GUIDE
- Left-click and drag the background to move the graph
- Left-click and drag the nodes to reorganize
- Left-click a node to view first level connections
- Double left-click a node to navigate to its page
- Double left-click the background to zoom in
- Right-click the background to zoom out
sigma.utils.pkg('sigma.canvas.nodes');
sigma.canvas.nodes.image = (function() {
var _cache = {},
_loading = {},
_callbacks = {};
// Return the renderer itself:
var renderer = function(node, context, settings) {
var args = arguments,
prefix = settings('prefix') || '',
size = node[prefix + 'size'],
color = node.color || settings('defaultNodeColor'),
url = node.url;
if (_cache[url]) {
context.save();
// Draw the clipping disc:
context.beginPath();
context.arc(
node[prefix + 'x'],
node[prefix + 'y'],
node[prefix + 'size'],
0,
Math.PI * 2,
true
);
context.closePath();
context.clip();
// Draw the image
context.drawImage(
_cache[url],
node[prefix + 'x'] - size,
node[prefix + 'y'] - size,
2 * size,
2 * size
);
// Quit the "clipping mode":
context.restore();
// Draw the border:
context.beginPath();
context.arc(
node[prefix + 'x'],
node[prefix + 'y'],
node[prefix + 'size'],
0,
Math.PI * 2,
true
);
context.lineWidth = 1;
context.strokeStyle = node.color || settings('defaultNodeColor');
context.stroke();
} else {
sigma.canvas.nodes.image.cache(url);
sigma.canvas.nodes.def.apply(
sigma.canvas.nodes,
args
);
}
};
// Let's add a public method to cache images, to make it possible to
// preload images before the initial rendering:
renderer.cache = function(url, callback) {
if (callback)
_callbacks[url] = callback;
if (_loading[url])
return;
var img = new Image();
img.onload = function() {
_loading[url] = false;
_cache[url] = img;
if (_callbacks[url]) {
_callbacks[url].call(this, img);
delete _callbacks[url];
}
};
_loading[url] = true;
img.src = url;
};
return renderer;
})();
var i,
s,
o,
offset_left = 0.5,
N = 1,
E = 40,
C = 5,
d = 0.5,
cs = [],
g = {
nodes: [],
edges: []
};
if (!sigma.classes.graph.hasMethod('neighbors')){
sigma.classes.graph.addMethod('neighbors', function(nodeId) {
var k,
neighbors = {},
index = this.allNeighborsIndex[nodeId] || {};
for (k in index)
neighbors[k] = this.nodesIndex[k];
return neighbors;
});
}
//adding the central node
g.nodes.push({
id: 4058,
label: 'Chetan Chitnis',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/09/research.pasteur.fr_chitnis_photo-150x150.jpg',
x: 0,
y: 0,
size: 30,
color: '#DDDDDD'
});
var biggest_node_size = 0;
N=30
// adding node
var x_node = Math.cos(2 * 0 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 0 * Math.PI / N) * 10;
g.nodes.push({
id: 248926,
label: 'EVENT: Department of Parasites and Insect Vectors Seminar : Zbynek BOZDECH “Deciphering Modes of Action of Antimalarial Drugs by Thermal Protein Profiling',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/fr/event/department-of-parasites-and-insect-vectors-seminar-zbynek-bozdech-deciphering-modes-of-action-of-antimalarial-drugs-by-thermal-protein-profiling/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 4058248926,
size: 0.5,
source: 4058,
target: 248926,
});
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4058) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 2489264058,
size: 0.5,
source: 248926,
target: 4058 });
// adding node
var x_node = Math.cos(2 * 1 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 1 * Math.PI / N) * 10;
g.nodes.push({
id: 244740,
label: 'EVENT: Nur Elyza BINTE ZULKIFLI Thesis defense « Evaluation of Inhibitors Targeting Human Peroxiredoxin 6 – Phospholipase A2 Activity as Drugs for Malaria »',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/fr/event/nur-elyza-binte-zulkifli-thesis-defense-evaluation-of-inhibitors-targeting-human-peroxiredoxin-6-phospholipase-a2-activity-as-drugs-for-malaria/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 4058244740,
size: 0.5,
source: 4058,
target: 244740,
});
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4058) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 2447404058,
size: 0.5,
source: 244740,
target: 4058 });
// adding node
var x_node = Math.cos(2 * 2 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 2 * Math.PI / N) * 10;
g.nodes.push({
id: 244341,
label: 'EVENT: Department of Parasites and Insect Vectors Seminar : Rob MOON “Reassessing merozoite invasion processes and malaria vaccine development using Plasmodium knowlesi”',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/fr/event/department-of-parasites-and-insect-vectors-seminar-rob-moon-reassessing-merozoite-invasion-processes-and-malaria-vaccine-development-using-plasmodium-knowlesi/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 4058244341,
size: 0.5,
source: 4058,
target: 244341,
});
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4058) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 2443414058,
size: 0.5,
source: 244341,
target: 4058 });
// adding node
var x_node = Math.cos(2 * 3 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 3 * Math.PI / N) * 10;
g.nodes.push({
id: 244027,
label: 'COURSE: Pasteur Course Vaccinology',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/fr/course/pasteur-course-vaccinology/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 4058244027,
size: 0.5,
source: 4058,
target: 244027,
});
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4058) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 2440274058,
size: 0.5,
source: 244027,
target: 4058 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4790,
label: 'Armelle Phalipon',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_phalipon-150x150.jpeg',
