GUIDE
- Left-click and drag the background to move the graph
- Left-click and drag the nodes to reorganize
- Left-click a node to view first level connections
- Double left-click a node to navigate to its page
- Double left-click the background to zoom in
- Right-click the background to zoom out
sigma.utils.pkg('sigma.canvas.nodes');
sigma.canvas.nodes.image = (function() {
var _cache = {},
_loading = {},
_callbacks = {};
// Return the renderer itself:
var renderer = function(node, context, settings) {
var args = arguments,
prefix = settings('prefix') || '',
size = node[prefix + 'size'],
color = node.color || settings('defaultNodeColor'),
url = node.url;
if (_cache[url]) {
context.save();
// Draw the clipping disc:
context.beginPath();
context.arc(
node[prefix + 'x'],
node[prefix + 'y'],
node[prefix + 'size'],
0,
Math.PI * 2,
true
);
context.closePath();
context.clip();
// Draw the image
context.drawImage(
_cache[url],
node[prefix + 'x'] - size,
node[prefix + 'y'] - size,
2 * size,
2 * size
);
// Quit the "clipping mode":
context.restore();
// Draw the border:
context.beginPath();
context.arc(
node[prefix + 'x'],
node[prefix + 'y'],
node[prefix + 'size'],
0,
Math.PI * 2,
true
);
context.lineWidth = 1;
context.strokeStyle = node.color || settings('defaultNodeColor');
context.stroke();
} else {
sigma.canvas.nodes.image.cache(url);
sigma.canvas.nodes.def.apply(
sigma.canvas.nodes,
args
);
}
};
// Let's add a public method to cache images, to make it possible to
// preload images before the initial rendering:
renderer.cache = function(url, callback) {
if (callback)
_callbacks[url] = callback;
if (_loading[url])
return;
var img = new Image();
img.onload = function() {
_loading[url] = false;
_cache[url] = img;
if (_callbacks[url]) {
_callbacks[url].call(this, img);
delete _callbacks[url];
}
};
_loading[url] = true;
img.src = url;
};
return renderer;
})();
var i,
s,
o,
offset_left = 0.5,
N = 1,
E = 40,
C = 5,
d = 0.5,
cs = [],
g = {
nodes: [],
edges: []
};
if (!sigma.classes.graph.hasMethod('neighbors')){
sigma.classes.graph.addMethod('neighbors', function(nodeId) {
var k,
neighbors = {},
index = this.allNeighborsIndex[nodeId] || {};
for (k in index)
neighbors[k] = this.nodesIndex[k];
return neighbors;
});
}
//adding the central node
g.nodes.push({
id: 98090,
label: 'Julia Bos',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2018/07/research_pasteur-picture1-150x150.jpg',
x: 0,
y: 0,
size: 30,
color: '#DDDDDD'
});
var biggest_node_size = 0;
N=6
// adding node
var x_node = Math.cos(2 * 0 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 0 * Math.PI / N) * 10;
g.nodes.push({
id: 232339,
label: 'EVENT: Meeting the EV community @Pasteur – Oct 10, 2024',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/fr/event/meeting-the-ev-community-pasteur-oct-10-2024/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 98090232339,
size: 0.5,
source: 98090,
target: 232339,
});
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 98090) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 23233998090,
size: 0.5,
source: 232339,
target: 98090 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4850,
label: 'Najma Rachidi',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/09/research.pasteur.fr_najma-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/najma-rachidi/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 2323394850,
size: 0.5,
source: 232339,
target: 4850 });
// adding node
var x_node = Math.cos(2 * 1 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 1 * Math.PI / N) * 10;
g.nodes.push({
id: 228247,
label: 'PROJECT: Defense systems in integrons: bacterial weapons in a bank (Definbank)',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/fr/project/defense-systems-in-integrons-bacterial-weapons-in-a-bank-definbank/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 98090228247,
size: 0.5,
source: 98090,
target: 228247,
});
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4541,
label: 'Didier Mazel',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/05/research_pasteur-didier-mazel-img-6478-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/didier-mazel/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 2282474541,
size: 0.5,
source: 228247,
target: 4541 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 98090) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 22824798090,
size: 0.5,
source: 228247,
target: 98090 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 187160,
label: 'Eloi Littner',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2022/09/research_pasteur-eloi-littner-profil-carre-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/eloi-littner/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 228247187160,
size: 0.5,
source: 228247,
target: 187160 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 190676,
label: 'Kevin Debatisse',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2022/11/research_pasteur-debatisse-kevin-web-ip-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/kevin-debatisse/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 228247190676,
size: 0.5,
source: 228247,
target: 190676 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 175967,
label: 'Baptiste Darracq',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2022/02/research_pasteur-baptiste-darracq-darracq-baptiste-web-ip-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/baptiste-darracq/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 228247175967,
size: 0.5,
source: 228247,
target: 175967 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 217913,
label: 'Manon Brunie',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2024/01/research_pasteur-enmanon-bruniefrmanon-brunie-manon-b-1-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/manon-brunie/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 228247217913,
size: 0.5,
