GUIDE
- Left-click and drag the background to move the graph
- Left-click and drag the nodes to reorganize
- Left-click a node to view first level connections
- Double left-click a node to navigate to its page
- Double left-click the background to zoom in
- Right-click the background to zoom out
sigma.utils.pkg('sigma.canvas.nodes');
sigma.canvas.nodes.image = (function() {
var _cache = {},
_loading = {},
_callbacks = {};
// Return the renderer itself:
var renderer = function(node, context, settings) {
var args = arguments,
prefix = settings('prefix') || '',
size = node[prefix + 'size'],
color = node.color || settings('defaultNodeColor'),
url = node.url;
if (_cache[url]) {
context.save();
// Draw the clipping disc:
context.beginPath();
context.arc(
node[prefix + 'x'],
node[prefix + 'y'],
node[prefix + 'size'],
0,
Math.PI * 2,
true
);
context.closePath();
context.clip();
// Draw the image
context.drawImage(
_cache[url],
node[prefix + 'x'] - size,
node[prefix + 'y'] - size,
2 * size,
2 * size
);
// Quit the "clipping mode":
context.restore();
// Draw the border:
context.beginPath();
context.arc(
node[prefix + 'x'],
node[prefix + 'y'],
node[prefix + 'size'],
0,
Math.PI * 2,
true
);
context.lineWidth = 1;
context.strokeStyle = node.color || settings('defaultNodeColor');
context.stroke();
} else {
sigma.canvas.nodes.image.cache(url);
sigma.canvas.nodes.def.apply(
sigma.canvas.nodes,
args
);
}
};
// Let's add a public method to cache images, to make it possible to
// preload images before the initial rendering:
renderer.cache = function(url, callback) {
if (callback)
_callbacks[url] = callback;
if (_loading[url])
return;
var img = new Image();
img.onload = function() {
_loading[url] = false;
_cache[url] = img;
if (_callbacks[url]) {
_callbacks[url].call(this, img);
delete _callbacks[url];
}
};
_loading[url] = true;
img.src = url;
};
return renderer;
})();
var i,
s,
o,
offset_left = 0.5,
N = 1,
E = 40,
C = 5,
d = 0.5,
cs = [],
g = {
nodes: [],
edges: []
};
if (!sigma.classes.graph.hasMethod('neighbors')){
sigma.classes.graph.addMethod('neighbors', function(nodeId) {
var k,
neighbors = {},
index = this.allNeighborsIndex[nodeId] || {};
for (k in index)
neighbors[k] = this.nodesIndex[k];
return neighbors;
});
}
//adding the central node
g.nodes.push({
id: 83820,
label: 'Biochimie Membranaire et Transport',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2017/01/research.pasteur.fr_membrane-biochemistry-and-transport-1-150x150.jpg',
x: 0,
y: 0,
size: 30,
color: '#DDDDDD'
});
N=9
var x_node = Math.cos(2 * 0 * Math.PI / N) * 2;
var y_node = Math.sin(2 * 0 * Math.PI / N) * 2;
var biggest_node_size = 0;
//check if content already exist
x_site = Math.cos(2 * 0 * Math.PI / N) * 2;
y_site = Math.sin(2 * 0 * Math.PI / N) * 2;
// adding site
g.nodes.push({
id: 2921,
label: 'Christine Girard-Blanc',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/03/research_pasteur-enchristine-girard-blancfrchristine-girard-blanc-img-20190215-151538-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/christine-girard-blanc/',
x: x_site,
y: y_site,
size: 16,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 838202921,
size: 0.5,
source: 83820,
target: 2921 });
//check if content already exist
x_site = Math.cos(2 * 1 * Math.PI / N) * 2;
y_site = Math.sin(2 * 1 * Math.PI / N) * 2;
// adding site
g.nodes.push({
id: 8423,
label: 'Stéphane Blanchard',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2016/12/research.pasteur.fr_img_20161205_142845-4-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/stephane-blanchard/',
x: x_site,
y: y_site,
size: 16,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 838208423,
size: 0.5,
source: 83820,
target: 8423 });
//check if content already exist
x_site = Math.cos(2 * 2 * Math.PI / N) * 2;
y_site = Math.sin(2 * 2 * Math.PI / N) * 2;
// adding site
g.nodes.push({
id: 87761,
label: 'Jagan Mohan H.D.',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2017/03/research.pasteur.fr_jagan_mohan_update-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/jagan-mohan-h-d/',
x: x_site,
y: y_site,
size: 16,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 8382087761,
size: 0.5,
source: 83820,
target: 87761 });
//check if content already exist
x_site = Math.cos(2 * 3 * Math.PI / N) * 2;
y_site = Math.sin(2 * 3 * Math.PI / N) * 2;
// adding site
g.nodes.push({
id: 126491,
label: 'Sophie Mutricy',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2019/05/research_pasteur-sophie-mutricy-s.-mutricy-photo-badge-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/mutricy-sophie/',
x: x_site,
y: y_site,
size: 16,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 83820126491,
size: 0.5,
source: 83820,
target: 126491 });
