GUIDE
- Left-click and drag the background to move the graph
- Left-click and drag the nodes to reorganize
- Left-click a node to view first level connections
- Double left-click a node to navigate to its page
- Double left-click the background to zoom in
- Right-click the background to zoom out
sigma.utils.pkg('sigma.canvas.nodes');
sigma.canvas.nodes.image = (function() {
var _cache = {},
_loading = {},
_callbacks = {};
// Return the renderer itself:
var renderer = function(node, context, settings) {
var args = arguments,
prefix = settings('prefix') || '',
size = node[prefix + 'size'],
color = node.color || settings('defaultNodeColor'),
url = node.url;
if (_cache[url]) {
context.save();
// Draw the clipping disc:
context.beginPath();
context.arc(
node[prefix + 'x'],
node[prefix + 'y'],
node[prefix + 'size'],
0,
Math.PI * 2,
true
);
context.closePath();
context.clip();
// Draw the image
context.drawImage(
_cache[url],
node[prefix + 'x'] - size,
node[prefix + 'y'] - size,
2 * size,
2 * size
);
// Quit the "clipping mode":
context.restore();
// Draw the border:
context.beginPath();
context.arc(
node[prefix + 'x'],
node[prefix + 'y'],
node[prefix + 'size'],
0,
Math.PI * 2,
true
);
context.lineWidth = 1;
context.strokeStyle = node.color || settings('defaultNodeColor');
context.stroke();
} else {
sigma.canvas.nodes.image.cache(url);
sigma.canvas.nodes.def.apply(
sigma.canvas.nodes,
args
);
}
};
// Let's add a public method to cache images, to make it possible to
// preload images before the initial rendering:
renderer.cache = function(url, callback) {
if (callback)
_callbacks[url] = callback;
if (_loading[url])
return;
var img = new Image();
img.onload = function() {
_loading[url] = false;
_cache[url] = img;
if (_callbacks[url]) {
_callbacks[url].call(this, img);
delete _callbacks[url];
}
};
_loading[url] = true;
img.src = url;
};
return renderer;
})();
var i,
s,
o,
offset_left = 0.5,
N = 1,
E = 40,
C = 5,
d = 0.5,
cs = [],
g = {
nodes: [],
edges: []
};
if (!sigma.classes.graph.hasMethod('neighbors')){
sigma.classes.graph.addMethod('neighbors', function(nodeId) {
var k,
neighbors = {},
index = this.allNeighborsIndex[nodeId] || {};
for (k in index)
neighbors[k] = this.nodesIndex[k];
return neighbors;
});
}
//adding the central node
g.nodes.push({
id: 4125,
label: 'Anne Dejean',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2016/03/research.pasteur.fr_anne-dejean-4-150x150.png',
x: 0,
y: 0,
size: 30,
color: '#DDDDDD'
});
var biggest_node_size = 0;
N=8
// adding node
var x_node = Math.cos(2 * 0 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 0 * Math.PI / N) * 10;
g.nodes.push({
id: 202473,
label: 'NEWS: New publication – Transient suppression of SUMOylation in embryonic stem cells generates embryo like structures',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/fr/news/new-publication-transient-suppression-of-sumoylation-in-embryonic-stem-cells-generates-embryo-like-structures/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 4125202473,
size: 0.5,
source: 4125,
target: 202473,
});
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4129,
label: 'Jack Christophe Cossec',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/09/research.pasteur.fr_photowebsite2-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/jack-christophe-cossec/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 2024734129,
size: 0.5,
source: 202473,
target: 4129 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 104407,
label: 'Tatiana Traboulsi',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2019/07/research_pasteur-tatiana-profile-pic-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/tatiana-traboulsi/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 202473104407,
size: 0.5,
source: 202473,
target: 104407 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 100201,
label: 'Sebastien Sart',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/fr/member/sebastien-sart/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 202473100201,
size: 0.5,
source: 202473,
target: 100201 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 65751,
label: 'Yann Loe-Mie',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2016/08/research.pasteur.fr_img_0998-1-150x150.jpeg',
page_url: 'https://research.pasteur.fr/fr/member/yann-loe-mi/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 20247365751,
size: 0.5,
source: 202473,
target: 65751 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 8564,
label: 'Ilan Theurillat',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/fr/?post_type=member&p=8564',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 2024738564,
size: 0.5,
source: 202473,
target: 8564 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 100027,
label: 'Charles Baroud',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2017/12/research_pasteur-dsc0120-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/charles-baroud/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 202473100027,
size: 0.5,
source: 202473,
target: 100027 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4125) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 2024734125,
size: 0.5,
source: 202473,
target: 4125 });
// adding node
var x_node = Math.cos(2 * 1 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 1 * Math.PI / N) * 10;
g.nodes.push({
id: 201864,
label: 'EVENT: Pasteur International Cancer Conference 2023',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/fr/event/pasteur-international-cancer-conference-2023/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 4125201864,
size: 0.5,
source: 4125,
target: 201864,
});
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 142960,
label: 'Sylvie Gratepanche',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/fr/member/fr-sylvie-gratepanche/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 201864142960,
size: 0.5,
source: 201864,
target: 142960 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4176,
label: 'Ludovic Deriano',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2016/07/research.pasteur.fr_sans-titre-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/ludovic-deriano/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 2018644176,
