GUIDE
- Left-click and drag the background to move the graph
- Left-click and drag the nodes to reorganize
- Left-click a node to view first level connections
- Double left-click a node to navigate to its page
- Double left-click the background to zoom in
- Right-click the background to zoom out
sigma.utils.pkg('sigma.canvas.nodes');
sigma.canvas.nodes.image = (function() {
var _cache = {},
_loading = {},
_callbacks = {};
// Return the renderer itself:
var renderer = function(node, context, settings) {
var args = arguments,
prefix = settings('prefix') || '',
size = node[prefix + 'size'],
color = node.color || settings('defaultNodeColor'),
url = node.url;
if (_cache[url]) {
context.save();
// Draw the clipping disc:
context.beginPath();
context.arc(
node[prefix + 'x'],
node[prefix + 'y'],
node[prefix + 'size'],
0,
Math.PI * 2,
true
);
context.closePath();
context.clip();
// Draw the image
context.drawImage(
_cache[url],
node[prefix + 'x'] - size,
node[prefix + 'y'] - size,
2 * size,
2 * size
);
// Quit the "clipping mode":
context.restore();
// Draw the border:
context.beginPath();
context.arc(
node[prefix + 'x'],
node[prefix + 'y'],
node[prefix + 'size'],
0,
Math.PI * 2,
true
);
context.lineWidth = 1;
context.strokeStyle = node.color || settings('defaultNodeColor');
context.stroke();
} else {
sigma.canvas.nodes.image.cache(url);
sigma.canvas.nodes.def.apply(
sigma.canvas.nodes,
args
);
}
};
// Let's add a public method to cache images, to make it possible to
// preload images before the initial rendering:
renderer.cache = function(url, callback) {
if (callback)
_callbacks[url] = callback;
if (_loading[url])
return;
var img = new Image();
img.onload = function() {
_loading[url] = false;
_cache[url] = img;
if (_callbacks[url]) {
_callbacks[url].call(this, img);
delete _callbacks[url];
}
};
_loading[url] = true;
img.src = url;
};
return renderer;
})();
var i,
s,
o,
offset_left = 0.5,
N = 1,
E = 40,
C = 5,
d = 0.5,
cs = [],
g = {
nodes: [],
edges: []
};
if (!sigma.classes.graph.hasMethod('neighbors')){
sigma.classes.graph.addMethod('neighbors', function(nodeId) {
var k,
neighbors = {},
index = this.allNeighborsIndex[nodeId] || {};
for (k in index)
neighbors[k] = this.nodesIndex[k];
return neighbors;
});
}
//adding the central node
g.nodes.push({
id: 4426,
label: 'Daniel Ladant',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/10/research.pasteur.fr_dl-150x150.jpg',
x: 0,
y: 0,
size: 30,
color: '#DDDDDD'
});
var biggest_node_size = 0;
N=18
// adding node
var x_node = Math.cos(2 * 0 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 0 * Math.PI / N) * 10;
g.nodes.push({
id: 219807,
label: 'NEWS: Des moteurs moléculaires produisent l’énergie nécessaire pour nourrir les bactéries',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/fr/news/des-moteurs-moleculaires-produisent-lenergie-necessaire-pour-nourrir-les-bacteries__trashed/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 4426219807,
size: 0.5,
source: 4426,
target: 219807,
});
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4138,
label: 'Marc Delarue',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_marc2-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/marc-delarue/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 2198074138,
size: 0.5,
source: 219807,
target: 4138 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4148,
label: 'Nadia Izadi-Pruneyre',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/08/research.pasteur.fr_photo_site-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/nadia-izadi-pruneyre/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 2198074148,
size: 0.5,
source: 219807,
target: 4148 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4426) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 2198074426,
size: 0.5,
source: 219807,
target: 4426 });
// adding node
var x_node = Math.cos(2 * 1 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 1 * Math.PI / N) * 10;
g.nodes.push({
id: 202303,
label: 'EVENT: The 29th Meeting on Toxinology is now being organized!',
x: x_node,
y: y_node,
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2023/05/research_pasteur-the-29th-meeting-on-toxinology-is-now-being-organized-rt29-image-230215-2-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/event/the-29th-meeting-on-toxinology-is-now-being-organized/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 4426202303,
size: 0.5,
source: 4426,
target: 202303,
});
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4428,
label: 'Alexandre Chenal',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/08/research.pasteur.fr_ed99e55a775a81d45a_l_843ae-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/alexandre-chenal/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 2023034428,
size: 0.5,
source: 202303,
target: 4428 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4426) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 2023034426,
size: 0.5,
source: 202303,
target: 4426 });
// adding node
var x_node = Math.cos(2 * 2 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 2 * Math.PI / N) * 10;
g.nodes.push({
id: 186604,
label: 'EVENT: 28th Meeting on Toxinology (RT28) – November 28th-29th, 2022',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/fr/event/28th-meeting-on-toxinology-rt28-november-28th-29th-2022/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 4426186604,
size: 0.5,
source: 4426,
target: 186604,
});
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4428) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 1866044428,
size: 0.5,
source: 186604,
target: 4428 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4426) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 1866044426,
size: 0.5,
source: 186604,
target: 4426 });
// adding node
var x_node = Math.cos(2 * 3 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 3 * Math.PI / N) * 10;
g.nodes.push({
id: 129774,
label: 'PROJECT: Detection and countermeasures against bacterial toxins',
x: x_node,
y: y_node,
