercq J, Père S, Fumey J, Hyacinthe C, Ornelas-García P, Espinasa L, Rétaux S, Casane D, Genetic identification and reiterated captures suggest that the Astyanax mexicanus El Pachón cavefish population is closed and declining., Zool Res 2023 Jul; 44(4): 701-711.
• 2022
  Foresto E, Revale S, Primo E, Nievas F, Carezzano E, Puente M, Alzari P, Martínez M, Ben-Assaya M, Mornico D, Santoro M, Martínez-Abarca F, Giordano W, Bogino P, , Complete Genome Sequence of Mesorhizobium ciceri Strain R30, a Rhizobium Used as a Commercial Inoculant for Chickpea in Argentina., Microbiol Resour Announc 2022 Nov; 11(11): e0077922.
• 2022
  Nievas F, Revale S, Foresto E, Cossovich S, Puente M, Alzari P, Martínez M, Ben-Assaya M, Mornico D, Santoro M, Martínez-Abarca F, Giordano W, Bogino P, , Complete Genome Sequence of Bradyrhizobium sp. Strain C-145, a Nitrogen-Fixing Rhizobacterium Used as a Peanut Inoculant in Argentina., Microbiol Resour Announc 2022 Aug; 11(8): e0050522.
• 2022
  Planas D, Saunders N, Maes P, Guivel-Benhassine F, Planchais C, Buchrieser J, Bolland WH, Porrot F, Staropoli I, Lemoine F, Péré H, Veyer D, Puech J, Rodary J, Baele G, Dellicour S, Raymenants J, Gorissen S, Geenen C, Vanmechelen B, Wawina-Bokalanga T, Martí-Carreras J, Cuypers L, Sève A, Hocqueloux L, Prazuck T, Rey FA, Simon-Loriere E, Bruel T, Mouquet H, André E, Schwartz O, , Considerable escape of SARS-CoV-2 Omicron to antibody neutralization., Nature 2022 Feb; 602(7898): 671-675.
• 2021
  Rascovan N, Drancourt M, Desnues C, , [Ancient Yersinia pestis genomes for tracing the origins and spreading of plague past epidemics]., Med Sci (Paris) ; 32(8-9): 681-3.
• 2021
  Thannesberger J, Rascovan N, Eisenmann A, Klymiuk I, Zittra C, Fuehrer HP, Scantlebury-Manning T, Gittens-St Hilaire M, Austin S, Landis RC, Steininger C, , Viral metagenomics reveals the presence of novel Zika virus variants in Aedes mosquitoes from Barbados., Parasit Vectors 2021 Jun; 14(1): 343.
• 2021
  Danko D, Bezdan D, Afshin EE, Ahsanuddin S, Bhattacharya C, Butler DJ, Chng KR, Donnellan D, Hecht J, Jackson K, Kuchin K, Karasikov M, Lyons A, Mak L, Meleshko D, Mustafa H, Mutai B, Neches RY, Ng A, Nikolayeva O, Nikolayeva T, Png E, Ryon KA, Sanchez JL, Shaaban H, Sierra MA, Thomas D, Young B, Abudayyeh OO, Alicea J, Bhattacharyya M, Blekhman R, Castro-Nallar E, Cañas AM, Chatziefthimiou AD, Crawford RW, De Filippis F, Deng Y, Desnues C, Dias-Neto E, Dybwad M, Elhaik E, Ercolini D, Frolova A, Gankin D, Gootenberg JS, Graf AB, Green DC, Hajirasouliha I, Hastings JJA, Hernandez M, Iraola G, Jang S, Kahles A, Kelly FJ, Knights K, Kyrpides NC, Łabaj PP, Lee PKH, Leung MHY, Ljungdahl PO, Mason-Buck G, McGrath K, Meydan C, Mongodin EF, Moraes MO, Nagarajan N, Nieto-Caballero M, Noushmehr H, Oliveira M, Ossowski S, Osuolale OO, Özcan O, Paez-Espino D, Rascovan N, Richard H, Rätsch G, Schriml LM, Semmler T, Sezerman OU, Shi L, Shi T, Siam R, Song LH, Suzuki H, Court DS, Tighe SW, Tong X, Udekwu KI, Ugalde JA, Valentine B, Vassilev DI, Vayndorf EM, Velavan TP, Wu J, Zambrano MM, Zhu J, Zhu S, Mason CE, , , A global metagenomic map of urban microbiomes and antimicrobial resistance., Cell 2021 Jun; 184(13): 3376-3393.e17.
• 2020
  Mornico D, Hon CC, Koutero M, Weber C, Coppee JY, Dillies MA, Guillen N, , Genomic determinants for initiation and length of natural antisense transcripts in Entamoeba histolytica., Sci Rep 2020 11; 10(1): 20190.
• 2020
  Thannesberger J, Rascovan N, Eisenmann A, Klymiuk I, Zittra C, Fuehrer HP, Scantlebury-Manning T, Gittens-St Hilaire M, Austin S, Landis RC, Steininger C, , Highly Sensitive Virome Characterization of Aedes aegypti and Culex pipiens Complex from Central Europe and the Caribbean Reveals Potential for Interspecies Viral Transmission., Pathogens 2020 Aug; 9(9): .
• 2019
  Dávila Felipe M, Domelevo Entfellner JB, Lemoine F, Truszkowski J, Gascuel O, , Distribution and asymptotic behavior of the phylogenetic transfer distance., J Math Biol 2019 07; 79(2): 485-508.
• 2019
  Rascovan N, Sjögren KG, Kristiansen K, Nielsen R, Willerslev E, Desnues C, Rasmussen S, , Emergence and Spread of Basal Lineages of Yersinia pestis during the Neolithic Decline., Cell 2019 01; 176(1-2): 295-305.e10.