size: 0.5,
source: 201864,
target: 4176 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4246,
label: 'Sandrine Etienne-Manneville',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/06/research.pasteur.fr_sandrine_etienne-manneville-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/sandrine-etienne-manneville/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 2018644246,
size: 0.5,
source: 201864,
target: 4246 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 3982,
label: 'Philippe Bousso',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/09/research.pasteur.fr_photopb-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/philippe-bousso/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 2018643982,
size: 0.5,
source: 201864,
target: 3982 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4125) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 2018644125,
size: 0.5,
source: 201864,
target: 4125 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 78773,
label: 'Romain Levayer',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2016/11/research.pasteur.fr_dsc_0008-001-1-1-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/romain-levayer/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 20186478773,
size: 0.5,
source: 201864,
target: 78773 });
// adding node
var x_node = Math.cos(2 * 2 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 2 * Math.PI / N) * 10;
g.nodes.push({
id: 168495,
label: 'PROJECT: Integrating the activities of SUMO in gene expression, inflammation and cancer (ERC-2011-AdG SUMOSTRESS)',
x: x_node,
y: y_node,
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2021/10/research_pasteur-integrating-the-activities-of-sumo-in-gene-expression-inflammation-and-cancer-erc-2011-adg-sumostress-logo-erc-150x150.png',
page_url: 'https://research.pasteur.fr/fr/project/integrating-the-activities-of-sumo-in-gene-expression-inflammation-and-cancer-erc-2011-adg-sumostress/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 4125168495,
size: 0.5,
source: 4125,
target: 168495,
});
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4129) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 1684954129,
size: 0.5,
source: 168495,
target: 4129 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4135,
label: 'Jacob Seeler',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/09/research.pasteur.fr_jjjjjjjjjjaaaaacccooo-copie-copie-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/jacob-seeler/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 1684954135,
size: 0.5,
source: 168495,
target: 4135 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 8562,
label: 'Alexandra Andrieux',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_3d5b8ca-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/alexandra-andrieux/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 1684958562,
size: 0.5,
source: 168495,
target: 8562 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 155810,
label: 'Shireen Shajahan',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2021/03/research_pasteur-shireen-shajahan-photo-shireen-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/shireen-shajahan/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 168495155810,
size: 0.5,
source: 168495,
target: 155810 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 155816,
label: 'Amandine Goffeney',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2021/03/research_pasteur-amandine-goffeney-photo-web-amandine-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/amandine-goffeney/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 168495155816,
size: 0.5,
source: 168495,
target: 155816 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 65751) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 16849565751,
size: 0.5,
source: 168495,
target: 65751 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4125) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 1684954125,
size: 0.5,
source: 168495,
target: 4125 });
// adding node
var x_node = Math.cos(2 * 3 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 3 * Math.PI / N) * 10;
g.nodes.push({
id: 168489,
label: 'PROJECT: Chromatin role of SUMO in oncogenesis',
x: x_node,
y: y_node,
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2021/10/research_pasteur-chromatin-role-of-sumo-in-oncogenesis-label-equipe-labellisee-200x200-1-150x150.png',
page_url: 'https://research.pasteur.fr/fr/project/chromatin-role-of-sumo-in-oncogenesis/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 4125168489,
size: 0.5,
source: 4125,
target: 168489,
});
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4133,
label: 'Pascal Pineau',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_ef317547742df3f889_l_1e91c-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/pascal-pineau/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 1684894133,
size: 0.5,
source: 168489,
target: 4133 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4137,
label: 'Agnès Marchio',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_sans-titre2-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/agnes-marchio/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 1684894137,
size: 0.5,
source: 168489,
target: 4137 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4129) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 1684894129,
size: 0.5,
source: 168489,
target: 4129 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 161136,
label: 'Jorge Mata Garrido',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2021/06/research_pasteur-jorge-mata-garrido-jorge-pics-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/jorge-mata-garrido/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 168489161136,
size: 0.5,
source: 168489,
target: 161136 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4135) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 1684894135,
size: 0.5,
source: 168489,
target: 4135 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 8562) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 1684898562,
size: 0.5,
source: 168489,
