GUIDE
- Left-click and drag the background to move the graph
- Left-click and drag the nodes to reorganize
- Left-click a node to view first level connections
- Double left-click a node to navigate to its page
- Double left-click the background to zoom in
- Right-click the background to zoom out
sigma.utils.pkg('sigma.canvas.nodes');
sigma.canvas.nodes.image = (function() {
var _cache = {},
_loading = {},
_callbacks = {};
// Return the renderer itself:
var renderer = function(node, context, settings) {
var args = arguments,
prefix = settings('prefix') || '',
size = node[prefix + 'size'],
color = node.color || settings('defaultNodeColor'),
url = node.url;
if (_cache[url]) {
context.save();
// Draw the clipping disc:
context.beginPath();
context.arc(
node[prefix + 'x'],
node[prefix + 'y'],
node[prefix + 'size'],
0,
Math.PI * 2,
true
);
context.closePath();
context.clip();
// Draw the image
context.drawImage(
_cache[url],
node[prefix + 'x'] - size,
node[prefix + 'y'] - size,
2 * size,
2 * size
);
// Quit the "clipping mode":
context.restore();
// Draw the border:
context.beginPath();
context.arc(
node[prefix + 'x'],
node[prefix + 'y'],
node[prefix + 'size'],
0,
Math.PI * 2,
true
);
context.lineWidth = 1;
context.strokeStyle = node.color || settings('defaultNodeColor');
context.stroke();
} else {
sigma.canvas.nodes.image.cache(url);
sigma.canvas.nodes.def.apply(
sigma.canvas.nodes,
args
);
}
};
// Let's add a public method to cache images, to make it possible to
// preload images before the initial rendering:
renderer.cache = function(url, callback) {
if (callback)
_callbacks[url] = callback;
if (_loading[url])
return;
var img = new Image();
img.onload = function() {
_loading[url] = false;
_cache[url] = img;
if (_callbacks[url]) {
_callbacks[url].call(this, img);
delete _callbacks[url];
}
};
_loading[url] = true;
img.src = url;
};
return renderer;
})();
var i,
s,
o,
offset_left = 0.5,
N = 1,
E = 40,
C = 5,
d = 0.5,
cs = [],
g = {
nodes: [],
edges: []
};
if (!sigma.classes.graph.hasMethod('neighbors')){
sigma.classes.graph.addMethod('neighbors', function(nodeId) {
var k,
neighbors = {},
index = this.allNeighborsIndex[nodeId] || {};
for (k in index)
neighbors[k] = this.nodesIndex[k];
return neighbors;
});
}
//adding the central node
g.nodes.push({
id: 6819,
label: 'Chantal Bizet',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_institutpasteur_33760-150x150.jpg',
x: 0,
y: 0,
size: 30,
color: '#DDDDDD'
});
var biggest_node_size = 0;
N=10
// adding node
var x_node = Math.cos(2 * 0 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 0 * Math.PI / N) * 10;
g.nodes.push({
id: 111545,
label: 'TEAM: Collection de l’Institut Pasteur (CIP)',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/fr/team/collection-of-the-institut-pasteur-cip/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 6819111545,
size: 0.5,
source: 6819,
target: 111545,
});
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 6984,
label: 'Gogoa Marthe Goly',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/09/research.pasteur.fr_marthe-goly-bis-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/gogoa-marthe-goly/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 1115456984,
size: 0.5,
source: 111545,
target: 6984 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 6986,
label: 'Estelle Mühle',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/09/research.pasteur.fr_20150904_152255-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/estelle-muhle/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 1115456986,
size: 0.5,
source: 111545,
target: 6986 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 88898,
label: 'Olivier Chesneau',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/fr/member/olivier-chesneau/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 11154588898,
size: 0.5,
source: 111545,
target: 88898 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 1633,
label: 'Christiane Bouchier',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/fr/member/christiane-bouchier/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 1115451633,
size: 0.5,
source: 111545,
target: 1633 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 146951,
label: 'Gérald Touak',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/fr/member/fr-gerald-touak/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 111545146951,
size: 0.5,
source: 111545,
target: 146951 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 185174,
label: 'Praveen Rahi',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/fr/member/praveen-rahi/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 111545185174,
size: 0.5,
source: 111545,
target: 185174 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 221365,
label: 'Margaux Schmitt',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/fr/member/margaux-schmitt/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 111545221365,
size: 0.5,
source: 111545,
target: 221365 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 6980,
label: 'Dominique Clermont',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/09/research.pasteur.fr_dominique-clermont-bis-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/dominique-clermont/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 1115456980,
size: 0.5,
source: 111545,
target: 6980 });
// adding node
var x_node = Math.cos(2 * 1 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 1 * Math.PI / N) * 10;
g.nodes.push({
id: 90093,
label: 'NEWS: Inability to send strains from June 1st to July 5th 2017 !!',