• 2018
  Vivanco L, Rascovan N, Austin AT, , Plant, fungal, bacterial, and nitrogen interactions in the litter layer of a native Patagonian forest., PeerJ 2018 ; 6(): e4754.
• 2017
  Urbieta MS, Rascovan N, Vázquez MP, Donati E, , Genome analysis of the thermoacidophilic archaeon Acidianus copahuensis focusing on the metabolisms associated to biomining activities., BMC Genomics 2017 06; 18(1): 445.
• 2016
  Rascovan N, Telke A, Raoult D, Rolain JM, Desnues C, , Exploring divergent antibiotic resistance genes in ancient metagenomes and discovery of a novel beta-lactamase family., Environ Microbiol Rep 2016 Oct; 8(5): 886-895.
• 2016
  Rascovan N, Duraisamy R, Desnues C, , Metagenomics and the Human Virome in Asymptomatic Individuals., Annu Rev Microbiol 2016 09; 70(): 125-41.
• 2016
  Asmar S, Rascovan N, Robert C, Drancourt M, , Draft Genome Sequence of Mycobacterium acapulcensis Strain CSURP1424., Genome Announc 2016 Aug; 4(4): .
• 2016
  Rascovan N, Carbonetto B, Perrig D, Díaz M, Canciani W, Abalo M, Alloati J, González-Anta G, Vazquez MP, , Integrated analysis of root microbiomes of soybean and wheat from agricultural fields., Sci Rep 2016 06; 6(): 28084.
• 2016
  Rascovan N, Monteil Bouchard S, Grob JJ, Collet-Villette AM, Gaudy-Marqueste C, Penicaud M, Lepidi H, Raoult D, Desnues C, , Human Polyomavirus-6 Infecting Lymph Nodes of a Patient With an Angiolymphoid Hyperplasia With Eosinophilia or Kimura Disease., Clin Infect Dis 2016 06; 62(11): 1419-21.
• 2016
  Rascovan N, Maldonado J, Vazquez MP, Eugenia Farías M, , Metagenomic study of red biofilms from Diamante Lake reveals ancient arsenic bioenergetics in haloarchaea., ISME J 2016 Feb; 10(2): 299-309.
• 2016
  Rascovan N, Huynh H, Chouin G, Adekola K, Georges-Zimmermann P, Signoli M, Desfosses Y, Aboudharam G, Drancourt M, Desnues C, , Tracing back ancient oral microbiomes and oral pathogens using dental pulps from ancient teeth., NPJ Biofilms Microbiomes 2016 ; 2(): 6.
• 2015
  Asmar S, Rascovan N, Robert C, Drancourt M, , Draft Genome Sequence of Mycobacterium mucogenicum Strain CSUR P2099., Genome Announc 2015 Nov; 3(6): .
• 2015
  Asmar S, Rascovan N, Robert C, Drancourt M, , Draft Genome Sequence of Mycobacterium peregrinum Strain CSUR P2098., Genome Announc 2015 Nov; 3(6): .
• 2014
  Colombo RP, Fernández Bidondo L, Silvani VA, Carbonetto MB, Rascovan N, Bompadre MJ, Pérgola M, Cuenca G, Godeas AM, , Diversity of arbuscular mycorrhizal fungi in soil from the Pampa Ondulada, Argentina, assessed by pyrosequencing and morphological techniques., Can J Microbiol 2014 Dec; 60(12): 819-27.
• 2014
  Urbieta MS, Rascovan N, Castro C, Revale S, Giaveno MA, Vazquez M, Donati ER, , Draft Genome Sequence of the Novel Thermoacidophilic Archaeon Acidianus copahuensis Strain ALE1, Isolated from the Copahue Volcanic Area in Neuquen, Argentina., Genome Announc 2014 May; 2(3): .
• 2014
  Burguener GF, Maldonado MJ, Revale S, Fernández Do Porto D, Rascován N, Vázquez M, Farías ME, Marti MA, Turjanski AG, , Draft Genome Sequence of the Polyextremophilic Halorubrum sp. Strain AJ67, Isolated from Hyperarsenic Lakes in the Argentinian Puna., Genome Announc 2014 Feb; 2(1): .
• 2014
  Carbonetto B, Rascovan N, Álvarez R, Mentaberry A, Vázquez MP, , Structure, composition and metagenomic profile of soil microbiomes associated to agricultural land use and tillage systems in Argentine Pampas., PLoS One 2014 ; 9(6): e99949.
• 2013
  Rascovan N, Carbonetto B, Revale S, Reinert MD, Alvarez R, Godeas AM, Colombo R, Aguilar M, Novas MV, Iannone L, Zelada AM, Pardo A, Schrauf G, Mentaberry A, Vazquez MP, , The PAMPA datasets: a metagenomic survey of microbial communities in Argentinean pampean soils., Microbiome 2013 Jul; 1(1): 21.
• 2013
  Farías ME, Rascovan N, Toneatti DM, Albarracín VH, Flores MR, Poiré DG, Collavino MM, Aguilar OM, Vazquez MP, Polerecky L, , The discovery of stromatolites developing at 3570 m above sea level in a high-altitude volcanic lake Socompa, Argentinean Andes., PLoS One 2013 ; 8(1): e53497.
• 2009
  Schor IE, Rascovan N, Pelisch F, Alló M, Kornblihtt AR, , Neuronal cell depolarization induces intragenic chromatin modifications affecting NCAM alternative splicing., Proc Natl Acad Sci U S A 2009 Mar; 106(11): 4325-30.