//check if content already exist
x_site = Math.cos(2 * 4 * Math.PI / N) * 2;
y_site = Math.sin(2 * 4 * Math.PI / N) * 2;
// adding site
g.nodes.push({
id: 159092,
label: 'Saloni Patel',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2021/05/research_pasteur-saloni-patel-1614851400386-img-20201018-wa00192-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/saloni-patel/',
x: x_site,
y: y_site,
size: 16,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 83820159092,
size: 0.5,
source: 83820,
target: 159092 });
//check if content already exist
x_site = Math.cos(2 * 5 * Math.PI / N) * 2;
y_site = Math.sin(2 * 5 * Math.PI / N) * 2;
// adding site
g.nodes.push({
id: 168744,
label: 'Puck Norell',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2021/10/research_pasteur-puck-norell-243394113-2062278380590411-9196739616777070472-n-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/puck-naman-norell/',
x: x_site,
y: y_site,
size: 16,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 83820168744,
size: 0.5,
source: 83820,
target: 168744 });
//check if content already exist
x_site = Math.cos(2 * 6 * Math.PI / N) * 2;
y_site = Math.sin(2 * 6 * Math.PI / N) * 2;
// adding site
g.nodes.push({
id: 170041,
label: 'Daniele Campisi',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2021/11/research_pasteur-daniele-campisi-1544358976357-150x150.jpeg',
page_url: 'https://research.pasteur.fr/fr/member/daniele-campisi/',
x: x_site,
y: y_site,
size: 16,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 83820170041,
size: 0.5,
source: 83820,
target: 170041 });
//check if content already exist
x_site = Math.cos(2 * 7 * Math.PI / N) * 2;
y_site = Math.sin(2 * 7 * Math.PI / N) * 2;
// adding site
g.nodes.push({
id: 177953,
label: 'Tolgahan Suat Sezen',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2022/03/research_pasteur-tolgahan-suat-sezen-img-9693-150x150.jpeg',
page_url: 'https://research.pasteur.fr/fr/member/tolgahan-suat-sezen/',
x: x_site,
y: y_site,
size: 16,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 83820177953,
size: 0.5,
source: 83820,
target: 177953 });
//check if content already exist
x_site = Math.cos(2 * 8 * Math.PI / N) * 2;
y_site = Math.sin(2 * 8 * Math.PI / N) * 2;
// adding site
g.nodes.push({
id: 83816,
label: 'Thomas Wollert',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2017/01/research.pasteur.fr_portrait-cover-image-1-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/thomas-wollert/',
x: x_site,
y: y_site,
size: 16,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 8382083816,
size: 0.5,
source: 83820,
target: 83816 });
// update positions
x_node = Math.cos(2 * 0 * Math.PI / N) * 10;
y_node = Math.sin(2 * 0 * Math.PI / N) * 10;
N=6
// adding node
var x_node = Math.cos(2 * 0 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 0 * Math.PI / N) * 10;
g.nodes.push({
id: 158469,
label: 'PROGRAM_PROJECT: Maladies de la connectivité cérébrale et maladies neurodégénératives',
x: x_node,
y: y_node,
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2021/05/research_pasteur-enbrain-connectivity-and-neurodegenerative-diseases-frmaladies-de-la-connectivite-cerebrale-et-maladies-neurodenegeratives-institutpasteur-fotolia-89243995-1400px-axe-neuro-150x150.jpeg',
page_url: 'https://research.pasteur.fr/fr/program_project/brain-connectivity-and-neurodegenerative-diseases/',
size: 24,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 83820158469,
size: 0.5,
source: 83820,
target: 158469 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: ,
label: '(EN) Ajax Graph',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/fr/ajax-graph/',
x: x_site,
y: y_site,
size: 10,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 158469,
size: 0.5,
source: 158469,
target: });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4987,
label: 'Chiara Zurzolo',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2018/11/research_pasteur-chiara-zurzolo-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/chiara-zurzolo/',
x: x_site,
y: y_site,
size: 10,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 1584694987,
size: 0.5,
source: 158469,
target: 4987 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 2489,
label: 'David DiGregorio',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/03/david-protrait-2011-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/david-digregorio/',
x: x_site,
y: y_site,
size: 10,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 1584692489,
size: 0.5,
source: 158469,
target: 2489 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4225,
label: 'Gérard Eberl',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_eberl-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/gerard-eberl/',