page_url: 'https://research.pasteur.fr/fr/member/armelle-phalipon/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 2440274790,
size: 0.5,
source: 244027,
target: 4790 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 2624,
label: 'Arnaud Fontanet',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_arnaud-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/arnaud-fontanet/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 2440272624,
size: 0.5,
source: 244027,
target: 2624 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 7063,
label: 'Monica Sala',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/05/research_pasteur-monica-sala-research-pasteur-monica-sala-monicaphoto2020-3-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/monica-sala/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 2440277063,
size: 0.5,
source: 244027,
target: 7063 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 7199,
label: 'Hervé Waxin',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_herve-150x150.jpeg',
page_url: 'https://research.pasteur.fr/fr/member/herve-waxin/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 2440277199,
size: 0.5,
source: 244027,
target: 7199 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 90725,
label: 'Virginie Ponticelli',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/fr/member/virginie-ponticelli/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 24402790725,
size: 0.5,
source: 244027,
target: 90725 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 232303,
label: 'Sarah Michel-Anfray',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/fr/member/sarah-michel-anfray/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 244027232303,
size: 0.5,
source: 244027,
target: 232303 });
// adding node
var x_node = Math.cos(2 * 4 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 4 * Math.PI / N) * 10;
g.nodes.push({
id: 242266,
label: 'EVENT: Department of Parasites and Insect Vectors Extraordinary Seminar :Neta REGEV RUDZK “The Social Network of Malaria Parasites”',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/fr/event/department-of-parasites-and-insect-vectors-extraordinary-seminar-neta-regev-rudzk-the-social-network-of-malaria-parasites/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 4058242266,
size: 0.5,
source: 4058,
target: 242266,
});
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4058) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 2422664058,
size: 0.5,
source: 242266,
target: 4058 });
// adding node
var x_node = Math.cos(2 * 5 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 5 * Math.PI / N) * 10;
g.nodes.push({
id: 240828,
label: 'TEAM: U1347 – ParasitInnov',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/fr/team/u1347-parasitinnov/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 4058240828,
size: 0.5,
source: 4058,
target: 240828,
});
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4058) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 2408284058,
size: 0.5,
source: 240828,
target: 4058 });
// adding node
var x_node = Math.cos(2 * 6 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 6 * Math.PI / N) * 10;
g.nodes.push({
id: 233094,
label: 'PROJECT: Pasteur-Cnam-EHESP school of public health',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/fr/project/pasteur-cnam-ehesp-school-of-public-health/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 4058233094,
size: 0.5,
source: 4058,
target: 233094,
});
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4266,
label: 'Laura Schaeffer',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_schaeffer-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/laura-schaeffer/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 2330944266,
size: 0.5,
source: 233094,
target: 4266 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4267,
label: 'Laura Tondeur',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/09/research.pasteur.fr_research.pasteur.fr_tondeur-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/laura-tondeur/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 2330944267,
size: 0.5,
source: 233094,
target: 4267 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4263,
label: 'Yoann Madec',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_madec-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/yoann-madec/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 2330944263,
size: 0.5,
source: 233094,
target: 4263 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4380,
label: 'Lénaig Le Fouler',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2017/02/research.pasteur.fr_lle_fouler_photo-150x150.png',
page_url: 'https://research.pasteur.fr/fr/member/lenaig-le-fouler/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 2330944380,
size: 0.5,
source: 233094,
target: 4380 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4379,
label: 'Bich-Tram Huynh',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_bth-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/bich-tram-huynh/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 2330944379,
size: 0.5,
source: 233094,
target: 4379 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4272,
label: 'Muriel Vray',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_vray-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/muriel-vray/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 2330944272,
size: 0.5,
source: 233094,
target: 4272 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 80011,
label: 'Vincent Guillemot',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2016/11/research.pasteur.fr_vincent-guillemot-1-e1479989507346-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/vincent-guillemot/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 23309480011,
