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2025STORIES: learning cell fate landscapes from spatial transcriptomics using optimal transport., Nat Methods 2025 Nov; (): .
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2025scPRINT: pre-training on 50 million cells allows robust gene network predictions., Nat Commun 2025 Apr; 16(1): 3607.
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2024scConfluence: single-cell diagonal integration with regularized Inverse Optimal Transport on weakly connected features., Nat Commun 2024 Sep; 15(1): 7762.