x: x_site,
y: y_site,
size: 10,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 1584694225,
size: 0.5,
source: 158469,
target: 4225 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 3801,
label: 'Uwe Maskos',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/12/research.pasteur.fr_um_1-3-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/uwe-maskos/',
x: x_site,
y: y_site,
size: 10,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 1584693801,
size: 0.5,
source: 158469,
target: 3801 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 3770,
label: 'Thomas Bourgeron',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/05/research.pasteur.fr_thomas-bourgeron-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/thomas-bourgeron/',
x: x_site,
y: y_site,
size: 10,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 1584693770,
size: 0.5,
source: 158469,
target: 3770 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 94979,
label: 'Florent Haiss',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2017/09/research_pasteur-d41d84dda37815ca0f_l_c08c0-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/florent-haiss/',
x: x_site,
y: y_site,
size: 10,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 15846994979,
size: 0.5,
source: 158469,
target: 94979 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 64150,
label: 'Laure Bally-Cuif',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2016/04/research.pasteur.fr_laure_bally-cuiff-150x150.png',
page_url: 'https://research.pasteur.fr/fr/member/laure-bally-cuif/',
x: x_site,
y: y_site,
size: 10,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 15846964150,
size: 0.5,
source: 158469,
target: 64150 });
// adding node
var x_node = Math.cos(2 * 1 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 1 * Math.PI / N) * 10;
g.nodes.push({
id: 158464,
label: 'PROGRAM_PROJECT: Initiative Cancer',
x: x_node,
y: y_node,
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2021/05/research_pasteur-encancer-initiativefrinitiative-cancer-institutpasteur-i05997-axe-cancer-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/program_project/cancer-initiative/',
size: 24,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 83820158464,
size: 0.5,
source: 83820,
target: 158464 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == ) {
n.size = n.size + 10;
if ( n.size > biggest_node_size ){
biggest_node_size = n.size;
}
}
});
g.nodes.forEach(function(n) {
if (n.id == 83820) {
if ( n.size < biggest_node_size ){
n.size = biggest_node_size;
}
}
});
//link to content
g.edges.push({
id: 158464,
size: 0.5,
source: 158464,
target: });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4176,
label: 'Ludovic Deriano',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2016/07/research.pasteur.fr_sans-titre-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/ludovic-deriano/',
x: x_site,
y: y_site,
size: 10,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 1584644176,
size: 0.5,
source: 158464,
target: 4176 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4246,
label: 'Sandrine Etienne-Manneville',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/06/research.pasteur.fr_sandrine_etienne-manneville-150x150.png',
page_url: 'https://research.pasteur.fr/fr/member/sandrine-etienne-manneville/',
x: x_site,
y: y_site,
size: 10,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 1584644246,
size: 0.5,
source: 158464,
target: 4246 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4962,
label: 'Jean-Pierre Vartanian',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/12/research.pasteur.fr_capture-d’écran-2015-11-23-à-15.18.00-150x150.png',
page_url: 'https://research.pasteur.fr/fr/member/jean-pierre-vartanian/',
x: x_site,
y: y_site,
size: 10,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 1584644962,
size: 0.5,
source: 158464,
target: 4962 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4483,
label: 'Han Li',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/06/research.pasteur.fr_han_li_small-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/han-li/',
x: x_site,
y: y_site,
size: 10,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 1584644483,
size: 0.5,
source: 158464,
target: 4483 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4138,
label: 'Marc Delarue',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_marc2-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/marc-delarue/',
x: x_site,
y: y_site,
size: 10,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 1584644138,
size: 0.5,
source: 158464,
target: 4138 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4355,