x: x_node,
y: y_node,
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/09/research.pasteur.fr_bacillus-cereus-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/news/inability-to-send-strains-from-june-1st-to-july-5th-2017/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 681990093,
size: 0.5,
source: 6819,
target: 90093,
});
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 6819) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 900936819,
size: 0.5,
source: 90093,
target: 6819 });
// adding node
var x_node = Math.cos(2 * 2 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 2 * Math.PI / N) * 10;
g.nodes.push({
id: 83391,
label: 'EVENT: 3rd International MIRRI Stakeholder Meeting',
x: x_node,
y: y_node,
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/09/research.pasteur.fr_mirri2-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/event/3rd-international-mirri-stakeholder-meeting/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 681983391,
size: 0.5,
source: 6819,
target: 83391,
});
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 6819) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 833916819,
size: 0.5,
source: 83391,
target: 6819 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 6817,
label: 'Raquel Hurtado Ortiz',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/05/research_pasteur-raquel-hurtado-ortiz-foto-perfil-rho-2-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/raquel-hurtado-ortiz/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 833916817,
size: 0.5,
source: 83391,
target: 6817 });
// adding node
var x_node = Math.cos(2 * 3 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 3 * Math.PI / N) * 10;
g.nodes.push({
id: 76523,
label: 'PROJECT: EMBRIC- European Marine Biological Research Infrastructure Cluster',
x: x_node,
y: y_node,
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2016/09/research.pasteur.fr_embric_logo_big_transparant-150x150.png',
page_url: 'https://research.pasteur.fr/fr/project/embric-european-marine-biological-research-infrastructure-cluster/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 681976523,
size: 0.5,
source: 6819,
target: 76523,
});
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 6817) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 765236817,
size: 0.5,
source: 76523,
target: 6817 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 6819) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 765236819,
size: 0.5,
source: 76523,
target: 6819 });
// adding node
var x_node = Math.cos(2 * 4 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 4 * Math.PI / N) * 10;
g.nodes.push({
id: 76519,
label: 'EVENT: EMBRIC – 1st General Assembly & EB – Naples meeting',
x: x_node,
y: y_node,
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2016/09/research.pasteur.fr_embric-ga-150x150.png',
page_url: 'https://research.pasteur.fr/fr/event/embric-1st-general-assembly-eb-naples-meeting/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 681976519,
size: 0.5,
source: 6819,
target: 76519,
});
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 6819) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 765196819,
size: 0.5,
source: 76519,
target: 6819 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 6817) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 765196817,
size: 0.5,
source: 76519,
target: 6817 });
// adding node
var x_node = Math.cos(2 * 5 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 5 * Math.PI / N) * 10;
g.nodes.push({
id: 76514,
label: 'NEWS: EMBRIC – 1st General Assembly & EB – Naples meeting',
x: x_node,
y: y_node,
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2016/09/research.pasteur.fr_embric-ga-1-150x150.png',
page_url: 'https://research.pasteur.fr/fr/news/embric-1st-general-assembly-eb-naples-meeting/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 681976514,
size: 0.5,
source: 6819,
target: 76514,
});
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 6819) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 765146819,
size: 0.5,
source: 76514,
target: 6819 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 6817) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 765146817,
size: 0.5,
source: 76514,
target: 6817 });
// adding node
var x_node = Math.cos(2 * 6 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 6 * Math.PI / N) * 10;
g.nodes.push({
id: 66765,
label: 'PROJECT: Phylogenomics of Shiga’s epidemic dysentery bacillus (Shigella dysenteriae type 1)',
x: x_node,
y: y_node,
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2016/03/research.pasteur.fr_fig1_nmicrobiol_edited18012016-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/project/phylogenomics-of-shigas-epidemic-dysentery-bacillus-shigella-dysenteriae-type-1/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 681966765,
size: 0.5,
source: 6819,
target: 66765,
});
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4713,
label: 'Elisabeth Njamkepo Nguemkam',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/11/research.pasteur.fr_photo-elisabeth-2-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/elisabeth-njamkepo-nguemkam/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 667654713,
size: 0.5,
source: 66765,
target: 4713 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4705,
label: '',
type: 'image',
url: '',
page_url: '',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 667654705,
size: 0.5,
source: 66765,
