GUIDE
- Left-click and drag the background to move the graph
- Left-click and drag the nodes to reorganize
- Left-click a node to view first level connections
- Double left-click a node to navigate to its page
- Double left-click the background to zoom in
- Right-click the background to zoom out
sigma.utils.pkg('sigma.canvas.nodes');
sigma.canvas.nodes.image = (function() {
var _cache = {},
_loading = {},
_callbacks = {};
// Return the renderer itself:
var renderer = function(node, context, settings) {
var args = arguments,
prefix = settings('prefix') || '',
size = node[prefix + 'size'],
color = node.color || settings('defaultNodeColor'),
url = node.url;
if (_cache[url]) {
context.save();
// Draw the clipping disc:
context.beginPath();
context.arc(
node[prefix + 'x'],
node[prefix + 'y'],
node[prefix + 'size'],
0,
Math.PI * 2,
true
);
context.closePath();
context.clip();
// Draw the image
context.drawImage(
_cache[url],
node[prefix + 'x'] - size,
node[prefix + 'y'] - size,
2 * size,
2 * size
);
// Quit the "clipping mode":
context.restore();
// Draw the border:
context.beginPath();
context.arc(
node[prefix + 'x'],
node[prefix + 'y'],
node[prefix + 'size'],
0,
Math.PI * 2,
true
);
context.lineWidth = 1;
context.strokeStyle = node.color || settings('defaultNodeColor');
context.stroke();
} else {
sigma.canvas.nodes.image.cache(url);
sigma.canvas.nodes.def.apply(
sigma.canvas.nodes,
args
);
}
};
// Let's add a public method to cache images, to make it possible to
// preload images before the initial rendering:
renderer.cache = function(url, callback) {
if (callback)
_callbacks[url] = callback;
if (_loading[url])
return;
var img = new Image();
img.onload = function() {
_loading[url] = false;
_cache[url] = img;
if (_callbacks[url]) {
_callbacks[url].call(this, img);
delete _callbacks[url];
}
};
_loading[url] = true;
img.src = url;
};
return renderer;
})();
var i,
s,
o,
offset_left = 0.5,
N = 1,
E = 40,
C = 5,
d = 0.5,
cs = [],
g = {
nodes: [],
edges: []
};
if (!sigma.classes.graph.hasMethod('neighbors')){
sigma.classes.graph.addMethod('neighbors', function(nodeId) {
var k,
neighbors = {},
index = this.allNeighborsIndex[nodeId] || {};
for (k in index)
neighbors[k] = this.nodesIndex[k];
return neighbors;
});
}
//adding the central node
g.nodes.push({
id: 3915,
label: 'Marco Bellinzoni',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/05/research_pasteur-marco-bellinzoni-img-0074-2-150x150.jpg',
x: 0,
y: 0,
size: 30,
color: '#DDDDDD'
});
var biggest_node_size = 0;
N=8
// adding node
var x_node = Math.cos(2 * 0 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 0 * Math.PI / N) * 10;
g.nodes.push({
id: 240886,
label: 'PROJECT: T7SSb Characterization',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/fr/project/t7ssb-characterization/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 3915240886,
size: 0.5,
source: 3915,
target: 240886,
});
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 3915) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 2408863915,
size: 0.5,
source: 240886,
target: 3915 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 219311,
label: 'Palak Agrawal',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2024/02/research_pasteur-enpalak-agrawalfrpalak-agrawal-8a0805a7-7432-4b62-b09d-3297bd0bf3ab-e1708776255361-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/palak-agrawal/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 240886219311,
size: 0.5,
source: 240886,
target: 219311 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4315,
label: 'Francesca Gubellini',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2018/02/research_pasteur-francesca-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/francesca-gubellini/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 2408864315,
size: 0.5,
source: 240886,
target: 4315 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4905,
label: 'Shaynoor Dramsi',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2017/09/research_pasteur-shaynoor-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/shaynoor-dramsi/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 2408864905,
size: 0.5,
source: 240886,
target: 4905 });
// adding node
var x_node = Math.cos(2 * 1 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 1 * Math.PI / N) * 10;
g.nodes.push({
id: 175015,
label: 'TEAM: Mécanismes du Cycle Cellulaire Bactérien',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/fr/team/bacterial-cell-cycle-mechanisms/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 3915175015,
size: 0.5,
source: 3915,
target: 175015,
});
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 48532,
label: 'Mariano Martinez',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2020/05/research_pasteur-personal-photo-1-150x150.png',
page_url: 'https://research.pasteur.fr/fr/member/mariano-martinez/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 17501548532,
size: 0.5,
source: 175015,
target: 48532 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 180548,
label: 'Giacomo Carloni',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2024/05/research_pasteur-photo-e1715084543582-150x150.jpeg',
page_url: 'https://research.pasteur.fr/fr/member/giacomo-carloni/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 175015180548,
size: 0.5,
source: 175015,
target: 180548 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 8419,
label: 'Stéphanie Petrella',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2019/02/research_pasteur-photo-sp-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/stephanie-petrella/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 1750158419,
size: 0.5,
source: 175015,
target: 8419 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 216044,