label: 'Ivo Gomperts Boneca',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/10/research.pasteur.fr_ipp6314-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/ivo-gomperts-boneca/',
x: x_site,
y: y_site,
size: 10,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 1584644355,
size: 0.5,
source: 158464,
target: 4355 });
// adding node
var x_node = Math.cos(2 * 2 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 2 * Math.PI / N) * 10;
g.nodes.push({
id: 121754,
label: 'TEAM: Dynamique cellulaire physiologique et pathologique',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/fr/team/physiological-and-pathological-cellular-dynamics/',
size: 24,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 83820121754,
size: 0.5,
source: 83820,
target: 121754 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == ) {
n.size = n.size + 10;
if ( n.size > biggest_node_size ){
biggest_node_size = n.size;
}
}
});
g.nodes.forEach(function(n) {
if (n.id == 83820) {
if ( n.size < biggest_node_size ){
n.size = biggest_node_size;
}
}
});
//link to content
g.edges.push({
id: 121754,
size: 0.5,
source: 121754,
target: });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4246) {
n.size = n.size + 10;
if ( n.size > biggest_node_size ){
biggest_node_size = n.size;
}
}
});
g.nodes.forEach(function(n) {
if (n.id == 83820) {
if ( n.size < biggest_node_size ){
n.size = biggest_node_size;
}
}
});
//link to content
g.edges.push({
id: 1217544246,
size: 0.5,
source: 121754,
target: 4246 });
// adding node
var x_node = Math.cos(2 * 3 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 3 * Math.PI / N) * 10;
g.nodes.push({
id: 95867,
label: 'EVENT: “Molecular mechanisms of mammalian autophagy” – Sharon Tooze –',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/fr/event/molecular-mechanisms-of-mammalian-autophagy-sharon-tooze-monday-october-30-2017-at-12-00-amphitheatre-duclaux/',
size: 24,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 8382095867,
size: 0.5,
source: 83820,
target: 95867 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 83816) {
n.size = n.size + 10;
if ( n.size > biggest_node_size ){
biggest_node_size = n.size;
}
}
});
g.nodes.forEach(function(n) {
if (n.id == 83820) {
if ( n.size < biggest_node_size ){
n.size = biggest_node_size;
}
}
});
//link to content
g.edges.push({
id: 9586783816,
size: 0.5,
source: 95867,
target: 83816 });
// adding node
var x_node = Math.cos(2 * 4 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 4 * Math.PI / N) * 10;
g.nodes.push({
id: 26,
label: 'DEPARTMENT: Neuroscience',
x: x_node,
y: y_node,
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2014/09/brain_artwork_cells_1920x1080_24208-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/department/neuroscience/',
size: 24,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 8382026,
size: 0.5,
source: 83820,
target: 26 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 134269,
label: 'Rebecca Pavillard',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2019/10/research_pasteur-pavillard-150x150.png',
page_url: 'https://research.pasteur.fr/fr/member/rebecca-pavillard/',
x: x_site,
y: y_site,
size: 10,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 26134269,
size: 0.5,
source: 26,
target: 134269 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 154625,
label: 'Assunta Pelosi',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2021/02/research_pasteur-assunta-pelosi-img-20190929-142019-3-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/assunta-pelosi/',
x: x_site,
y: y_site,
size: 10,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 26154625,
size: 0.5,
source: 26,
target: 154625 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 2489) {
n.size = n.size + 10;
if ( n.size > biggest_node_size ){
biggest_node_size = n.size;
}
}
});
g.nodes.forEach(function(n) {
if (n.id == 83820) {
if ( n.size < biggest_node_size ){
n.size = biggest_node_size;
}
}
});
//link to content
g.edges.push({
id: 262489,
size: 0.5,
source: 26,
target: 2489 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 3801) {
n.size = n.size + 10;
if ( n.size > biggest_node_size ){
biggest_node_size = n.size;
}
}
});
g.nodes.forEach(function(n) {
if (n.id == 83820) {
if ( n.size < biggest_node_size ){
n.size = biggest_node_size;
}
}
});
//link to content
g.edges.push({
id: 263801,
size: 0.5,
source: 26,
target: 3801 });
// adding node
var x_node = Math.cos(2 * 5 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 5 * Math.PI / N) * 10;
g.nodes.push({
id: 15,
label: 'DEPARTMENT: Biologie cellulaire et infection',
x: x_node,
y: y_node,