source: 228247,
target: 217913 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4684,
label: 'Eduardo Rocha',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/06/research.pasteur.fr_eduardo_rocha-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/eduardo-rocha/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 2282474684,
size: 0.5,
source: 228247,
target: 4684 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 53076,
label: 'Amandine Perrin',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/10/research.pasteur.fr_untitled4-142x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/amandine-perrin/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 22824753076,
size: 0.5,
source: 228247,
target: 53076 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4533,
label: 'Céline Loot',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/09/research.pasteur.fr_img_21712-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/celine-loot/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 2282474533,
size: 0.5,
source: 228247,
target: 4533 });
// adding node
var x_node = Math.cos(2 * 2 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 2 * Math.PI / N) * 10;
g.nodes.push({
id: 199841,
label: 'EVENT: Symposium on Microbial Extracellular Vesicles ; June 15th, 2023 ; Auditorium François Jacob',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/fr/event/extracellular-vesicules-from-microbes-symposium-june-15th-2023-auditorium-francois-jacob/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 98090199841,
size: 0.5,
source: 98090,
target: 199841,
});
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4109,
label: 'Guilhem Janbon',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2017/10/research_pasteur-img_0255r-2-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/guilhem-janbon/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 1998414109,
size: 0.5,
source: 199841,
target: 4109 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4009,
label: 'Carmen Buchrieser',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/06/research.pasteur.fr_carmen1-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/carmen-buchrieser/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 1998414009,
size: 0.5,
source: 199841,
target: 4009 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4287,
label: 'Mart Krupovic',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2019/05/research_pasteur-mart_krupovic-1-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/mart-krupovic/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 1998414287,
size: 0.5,
source: 199841,
target: 4287 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 98090) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 19984198090,
size: 0.5,
source: 199841,
target: 98090 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4355,
label: 'Ivo Gomperts Boneca',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/05/research_pasteur-ivo-gomperts-boneca-p9090188-copie-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/ivo-gomperts-boneca/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 1998414355,
size: 0.5,
source: 199841,
target: 4355 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 78458,
label: 'Virginija Cvirkaite-Krupovic',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2016/10/research.pasteur.fr_vg-2-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/virginija-cvirkaite-krupovic/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 19984178458,
size: 0.5,
source: 199841,
target: 78458 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4850) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 1998414850,
size: 0.5,
source: 199841,
target: 4850 });
// adding node
var x_node = Math.cos(2 * 3 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 3 * Math.PI / N) * 10;
g.nodes.push({
id: 193188,
label: 'PROJECT: MicroVesi (ANR-22-CE35-0014)- Uncovering the functional role of microbial extracellular vesicles in the emergence of antibiotic resistance',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/fr/project/microvesi-anr-22-ce35-0014-uncovering-the-functional-role-of-microbial-extracellular-vesicles-in-the-emergence-of-antibiotic-resistance/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 98090193188,
size: 0.5,
source: 98090,
target: 193188,
});
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 193450,
label: 'Yasmina Abou Haydar',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2023/01/research_pasteur-y.-abou-haydar-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/yasmina-abou-haydar/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 193188193450,
size: 0.5,
source: 193188,
target: 193450 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 98090) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 19318898090,
size: 0.5,
source: 193188,
target: 98090 });
// adding node
var x_node = Math.cos(2 * 4 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 4 * Math.PI / N) * 10;
g.nodes.push({
id: 175610,
label: 'PROJECT: Impact of chromosomal integrons on bacterial life and evolution (Chromintevol)',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/fr/project/impact-of-chromosomal-integrons-on-bacterial-life-and-evolution-chromintevol/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 98090175610,
size: 0.5,
source: 98090,
target: 175610,
});
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 3957,
label: 'David Bikard',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/05/research_pasteur-david-bikard-bikard-david-8746-headshot-copie-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/david-bikard/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 1756103957,
size: 0.5,
source: 175610,
target: 3957 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 125257,