size: 0.5,
source: 233094,
target: 80011 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4209,
label: 'Dea Garcia-Hermoso',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_dgh-150x150.png',
page_url: 'https://research.pasteur.fr/fr/member/dea-garcia-hermoso/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 2330944209,
size: 0.5,
source: 233094,
target: 4209 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
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//link to content
g.edges.push({
id: 1187174058,
size: 0.5,
source: 118717,
target: 4058 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 11467,
label: '',
type: 'image',
url: '',
page_url: '',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 11871711467,
size: 0.5,
source: 118717,
target: 11467 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 95085) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 11871795085,
size: 0.5,
source: 118717,
target: 95085 });
// adding node
var x_node = Math.cos(2 * 22 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 22 * Math.PI / N) * 10;
g.nodes.push({
id: 114572,
label: 'EVENT: “Development of Broadly-Neutralising Vaccines against the Blood-Stage Human Malaria Parasite”- Simon Draper',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/fr/event/development-of-broadly-neutralising-vaccines-against-the-blood-stage-human-malaria-parasite-simon-draper/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 4058114572,
size: 0.5,
source: 4058,
target: 114572,
});
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4058) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 1145724058,
size: 0.5,
source: 114572,
target: 4058 });
// adding node
var x_node = Math.cos(2 * 23 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 23 * Math.PI / N) * 10;
g.nodes.push({
id: 88159,
label: 'EVENT: “Pre-mortem and post-mortem research on life-threatening paediatric infections”',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/fr/event/pre-mortem-and-post-mortem-research-on-life-threatening-paediatric-infections/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 405888159,
size: 0.5,
source: 4058,
target: 88159,
});
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4058) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 881594058,
size: 0.5,
source: 88159,
target: 4058 });
// adding node
var x_node = Math.cos(2 * 24 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 24 * Math.PI / N) * 10;
g.nodes.push({
id: 71133,
label: 'EVENT: “Conserved machinery underlying malaria parasite virulence in rodents and humans”',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/fr/event/conserved-machinery-underlying-malaria-parasite-virulence-in-rodents-and-humans/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 405871133,
size: 0.5,
source: 4058,
target: 71133,
});
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4058) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 711334058,
size: 0.5,
source: 71133,
target: 4058 });
// adding node
var x_node = Math.cos(2 * 25 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 25 * Math.PI / N) * 10;
g.nodes.push({
id: 69126,
label: 'EVENT: “The Role of Cyclic Nucleotide Signalling in Malaria Parasites”',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/fr/event/the-role-of-cyclic-nucleotide-signalling-in-malaria-parasites/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 405869126,
size: 0.5,
source: 4058,
target: 69126,
});
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4058) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 691264058,
size: 0.5,
source: 69126,
target: 4058 });
// adding node
var x_node = Math.cos(2 * 26 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 26 * Math.PI / N) * 10;
g.nodes.push({
id: 69124,
label: 'EVENT: Targeting a mechanism of artemisinin resistance in malaria and crossing the rubicon',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/fr/event/targeting-a-mechanism-of-artemisinin-resistance-in-malaria-and-crossing-the-rubicon/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 405869124,
size: 0.5,
source: 4058,
target: 69124,
});
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4058) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 691244058,
size: 0.5,
source: 69124,
target: 4058 });
// adding node
var x_node = Math.cos(2 * 27 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 27 * Math.PI / N) * 10;
g.nodes.push({
id: 61943,
label: 'EVENT: “High throughput approaches to understanding Plasmodium erythrocyte invasion”',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/fr/event/high-throughput-approaches-to-understanding-plasmodium-erythrocyte-invasion/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 405861943,
size: 0.5,
source: 4058,
target: 61943,
});
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4058) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 619434058,
size: 0.5,
source: 61943,
target: 4058 });
// adding node
var x_node = Math.cos(2 * 28 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 28 * Math.PI / N) * 10;
g.nodes.push({
id: 6210,
label: 'TEAM: Biologie de Plasmodium et Vaccins',
x: x_node,
y: y_node,
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/05/research.pasteur.fr_malaria-parasite-biology-and-vaccines-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/team/malaria-parasite-biology-and-vaccines/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 40586210,
size: 0.5,
source: 4058,
target: 6210,
});
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4063) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 62104063,