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2014/09/research_pasteur-encell-biology-amp-infectionfrbiologie-cellulaire-et-infection-bandeau-dpt-bci-institutpasteur-13357-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/department/cell-biology-infection/',
size: 24,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 8382015,
size: 0.5,
source: 83820,
target: 15 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 155052,
label: 'Guillaume Frasca',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2021/03/research_pasteur-guillaume-frasca-gf-e1614787961122-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/guillaume-frasca/',
x: x_site,
y: y_site,
size: 10,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 15155052,
size: 0.5,
source: 15,
target: 155052 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 107500,
label: 'Gessyca Geoffroy',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/fr/member/gessyca-geoffroy/',
x: x_site,
y: y_site,
size: 10,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 15107500,
size: 0.5,
source: 15,
target: 107500 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4470,
label: 'Marc Lecuit',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2017/05/research_pasteur-sans-titre-2-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/marc-lecuit/',
x: x_site,
y: y_site,
size: 10,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 154470,
size: 0.5,
source: 15,
target: 4470 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 51154,
label: 'Guillaume Dumenil',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/09/research.pasteur.fr_research.pasteur.fr_fig101-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/guillaume-dumenil/',
x: x_site,
y: y_site,
size: 10,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 1551154,
size: 0.5,
source: 15,
target: 51154 });
var s = new sigma({
//container: document.getElementById('graph-main'),
graph: g,
renderer: {
// IMPORTANT:
// This works only with the canvas renderer, so the
// renderer type set as "canvas" is necessary here.
container: document.getElementById('graph-main'),
type: 'canvas'
},
settings: {
minNodeSize: 12,
maxNodeSize: 30,
mouseWheelEnabled: false,
font: 'Montserrat',
labelThreshold:25,
borderSize:1,
defaultNodeBorderColor: '#333',
sideMargin:25,
}
});
// We first need to save the original colors of our
// nodes and edges, like this:
s.graph.nodes().forEach(function(n) {
n.originalColor = n.color;
//console.log(n.id);
//console.log(s.graph.nodes(n.id));
});
s.graph.edges().forEach(function(e) {
e.originalColor = e.color;
});
// When a node is clicked, we check for each node
// if it is a neighbor of the clicked one. If not,
// we set its color as grey, and else, it takes its
// original color.
// We do the same for the edges, and we only keep
// edges that have both extremities colored.
s.bind('clickNode', function(e) {
var nodeId = e.data.node.id,
toKeep = s.graph.neighbors(nodeId);
toKeep[nodeId] = e.data.node;
s.graph.nodes().forEach(function(n) {
if (toKeep[n.id])
n.color = '#35a9f5';
else
n.color = '#dddddd';
});
s.graph.edges().forEach(function(e) {
if (toKeep[e.source] && toKeep[e.target])
e.color = '#35a9f5';
else
e.color = '#dddddd';
});
// Since the data has been modified, we need to
// call the refresh method to make the colors
// update effective.
s.refresh();
});
// When the stage is clicked, we just color each
// node and edge with its original color.
s.bind('clickStage', function(e) {
s.graph.nodes().forEach(function(n) {
n.color = n.originalColor;
});
s.graph.edges().forEach(function(e) {
e.color = e.originalColor;
});
// Same as in the previous event:
s.refresh();
});
s.bind("doubleClickNode", function (e) {
$("#canvas-wrap, .sigma-scene, .sigma-mouse").val();
ajax_load_page( e.data.node.page_url );
});
var c = s.camera;
s.bind("rightClickStage", function (e) {
sigma.misc.animation.camera(c, {
ratio: c.ratio * c.settings('zoomingRatio')
}, {
duration: 200
});
});
// Configure the noverlap layout:
var noverlapListener = s.configNoverlap({
nodeMargin: 10,
scaleNodes: 0.3,
gridSize: 1,
easing: 'quadraticInOut', // animation transition function
duration: 4000 // animation duration. Long here for the purposes of this example only
});
// Bind the events:
noverlapListener.bind('start stop interpolate', function(e) {
//console.log(e.type);
if(e.type === 'start') {
//console.time('noverlap');
}
if(e.type === 'interpolate') {
//console.timeEnd('noverlap');
}
});
// Start the layout:
s.startNoverlap();
//s.refresh();
// Initialize the dragNodes plugin:
var dragListener = sigma.plugins.dragNodes(s, s.renderers[0]);
dragListener.bind('startdrag', function(event) {
});
dragListener.bind('drag', function(event) {
});
dragListener.bind('drop', function(event) {
});
dragListener.bind('dragend', function(event) {
});