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2019/09/research_pasteur-bitox-k-actin-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/project/neurotoxins-and-countermeasures/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 4426129774,
size: 0.5,
source: 4426,
target: 129774,
});
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 92462,
label: 'Emmanuel Lemichez',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2017/07/research_pasteur-lemichez-2-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/emmanuel-lemichez/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 12977492462,
size: 0.5,
source: 129774,
target: 92462 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 110109,
label: 'Christine Rasetti-Escargueil',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/fr/?post_type=member&p=110109',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 129774110109,
size: 0.5,
source: 129774,
target: 110109 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 129806,
label: 'Éléa Paillares',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2019/10/research_pasteur-20180711_150350-stand-copie-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/elea-paillares/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 129774129806,
size: 0.5,
source: 129774,
target: 129806 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 8386,
label: 'Melanie Dos Santos',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2019/07/research_pasteur-photo-identite-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/melanie-dos-santos/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 1297748386,
size: 0.5,
source: 129774,
target: 8386 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4101,
label: 'Marie-Anne Nahori',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_nahori-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/marie-anne-nahori/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 1297744101,
size: 0.5,
source: 129774,
target: 4101 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4426) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 1297744426,
size: 0.5,
source: 129774,
target: 4426 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4926,
label: 'Caroline Demeret',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/09/research.pasteur.fr_dscn7482-copie-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/caroline-demeret/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 1297744926,
size: 0.5,
source: 129774,
target: 4926 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4237,
label: 'Jost Enninga',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2016/06/research.pasteur.fr_jost2015-3-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/jost-enninga/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 1297744237,
size: 0.5,
source: 129774,
target: 4237 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4704,
label: 'Michel-Robert Popoff',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/fr/?post_type=member&p=4704',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 1297744704,
size: 0.5,
source: 129774,
target: 4704 });
// adding node
var x_node = Math.cos(2 * 4 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 4 * Math.PI / N) * 10;
g.nodes.push({
id: 121952,
label: 'TEAM: Biologie Moléculaire Structurale et Processus Infectieux',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/fr/team/structural-molecular-biology-and-infectious-process/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 4426121952,
size: 0.5,
source: 4426,
target: 121952,
});
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4138) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 1219524138,
size: 0.5,
source: 121952,
target: 4138 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4426) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 1219524426,
size: 0.5,
source: 121952,
target: 4426 });
// adding node
var x_node = Math.cos(2 * 5 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 5 * Math.PI / N) * 10;
g.nodes.push({
id: 116507,
label: 'EVENT: 25th Meeting (RT25) of the French Society of Toxinology (SFET) : “Toxins and Health: from Molecules to Organisms”.',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/fr/event/25th-meeting-rt25-of-the-french-society-of-toxinology-sfet-toxins-and-health-from-molecules-to-organisms/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 4426116507,
size: 0.5,
source: 4426,
target: 116507,
});
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4076,
label: 'Grazyna Faure-Kuzminska',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2016/06/research.pasteur.fr_gf-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/grazyna-faure-kuzminska/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 1165074076,
size: 0.5,
source: 116507,
target: 4076 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4704) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 1165074704,
size: 0.5,
source: 116507,
target: 4704 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4426) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 1165074426,
size: 0.5,
source: 116507,
target: 4426 });
// adding node
var x_node = Math.cos(2 * 6 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 6 * Math.PI / N) * 10;
g.nodes.push({
id: 113086,
label: 'EVENT: Host cell chaperones during toxin translocation in cells',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/fr/event/host-cell-chaperones-during-toxin-translocation-in-cells/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 4426113086,
size: 0.5,
source: 4426,
target: 113086,
});
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4426) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 1130864426,
size: 0.5,
source: 113086,
target: 4426 });
// adding node
var x_node = Math.cos(2 * 7 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 7 * Math.PI / N) * 10;
g.nodes.push({
id: 113065,
label: 'EVENT: Streptococcus pneumoniae: Development of protein-based vaccines and characterization of immune responses in animal models with high susceptibility to infection',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/fr/event/streptococcus-pneumoniae-development-of-protein-based-vaccines-and-characterization-of-immune-responses-in-animal-models-with-high-susceptibility-to-infection/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 4426113065,