size: 0.5,
source: 6210,
target: 4063 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 7022,
label: 'Maryse Brandt',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/08/research.pasteur.fr_brandt-maryse-2014-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/maryse-brandt/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 62107022,
size: 0.5,
source: 6210,
target: 7022 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4942) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 62104942,
size: 0.5,
source: 6210,
target: 4942 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 95085) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 621095085,
size: 0.5,
source: 6210,
target: 95085 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 237127,
label: 'Alberto Ayllon Hermida',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/fr/member/alberto-ayllon-hermida/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 6210237127,
size: 0.5,
source: 6210,
target: 237127 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4058) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 62104058,
size: 0.5,
source: 6210,
target: 4058 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 249886,
label: 'Gracie Hilaire Amourda',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/fr/member/gracie-hilaire-amourda/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 6210249886,
size: 0.5,
source: 6210,
target: 249886 });
// adding node
var x_node = Math.cos(2 * 29 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 29 * Math.PI / N) * 10;
g.nodes.push({
id: 30,
label: 'DEPARTMENT: Parasites et Insectes Vecteurs',
x: x_node,
y: y_node,
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/06/research.pasteur.fr_parasites-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/department/parasites-and-insect-vectors/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 405830,
size: 0.5,
source: 4058,
target: 30,
});
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 81566,
label: 'Selima Messaoudi',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/fr/member/selima-messaoudi/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 3081566,
size: 0.5,
source: 30,
target: 81566 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 64135,
label: 'Lucy Glover',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2016/05/research.pasteur.fr_mg_6640_2-5-e1462169014338-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/lucy-glover/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 3064135,
size: 0.5,
source: 30,
target: 64135 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4058) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 304058,
size: 0.5,
source: 30,
target: 4058 });
var s = new sigma({
//container: document.getElementById('graph-main'),
graph: g,
renderer: {
// IMPORTANT:
// This works only with the canvas renderer, so the
// renderer type set as "canvas" is necessary here.
container: document.getElementById('graph-main'),
type: 'canvas'
},
settings: {
minNodeSize: 6,
maxNodeSize: 35,
mouseWheelEnabled: false,
font: 'Montserrat',
labelThreshold:25,
borderSize:1,
defaultNodeBorderColor: '#999',
sideMargin:25,
}
});
// We first need to save the original colors of our
// nodes and edges, like this:
s.graph.nodes().forEach(function(n) {
n.originalColor = n.color;
});
s.graph.edges().forEach(function(e) {
e.originalColor = e.color;
});
// When a node is clicked, we check for each node
// if it is a neighbor of the clicked one. If not,
// we set its color as grey, and else, it takes its
// original color.
// We do the same for the edges, and we only keep
// edges that have both extremities colored.
s.bind('clickNode', function(e) {
var nodeId = e.data.node.id,
toKeep = s.graph.neighbors(nodeId);
toKeep[nodeId] = e.data.node;
s.graph.nodes().forEach(function(n) {
if (toKeep[n.id])
n.color = '#35a9f5';
else
n.color = '#dddddd';
});
s.graph.edges().forEach(function(e) {
if (toKeep[e.source] && toKeep[e.target])
e.color = '#35a9f5';
else
e.color = '#dddddd';
});
// Since the data has been modified, we need to
// call the refresh method to make the colors
// update effective.
s.refresh();
});
// When the stage is clicked, we just color each
// node and edge with its original color.
s.bind('clickStage', function(e) {
s.graph.nodes().forEach(function(n) {
n.color = n.originalColor;
});
s.graph.edges().forEach(function(e) {
e.color = e.originalColor;
});
// Same as in the previous event:
s.refresh();
});
s.bind("doubleClickNode", function (e) {
$("#canvas-wrap, .sigma-scene, .sigma-mouse").val();
ajax_load_page( e.data.node.page_url );
});
var c = s.camera;
s.bind("rightClickStage", function (e) {
sigma.misc.animation.camera(c, {
ratio: c.ratio * c.settings('zoomingRatio')
}, {
duration: 200
});
});
// Configure the noverlap layout:
var noverlapListener = s.configNoverlap({
nodeMargin: 10,
scaleNodes: 0.3,
gridSize: 1,
easing: 'quadraticInOut', // animation transition function
duration: 4000 // animation duration. Long here for the purposes of this example only
});
// Bind the events:
noverlapListener.bind('start stop interpolate', function(e) {
//console.log(e.type);
if(e.type === 'start') {
//console.time('noverlap');
}
if(e.type === 'interpolate') {
//console.timeEnd('noverlap');
}
});
// Start the layout:
s.startNoverlap();
//s.refresh();
// Initialize the dragNodes plugin:
var dragListener = sigma.plugins.dragNodes(s, s.renderers[0]);
dragListener.bind('startdrag', function(event) {
});
dragListener.bind('drag', function(event) {
});
dragListener.bind('drop', function(event) {
});
dragListener.bind('dragend', function(event) {
});