target: 8562 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4125) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 1684894125,
size: 0.5,
source: 168489,
target: 4125 });
// adding node
var x_node = Math.cos(2 * 4 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 4 * Math.PI / N) * 10;
g.nodes.push({
id: 10242,
label: 'PROJECT: Deconstructing the role of SUMO on chromatin in cell identity and tissue repair (ERC-2018-AdG SUMiDENTITY)',
x: x_node,
y: y_node,
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/09/research.pasteur.fr_erc-1-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/project/deconstructing-the-role-of-sumo-on-chromatin-in-cell-identity-and-tissue-repair/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 412510242,
size: 0.5,
source: 4125,
target: 10242,
});
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4125) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 102424125,
size: 0.5,
source: 10242,
target: 4125 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4135) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 102424135,
size: 0.5,
source: 10242,
target: 4135 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 8562) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 102428562,
size: 0.5,
source: 10242,
target: 8562 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4129) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 102424129,
size: 0.5,
source: 10242,
target: 4129 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 8564) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 102428564,
size: 0.5,
source: 10242,
target: 8564 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 104407) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 10242104407,
size: 0.5,
source: 10242,
target: 104407 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 86565,
label: 'Luis Ignacio López Ferreira',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/fr/?post_type=member&p=86565',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 1024286565,
size: 0.5,
source: 10242,
target: 86565 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 85151,
label: 'Victoria Morel',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2017/03/research.pasteur.fr_img_20170317_113237143-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/victoria-morel/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 1024285151,
size: 0.5,
source: 10242,
target: 85151 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4127,
label: 'Ying Cao',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/08/research.pasteur.fr_me-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/ying-cao/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 102424127,
size: 0.5,
source: 10242,
target: 4127 });
// adding node
var x_node = Math.cos(2 * 5 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 5 * Math.PI / N) * 10;
g.nodes.push({
id: 86997,
label: 'EVENT: « Cancer cell of origin and tumor heterogeneity »',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/fr/event/cancer-cell-of-origin-and-tumor-heterogeneity/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 412586997,
size: 0.5,
source: 4125,
target: 86997,
});
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4125) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 869974125,
size: 0.5,
source: 86997,
target: 4125 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4876,
label: 'Shahragim Tajbakhsh',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/05/research_pasteur-shahragim-tajbakhsh-tajbakhsh-photo2024-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/shahragim-tajbakhsh/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 869974876,
size: 0.5,
source: 86997,
target: 4876 });
// adding node
var x_node = Math.cos(2 * 6 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 6 * Math.PI / N) * 10;
g.nodes.push({
id: 61189,
label: 'PROJECT: Molecular Epidemiology of Hepatocellular carcinoma',
x: x_node,
y: y_node,
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/12/research.pasteur.fr_illustration_pp-150x133.png',
page_url: 'https://research.pasteur.fr/fr/project/molecular-epidemiology-of-hepatocellular-carcinoma/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 412561189,
size: 0.5,
source: 4125,
target: 61189,
});
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4133) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 611894133,
size: 0.5,
source: 61189,
target: 4133 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4137) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 611894137,
size: 0.5,
source: 61189,
target: 4137 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 8563,
label: 'Juan Pablo Cerapio Arroyo',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2016/03/research.pasteur.fr_juan-pablo-cerapio-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/juan-pablo-cerapio-arroyo/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 611898563,
size: 0.5,
source: 61189,
target: 8563 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4125) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 611894125,
size: 0.5,
source: 61189,
target: 4125 });
// adding node
var x_node = Math.cos(2 * 7 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 7 * Math.PI / N) * 10;
g.nodes.push({
id: 6137,
label: 'TEAM: Organisation nucléaire et oncogénèse',
x: x_node,
y: y_node,
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2018/03/research_pasteur-photo-unite-anne-dejean-2018-150x150.png',
page_url: 'https://research.pasteur.fr/fr/team/nuclear-organization-and-oncogenesis/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 41256137,
size: 0.5,
source: 4125,
target: 6137,
});
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4133) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 61374133,
size: 0.5,
source: 6137,
target: 4133 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4135) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 61374135,
size: 0.5,
source: 6137,
target: 4135 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4129) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 61374129,
size: 0.5,
source: 6137,