label: 'Yaelle Wormser',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2023/12/research_pasteur-enyaelle-wormserfryaelle-wormser-whatsapp-image-2023-12-30-at-23.52.22-150x150.jpeg',
page_url: 'https://research.pasteur.fr/fr/member/yaelle-wormser/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 175015216044,
size: 0.5,
source: 175015,
target: 216044 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 92036,
label: 'Marie De Tarragon',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/fr/member/marie-de-tarragon/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 17501592036,
size: 0.5,
source: 175015,
target: 92036 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 237162,
label: 'Gabriel Brunk',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2025/01/research_pasteur-engabriel-brunkfrgabriel-brunk-20250121-093732-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/gabriel-brunk/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 175015237162,
size: 0.5,
source: 175015,
target: 237162 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 237159,
label: 'Yves-Marie Boudehen',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/fr/member/yves-marie-boudehen/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 175015237159,
size: 0.5,
source: 175015,
target: 237159 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 253128,
label: 'Adria Sogues Castrejon',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2025/11/research_pasteur-adria-sogues-castrejon-research-pasteur-adria-sogues-castrejon-capture-decran-2025-11-12-a-13.54.06-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/adria-sogues-castrejon/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 175015253128,
size: 0.5,
source: 175015,
target: 253128 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 253831,
label: 'Tamara Kovacs',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/fr/member/tamara-kovacs/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 175015253831,
size: 0.5,
source: 175015,
target: 253831 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 253829,
label: 'Xinyu Liu',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/fr/member/xinyu-liu/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 175015253829,
size: 0.5,
source: 175015,
target: 253829 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 253825,
label: 'Margot Momey',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/fr/member/margot-momey/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 175015253825,
size: 0.5,
source: 175015,
target: 253825 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 233000,
label: 'Martina ROVERSI',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/fr/member/martina-roversi/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 175015233000,
size: 0.5,
source: 175015,
target: 233000 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 8380,
label: 'Mathilde Ben Assaya',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/05/research_pasteur-mathilde-ben-assaya-1637227065938-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/mathilde-ben-assaya/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 1750158380,
size: 0.5,
source: 175015,
target: 8380 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 3915) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 1750153915,
size: 0.5,
source: 175015,
target: 3915 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 3920,
label: 'Anne Marie Wehenkel',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/05/research_pasteur-enanne-marie-wehenkelfrannemarie-wehenkel-research-pasteur-enanne-marie-wehenkelfrannemarie-wehenkel-wehenkel-photo-2021-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/annemarie-wehenkel/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 1750153920,
size: 0.5,
source: 175015,
target: 3920 });
// adding node
var x_node = Math.cos(2 * 2 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 2 * Math.PI / N) * 10;
g.nodes.push({
id: 126570,
label: 'PROJECT: METACTINO',
x: x_node,
y: y_node,
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2019/05/research_pasteur-supercplx_shema_new-150x150.png',
page_url: 'https://research.pasteur.fr/fr/project/metactino/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 3915126570,
size: 0.5,
source: 3915,
target: 126570,
});
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 126545,
label: 'Lu Yang',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/fr/?post_type=member&p=126545',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 126570126545,
size: 0.5,
source: 126570,
target: 126545 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4315) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 1265704315,
size: 0.5,
source: 126570,
target: 4315 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 3915) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 1265703915,
size: 0.5,
source: 126570,
target: 3915 });
// adding node
var x_node = Math.cos(2 * 3 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 3 * Math.PI / N) * 10;
g.nodes.push({
id: 63385,
label: 'PROJECT: MM4TB',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/fr/project/mm4tb/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 391563385,
size: 0.5,
source: 3915,
target: 63385,
});
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 3915) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 633853915,
size: 0.5,
source: 63385,
target: 3915 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 3913,
label: 'Claudine Mayer',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_claudine_photo.001-001-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/claudine-mayer/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 633853913,
size: 0.5,
source: 63385,
target: 3913 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 8419) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 633858419,