size: 0.5,
source: 4426,
target: 113065,
});
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4426) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 1130654426,
size: 0.5,
source: 113065,
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// adding node
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url: '',
page_url: '',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 2099582262,
size: 0.5,
source: 20995,
target: 82262 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 65677,
label: '',
type: 'image',
url: '',
page_url: '',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 2099565677,
size: 0.5,
source: 20995,
target: 65677 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 8201) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 209958201,
size: 0.5,
source: 20995,
target: 8201 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4426) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 209954426,
size: 0.5,
source: 20995,
target: 4426 });
// adding node
var x_node = Math.cos(2 * 14 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 14 * Math.PI / N) * 10;
g.nodes.push({
id: 20988,
label: 'PROJECT: In vivo analysis of protein-protein interactions',
x: x_node,
y: y_node,
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_figure_4-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/project/in-vivo-analysis-of-protein-protein-interactions/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 442620988,
size: 0.5,
source: 4426,
target: 20988,
});
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4426) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 209884426,
size: 0.5,
source: 20988,
target: 4426 });
// adding node
var x_node = Math.cos(2 * 15 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 15 * Math.PI / N) * 10;
g.nodes.push({
id: 20981,
label: 'PROJECT: Recombinant CyaA toxin as an innovative vaccine vehicle',
x: x_node,
y: y_node,
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_figure_3-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/project/recombinant-cyaa-toxin-as-an-innovative-vaccine-vehicle/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 442620981,
size: 0.5,
source: 4426,
target: 20981,
});
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4426) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 209814426,
size: 0.5,
source: 20981,
target: 4426 });
// adding node
var x_node = Math.cos(2 * 16 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 16 * Math.PI / N) * 10;
g.nodes.push({
id: 20103,
label: 'PROJECT: Structure-function studies of the CyaA toxin',
x: x_node,
y: y_node,
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_figura8-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/project/biochemistry-of-macromolecular-interactions__trashed/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 442620103,
size: 0.5,
source: 4426,
target: 20103,
});
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4426) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 201034426,
size: 0.5,
source: 20103,
target: 4426 });
// adding node
var x_node = Math.cos(2 * 17 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 17 * Math.PI / N) * 10;
g.nodes.push({
id: 6149,
label: 'TEAM: Biochimie des Interactions Macromoléculaires',
x: x_node,
y: y_node,
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_institutpasteur_i05999-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/team/biochemistry-of-macromolecular-interactions/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 44266149,
size: 0.5,
source: 4426,
target: 6149,
});
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4428) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 61494428,
size: 0.5,
source: 6149,
target: 4428 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4297,
label: 'Olivera Francetic',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/09/research.pasteur.fr_o-francetic-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/olivera-francetic/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 61494297,
size: 0.5,
source: 6149,
target: 4297 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4430) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 61494430,
size: 0.5,
source: 6149,
target: 4430 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 8203) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 61498203,
size: 0.5,
source: 6149,
target: 8203 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 8201) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 61498201,
size: 0.5,
source: 6149,
target: 8201 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 137287,
label: 'Corentin Leger',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2020/01/research_pasteur-photo-id-corentin-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/corentin-leger/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 6149137287,
size: 0.5,
source: 6149,
target: 137287 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 153294,
label: 'Vincent Deruelle',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2021/01/research_pasteur-envincent-deruellefrvincent-deruelle-vincent-deruelle-e1611596631197-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/fr-vincent-deruelle/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 6149153294,
size: 0.5,
source: 6149,
target: 153294 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 155711,
label: 'Nicolas Carvalho',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2021/03/research_pasteur-nicolas-carvalho-170412654-294819972275370-4517567528851248666-n-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/nicolas-carvalho/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 6149155711,
size: 0.5,
source: 6149,
target: 155711 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 189689,