target: 4705 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4707,
label: '',
type: 'image',
url: '',
page_url: '',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 667654707,
size: 0.5,
source: 66765,
target: 4707 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4700,
label: '',
type: 'image',
url: '',
page_url: '',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 667654700,
size: 0.5,
source: 66765,
target: 4700 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 8524,
label: 'Monique Lejay-Collin',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/fr/member/monique-lejay-collin/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 667658524,
size: 0.5,
source: 66765,
target: 8524 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 8521,
label: 'Isabelle Carle',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/fr/member/isabelle-carle/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 667658521,
size: 0.5,
source: 66765,
target: 8521 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 8526,
label: 'Corinne Ruckly',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/fr/member/corinne-ruckly/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 667658526,
size: 0.5,
source: 66765,
target: 8526 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4699,
label: '',
type: 'image',
url: '',
page_url: '',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 667654699,
size: 0.5,
source: 66765,
target: 4699 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 8517,
label: 'Marie Accou-Demartin',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/fr/member/marie-accou-demartin/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 667658517,
size: 0.5,
source: 66765,
target: 8517 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 1633) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 667651633,
size: 0.5,
source: 66765,
target: 1633 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4780,
label: 'Philippe Sansonetti',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/06/research.pasteur.fr_philippe-sansonetti-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/philippe-sansonetti__trashed/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 667654780,
size: 0.5,
source: 66765,
target: 4780 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 6819) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 667656819,
size: 0.5,
source: 66765,
target: 6819 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 6980) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 667656980,
size: 0.5,
source: 66765,
target: 6980 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 11479,
label: 'Raymond Bercion',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/fr/riip_member/raymond-bercion/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 6676511479,
size: 0.5,
source: 66765,
target: 11479 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 11480,
label: 'Amy Gassama',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2016/06/278-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/riip_member/amy-gassama/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 6676511480,
size: 0.5,
source: 66765,
target: 11480 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4708,
label: 'Francois-Xavier Weill',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2018/09/research_pasteur-weill-francois-xavier-34recadre-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/francois-xavier-weill/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 667654708,
size: 0.5,
source: 66765,
target: 4708 });
// adding node
var x_node = Math.cos(2 * 7 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 7 * Math.PI / N) * 10;
g.nodes.push({
id: 47402,
label: 'PROJECT: BRC-LIMS',
x: x_node,
y: y_node,
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/09/research.pasteur.fr_logo_10-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/project/brc-lims/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 681947402,
size: 0.5,
source: 6819,
target: 47402,
});
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 6819) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 474026819,
size: 0.5,
source: 47402,
target: 6819 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 6827,
label: '',
type: 'image',
url: '',
page_url: '',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 474026827,
size: 0.5,
source: 47402,
target: 6827 });
// adding node
var x_node = Math.cos(2 * 8 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 8 * Math.PI / N) * 10;
g.nodes.push({
id: 37694,
label: 'PROJECT: Microbial Resource Research Infrastructure',
x: x_node,
y: y_node,
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/09/research.pasteur.fr_mirri2-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/project/microbial-resource-research-infrastructure/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 681937694,
size: 0.5,
source: 6819,
target: 37694,
});
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 6817) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 376946817,
size: 0.5,
source: 37694,
target: 6817 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 6819) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 376946819,
size: 0.5,
source: 37694,
target: 6819 });
// adding node
var x_node = Math.cos(2 * 9 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 9 * Math.PI / N) * 10;
g.nodes.push({
id: 141882,