label: 'Richard Egill',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/fr/?post_type=member&p=125257',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 175610125257,
size: 0.5,
source: 175610,
target: 125257 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 98090) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 17561098090,
size: 0.5,
source: 175610,
target: 98090 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 3959,
label: 'Florence Depardieu',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_fig1-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/florence-depardieu/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 1756103959,
size: 0.5,
source: 175610,
target: 3959 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4533) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 1756104533,
size: 0.5,
source: 175610,
target: 4533 });
// adding node
var x_node = Math.cos(2 * 5 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 5 * Math.PI / N) * 10;
g.nodes.push({
id: 6164,
label: 'TEAM: Plasticité du Génome Bactérien',
x: x_node,
y: y_node,
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/09/research.pasteur.fr_mazel-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/team/bacterial-genome-plasticity/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 980906164,
size: 0.5,
source: 98090,
target: 6164,
});
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4533) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 61644533,
size: 0.5,
source: 6164,
target: 4533 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4532,
label: 'Marie-Eve Val',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/05/research_pasteur-marie-eve-val-marie-eve-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/marie-eve-kennedy-val/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 61644532,
size: 0.5,
source: 6164,
target: 4532 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 98090) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 616498090,
size: 0.5,
source: 6164,
target: 98090 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4908,
label: 'Pierre Alexandr Kaminski',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_ha25-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/pierre-alexandr-kaminski/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 61644908,
size: 0.5,
source: 6164,
target: 4908 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4546,
label: 'Evelyne Krin',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/09/research.pasteur.fr_img_1058-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/evelyne-krin/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 61644546,
size: 0.5,
source: 6164,
target: 4546 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 8489,
label: 'Magaly Ducos-Galand',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/09/research.pasteur.fr_img_1057-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/magaly-ducos-galand/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 61648489,
size: 0.5,
source: 6164,
target: 8489 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 245495,
label: 'Sara Carloni',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2025/06/research_pasteur-auto-draft-carloni-sara-150x150.webp',
page_url: 'https://research.pasteur.fr/fr/member/sara-carloni/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 6164245495,
size: 0.5,
source: 6164,
target: 245495 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 183961,
label: 'Pedro Dorado Morales',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2022/07/research_pasteur-dorado-pedro-web-ip-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/pedro-dorado-morales/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 6164183961,
size: 0.5,
source: 6164,
target: 183961 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 190676) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 6164190676,
size: 0.5,
source: 6164,
target: 190676 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 175967) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 6164175967,
size: 0.5,
source: 6164,
target: 175967 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 216519,
label: 'Noa Guzzi',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2024/01/research_pasteur-guzzi-noa-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/noa-guzzi/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 6164216519,
size: 0.5,
source: 6164,
target: 216519 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 193450) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 6164193450,
size: 0.5,
source: 6164,
target: 193450 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 236275,
label: 'Jasmin Ostermayer',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2024/12/research_pasteur-enjasmin-ostermayerfrjasmin-ostermayer-ostermayer-jasmin-150x150.jpeg',
page_url: 'https://research.pasteur.fr/fr/member/jasmin-ostermayer/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 6164236275,
size: 0.5,
source: 6164,
target: 236275 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 217913) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 6164217913,
size: 0.5,
source: 6164,
target: 217913 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 68493,
label: 'Isabelle Hoffmann',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2016/04/research.pasteur.fr_isabelle-hoffmann-150x150.png',
page_url: 'https://research.pasteur.fr/fr/member/hoffmann-isabelle/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 616468493,
size: 0.5,
source: 6164,
target: 68493 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4541) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 61644541,
size: 0.5,
source: 6164,
target: 4541 });
var s = new sigma({
//container: document.getElementById('graph-main'),
graph: g,
renderer: {
// IMPORTANT:
// This works only with the canvas renderer, so the
// renderer type set as "canvas" is necessary here.