label: 'Jose Roberto Ponce Lopez',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2022/10/research_pasteur-jose-roberto-ponce-lopez-rober1-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/jose-roberto-ponce-lopez/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 6149189689,
size: 0.5,
source: 6149,
target: 189689 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 190621,
label: 'Gaia Scilironi',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2022/11/research_pasteur-gaia-scilironi-image-6483441-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/gaia-scilironi/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 6149190621,
size: 0.5,
source: 6149,
target: 190621 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 208147,
label: 'Jacinthe Frangieh',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2023/09/research_pasteur-enjacinthe-frangiehfrjacinthe-frangieh-img-4072-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/jacinthe-frangieh/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 6149208147,
size: 0.5,
source: 6149,
target: 208147 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 210118,
label: 'Iqra Younus',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/fr/member/iqra-younus/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 6149210118,
size: 0.5,
source: 6149,
target: 210118 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 218830,
label: 'Sylvie Ouellette',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/fr/member/sylvie-ouellette/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 6149218830,
size: 0.5,
source: 6149,
target: 218830 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 198182,
label: 'Gabrielle Dupuis',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2023/03/research_pasteur-gabrielle-dupuis-b7d39f80-0d52-40a3-ab74-27a21830df6a-150x150.jpeg',
page_url: 'https://research.pasteur.fr/fr/member/gabrielle-dupuis/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 6149198182,
size: 0.5,
source: 6149,
target: 198182 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 221698,
label: 'Eira Donaji Aguirre Partida',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2024/03/research_pasteur-eneira-donaji-aguirre-partidafreira-donaji-aguirre-partida-img-7292-e1711582016732-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/eira-donaji-aguirre-partida/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 6149221698,
size: 0.5,
source: 6149,
target: 221698 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 231721,
label: 'Maria Camila Klaiss Luna',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2024/10/research_pasteur-enmaria-camila-klaiss-lunafrmaria-camila-klaiss-luna-photomck-e1728306562175-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/maria-camila-klaiss-luna/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 6149231721,
size: 0.5,
source: 6149,
target: 231721 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 6842) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 61496842,
size: 0.5,
source: 6149,
target: 6842 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4426) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 61494426,
size: 0.5,
source: 6149,
target: 4426 });
var s = new sigma({
//container: document.getElementById('graph-main'),
graph: g,
renderer: {
// IMPORTANT:
// This works only with the canvas renderer, so the
// renderer type set as "canvas" is necessary here.
container: document.getElementById('graph-main'),
type: 'canvas'
},
settings: {
minNodeSize: 6,
maxNodeSize: 35,
mouseWheelEnabled: false,
font: 'Montserrat',
labelThreshold:25,
borderSize:1,
defaultNodeBorderColor: '#999',
sideMargin:25,
}
});
// We first need to save the original colors of our
// nodes and edges, like this:
s.graph.nodes().forEach(function(n) {
n.originalColor = n.color;
});
s.graph.edges().forEach(function(e) {
e.originalColor = e.color;
});
// When a node is clicked, we check for each node
// if it is a neighbor of the clicked one. If not,
// we set its color as grey, and else, it takes its
// original color.
// We do the same for the edges, and we only keep
// edges that have both extremities colored.
s.bind('clickNode', function(e) {
var nodeId = e.data.node.id,
toKeep = s.graph.neighbors(nodeId);
toKeep[nodeId] = e.data.node;
s.graph.nodes().forEach(function(n) {
if (toKeep[n.id])
n.color = '#35a9f5';
else
n.color = '#dddddd';
});
s.graph.edges().forEach(function(e) {
if (toKeep[e.source] && toKeep[e.target])
e.color = '#35a9f5';
else
e.color = '#dddddd';
});
// Since the data has been modified, we need to
// call the refresh method to make the colors
// update effective.
s.refresh();
});
// When the stage is clicked, we just color each
// node and edge with its original color.
s.bind('clickStage', function(e) {
s.graph.nodes().forEach(function(n) {
n.color = n.originalColor;
});
s.graph.edges().forEach(function(e) {
e.color = e.originalColor;
});
// Same as in the previous event:
s.refresh();
});
s.bind("doubleClickNode", function (e) {
$("#canvas-wrap, .sigma-scene, .sigma-mouse").val();
ajax_load_page( e.data.node.page_url );
});
var c = s.camera;
s.bind("rightClickStage", function (e) {
sigma.misc.animation.camera(c, {
ratio: c.ratio * c.settings('zoomingRatio')
}, {
duration: 200
});
});
// Configure the noverlap layout:
var noverlapListener = s.configNoverlap({
nodeMargin: 10,
scaleNodes: 0.3,
gridSize: 1,
easing: 'quadraticInOut', // animation transition function
duration: 4000 // animation duration. Long here for the purposes of this example only
});
// Bind the events:
noverlapListener.bind('start stop interpolate', function(e) {
//console.log(e.type);
if(e.type === 'start') {
//console.time('noverlap');
}
if(e.type === 'interpolate') {
//console.timeEnd('noverlap');
}
});
// Start the layout:
s.startNoverlap();
//s.refresh();
// Initialize the dragNodes plugin:
var dragListener = sigma.plugins.dragNodes(s, s.renderers[0]);
dragListener.bind('startdrag', function(event) {
});
dragListener.bind('drag', function(event) {
});
dragListener.bind('drop', function(event) {
});
dragListener.bind('dragend', function(event) {
});