label: 'PROJECT: ATPase inhibitors, the cases of human heat shock protein 90 and bacterial type IIA topoisomerases',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/fr/project/atpase-inhibitors-the-cases-of-human-heat-shock-protein-90-and-bacterial-type-iia-topoisomerases/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 6819141882,
size: 0.5,
source: 6819,
target: 141882,
});
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 3913,
label: 'Claudine Mayer',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_claudine_photo.001-001-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/claudine-mayer/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 1418823913,
size: 0.5,
source: 141882,
target: 3913 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 8419,
label: 'Stéphanie Petrella',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2019/02/research_pasteur-photo-sp-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/stephanie-petrella/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 1418828419,
size: 0.5,
source: 141882,
target: 8419 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4693,
label: 'Hélène Munier-Lehmann',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/09/research.pasteur.fr_photo-hml-recadre-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/helene-munier-lehmann/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 1418824693,
size: 0.5,
source: 141882,
target: 4693 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 6819) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 1418826819,
size: 0.5,
source: 141882,
target: 6819 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 7857,
label: 'Laurence Motreff',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2018/09/research_pasteur-lm-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/laurence-motreff/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 1418827857,
size: 0.5,
source: 141882,
target: 7857 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 7959,
label: 'Geneviève Janvier',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/fr/member/genevieve-janvier/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 1418827959,
size: 0.5,
source: 141882,
target: 7959 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 6980) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 1418826980,
size: 0.5,
source: 141882,
target: 6980 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 6818,
label: 'Evelyne Begaud',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/09/research.pasteur.fr_photo_eb_2_2013-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/evelyne-begaud/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 1418826818,
size: 0.5,
source: 141882,
target: 6818 });
var s = new sigma({
//container: document.getElementById('graph-main'),
graph: g,
renderer: {
// IMPORTANT:
// This works only with the canvas renderer, so the
// renderer type set as "canvas" is necessary here.
container: document.getElementById('graph-main'),
type: 'canvas'
},
settings: {
minNodeSize: 6,
maxNodeSize: 35,
mouseWheelEnabled: false,
font: 'Montserrat',
labelThreshold:25,
borderSize:1,
defaultNodeBorderColor: '#999',
sideMargin:25,
}
});
// We first need to save the original colors of our
// nodes and edges, like this:
s.graph.nodes().forEach(function(n) {
n.originalColor = n.color;
});
s.graph.edges().forEach(function(e) {
e.originalColor = e.color;
});
// When a node is clicked, we check for each node
// if it is a neighbor of the clicked one. If not,
// we set its color as grey, and else, it takes its
// original color.
// We do the same for the edges, and we only keep
// edges that have both extremities colored.
s.bind('clickNode', function(e) {
var nodeId = e.data.node.id,
toKeep = s.graph.neighbors(nodeId);
toKeep[nodeId] = e.data.node;
s.graph.nodes().forEach(function(n) {
if (toKeep[n.id])
n.color = '#35a9f5';
else
n.color = '#dddddd';
});
s.graph.edges().forEach(function(e) {
if (toKeep[e.source] && toKeep[e.target])
e.color = '#35a9f5';
else
e.color = '#dddddd';
});
// Since the data has been modified, we need to
// call the refresh method to make the colors
// update effective.
s.refresh();
});
// When the stage is clicked, we just color each
// node and edge with its original color.
s.bind('clickStage', function(e) {
s.graph.nodes().forEach(function(n) {
n.color = n.originalColor;
});
s.graph.edges().forEach(function(e) {
e.color = e.originalColor;
});
// Same as in the previous event:
s.refresh();
});
s.bind("doubleClickNode", function (e) {
$("#canvas-wrap, .sigma-scene, .sigma-mouse").val();
ajax_load_page( e.data.node.page_url );
});
var c = s.camera;
s.bind("rightClickStage", function (e) {
sigma.misc.animation.camera(c, {
ratio: c.ratio * c.settings('zoomingRatio')
}, {
duration: 200
});
});
// Configure the noverlap layout:
var noverlapListener = s.configNoverlap({
nodeMargin: 10,
scaleNodes: 0.3,
gridSize: 1,
easing: 'quadraticInOut', // animation transition function
duration: 4000 // animation duration. Long here for the purposes of this example only
});
// Bind the events:
noverlapListener.bind('start stop interpolate', function(e) {
//console.log(e.type);
if(e.type === 'start') {
//console.time('noverlap');
}
if(e.type === 'interpolate') {
//console.timeEnd('noverlap');
}
});
// Start the layout:
s.startNoverlap();
//s.refresh();
// Initialize the dragNodes plugin:
var dragListener = sigma.plugins.dragNodes(s, s.renderers[0]);
dragListener.bind('startdrag', function(event) {
});
dragListener.bind('drag', function(event) {
});
dragListener.bind('drop', function(event) {
});
dragListener.bind('dragend', function(event) {
});