container: document.getElementById('graph-main'),
type: 'canvas'
},
settings: {
minNodeSize: 6,
maxNodeSize: 35,
mouseWheelEnabled: false,
font: 'Montserrat',
labelThreshold:25,
borderSize:1,
defaultNodeBorderColor: '#999',
sideMargin:25,
}
});
// We first need to save the original colors of our
// nodes and edges, like this:
s.graph.nodes().forEach(function(n) {
n.originalColor = n.color;
});
s.graph.edges().forEach(function(e) {
e.originalColor = e.color;
});
// When a node is clicked, we check for each node
// if it is a neighbor of the clicked one. If not,
// we set its color as grey, and else, it takes its
// original color.
// We do the same for the edges, and we only keep
// edges that have both extremities colored.
s.bind('clickNode', function(e) {
var nodeId = e.data.node.id,
toKeep = s.graph.neighbors(nodeId);
toKeep[nodeId] = e.data.node;
s.graph.nodes().forEach(function(n) {
if (toKeep[n.id])
n.color = '#35a9f5';
else
n.color = '#dddddd';
});
s.graph.edges().forEach(function(e) {
if (toKeep[e.source] && toKeep[e.target])
e.color = '#35a9f5';
else
e.color = '#dddddd';
});
// Since the data has been modified, we need to
// call the refresh method to make the colors
// update effective.
s.refresh();
});
// When the stage is clicked, we just color each
// node and edge with its original color.
s.bind('clickStage', function(e) {
s.graph.nodes().forEach(function(n) {
n.color = n.originalColor;
});
s.graph.edges().forEach(function(e) {
e.color = e.originalColor;
});
// Same as in the previous event:
s.refresh();
});
s.bind("doubleClickNode", function (e) {
$("#canvas-wrap, .sigma-scene, .sigma-mouse").val();
ajax_load_page( e.data.node.page_url );
});
var c = s.camera;
s.bind("rightClickStage", function (e) {
sigma.misc.animation.camera(c, {
ratio: c.ratio * c.settings('zoomingRatio')
}, {
duration: 200
});
});
// Configure the noverlap layout:
var noverlapListener = s.configNoverlap({
nodeMargin: 10,
scaleNodes: 0.3,
gridSize: 1,
easing: 'quadraticInOut', // animation transition function
duration: 4000 // animation duration. Long here for the purposes of this example only
});
// Bind the events:
noverlapListener.bind('start stop interpolate', function(e) {
//console.log(e.type);
if(e.type === 'start') {
//console.time('noverlap');
}
if(e.type === 'interpolate') {
//console.timeEnd('noverlap');
}
});
// Start the layout:
s.startNoverlap();
//s.refresh();
// Initialize the dragNodes plugin:
var dragListener = sigma.plugins.dragNodes(s, s.renderers[0]);
dragListener.bind('startdrag', function(event) {
});
dragListener.bind('drag', function(event) {
});
dragListener.bind('drop', function(event) {
});
dragListener.bind('dragend', function(event) {
});