target: 4129 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4137) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 61374137,
size: 0.5,
source: 6137,
target: 4137 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 8562) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 61378562,
size: 0.5,
source: 6137,
target: 8562 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 104398,
label: 'Samia Cheriet',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2018/03/research_pasteur-samia-cheriet-img-20210807-224154-251-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/samia-cheriet/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 6137104398,
size: 0.5,
source: 6137,
target: 104398 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 104407) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 6137104407,
size: 0.5,
source: 6137,
target: 104407 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 65751) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 613765751,
size: 0.5,
source: 6137,
target: 65751 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 155810) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 6137155810,
size: 0.5,
source: 6137,
target: 155810 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 155816) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 6137155816,
size: 0.5,
source: 6137,
target: 155816 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 161136) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 6137161136,
size: 0.5,
source: 6137,
target: 161136 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 7796,
label: 'Alice Nordlinger',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/05/research_pasteur-alice-nordlinger-photo-alice-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/alice-nordlinger/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 61377796,
size: 0.5,
source: 6137,
target: 7796 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 218720,
label: 'Claudia Monge',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2024/01/research_pasteur-enclaudia-monge-frclaudia-monge-1706099870067-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/claudia-monge/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 6137218720,
size: 0.5,
source: 6137,
target: 218720 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 218728,
label: 'Laure Asselin',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2024/01/research_pasteur-enlaure-asselin-frlaure-asselin-photo-laure-e1706099299461-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/laure-asselin/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 6137218728,
size: 0.5,
source: 6137,
target: 218728 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 218733,
label: 'Marion Salmon-Legagneur',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2024/01/research_pasteur-enmarion-salmon-legagneurfrmarion-salmon-legagneur-photo-marion-e1706108854182-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/marion-salmon-legagneur/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 6137218733,
size: 0.5,
source: 6137,
target: 218733 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4125) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 61374125,
size: 0.5,
source: 6137,
target: 4125 });
var s = new sigma({
//container: document.getElementById('graph-main'),
graph: g,
renderer: {
// IMPORTANT:
// This works only with the canvas renderer, so the
// renderer type set as "canvas" is necessary here.
container: document.getElementById('graph-main'),
type: 'canvas'
},
settings: {
minNodeSize: 6,
maxNodeSize: 35,
mouseWheelEnabled: false,
font: 'Montserrat',
labelThreshold:25,
borderSize:1,
defaultNodeBorderColor: '#999',
sideMargin:25,
}
});
// We first need to save the original colors of our
// nodes and edges, like this:
s.graph.nodes().forEach(function(n) {
n.originalColor = n.color;
});
s.graph.edges().forEach(function(e) {
e.originalColor = e.color;
});
// When a node is clicked, we check for each node
// if it is a neighbor of the clicked one. If not,
// we set its color as grey, and else, it takes its
// original color.
// We do the same for the edges, and we only keep
// edges that have both extremities colored.
s.bind('clickNode', function(e) {
var nodeId = e.data.node.id,
toKeep = s.graph.neighbors(nodeId);
toKeep[nodeId] = e.data.node;
s.graph.nodes().forEach(function(n) {
if (toKeep[n.id])
n.color = '#35a9f5';
else
n.color = '#dddddd';
});
s.graph.edges().forEach(function(e) {
if (toKeep[e.source] && toKeep[e.target])
e.color = '#35a9f5';
else
e.color = '#dddddd';
});
// Since the data has been modified, we need to
// call the refresh method to make the colors
// update effective.
s.refresh();
});
// When the stage is clicked, we just color each
// node and edge with its original color.
s.bind('clickStage', function(e) {
s.graph.nodes().forEach(function(n) {
n.color = n.originalColor;
});
s.graph.edges().forEach(function(e) {
e.color = e.originalColor;
});
// Same as in the previous event:
s.refresh();
});
s.bind("doubleClickNode", function (e) {
$("#canvas-wrap, .sigma-scene, .sigma-mouse").val();
ajax_load_page( e.data.node.page_url );
});
var c = s.camera;
s.bind("rightClickStage", function (e) {
sigma.misc.animation.camera(c, {
ratio: c.ratio * c.settings('zoomingRatio')
}, {
duration: 200
});
});
// Configure the noverlap layout:
var noverlapListener = s.configNoverlap({
nodeMargin: 10,
scaleNodes: 0.3,
gridSize: 1,
easing: 'quadraticInOut', // animation transition function
duration: 4000 // animation duration. Long here for the purposes of this example only
});
// Bind the events:
noverlapListener.bind('start stop interpolate', function(e) {
//console.log(e.type);
if(e.type === 'start') {
//console.time('noverlap');
}
if(e.type === 'interpolate') {
//console.timeEnd('noverlap');
}
});
// Start the layout:
s.startNoverlap();
//s.refresh();
// Initialize the dragNodes plugin:
var dragListener = sigma.plugins.dragNodes(s, s.renderers[0]);
dragListener.bind('startdrag', function(event) {
});
dragListener.bind('drag', function(event) {
});
dragListener.bind('drop', function(event) {
});
dragListener.bind('dragend', function(event) {
});