size: 0.5,
source: 63385,
target: 8419 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 2487,
label: 'Pedro Alzari',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/03/palzari-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/pedro-alzari/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 633852487,
size: 0.5,
source: 63385,
target: 2487 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 3992,
label: 'Roland Brosch',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/12/research.pasteur.fr_roland1-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/roland-brosch/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 633853992,
size: 0.5,
source: 63385,
target: 3992 });
// adding node
var x_node = Math.cos(2 * 4 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 4 * Math.PI / N) * 10;
g.nodes.push({
id: 63361,
label: 'PROJECT: SUPERCPLX',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/fr/project/supercplx/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 391563361,
size: 0.5,
source: 3915,
target: 63361,
});
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 3916,
label: '',
type: 'image',
url: '',
page_url: '',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 633613916,
size: 0.5,
source: 63361,
target: 3916 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 3170,
label: '',
type: 'image',
url: '',
page_url: '',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 633613170,
size: 0.5,
source: 63361,
target: 3170 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 1035,
label: 'Bertrand Raynal',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/03/Bertrand1-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/bertrand-raynal/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 633611035,
size: 0.5,
source: 63361,
target: 1035 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 1056,
label: 'Mariette Matondo',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/02/Mariette_Matondo-e1424076805247-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/mariette-matondo-bouzanda/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 633611056,
size: 0.5,
source: 63361,
target: 1056 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 1058,
label: 'Thibault Chaze',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/fr/?post_type=member&p=1058',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 633611058,
size: 0.5,
source: 63361,
target: 1058 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 2487) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 633612487,
size: 0.5,
source: 63361,
target: 2487 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 3915) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 633613915,
size: 0.5,
source: 63361,
target: 3915 });
// adding node
var x_node = Math.cos(2 * 5 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 5 * Math.PI / N) * 10;
g.nodes.push({
id: 24150,
label: 'TEAM: Biologie structurale d’enzymes et complexes métaboliques',
x: x_node,
y: y_node,
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/05/research.pasteur.fr_structural-microbiology-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/team/group-marco-bellinzoni/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 391524150,
size: 0.5,
source: 3915,
target: 24150,
});
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 174861,
label: 'Hajar Boulouiz',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2022/01/research_pasteur-hajar-boulouiz-img-3599-copy-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/hajar-boulouiz/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 24150174861,
size: 0.5,
source: 24150,
target: 174861 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 8380) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 241508380,
size: 0.5,
source: 24150,
target: 8380 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 233000) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 24150233000,
size: 0.5,
source: 24150,
target: 233000 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 3915) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 241503915,
size: 0.5,
source: 24150,
target: 3915 });
// adding node
var x_node = Math.cos(2 * 6 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 6 * Math.PI / N) * 10;
g.nodes.push({
id: 20112,
label: 'PROJECT: PknA/PknB in mycobacterial cell division',
x: x_node,
y: y_node,
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2018/02/research_pasteur-pknb-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/project/pknapknb-in-mycobacterial-cell-division/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 391520112,
size: 0.5,
source: 3915,
target: 20112,
});
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 3915) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 201123915,
size: 0.5,
source: 20112,
target: 3915 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 3920) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 201123920,
size: 0.5,
source: 20112,
target: 3920 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 2487) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 201122487,
size: 0.5,
source: 20112,
target: 2487 });
// adding node
var x_node = Math.cos(2 * 7 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 7 * Math.PI / N) * 10;
g.nodes.push({
id: 20108,
label: 'PROJECT: Control of glutamate metabolism in mycobacteria',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/fr/project/control-of-glutamate-metabolism-in-mycobacteria/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 391520108,
size: 0.5,
source: 3915,
target: 20108,
});
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 2487) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 201082487,
size: 0.5,
source: 20108,
target: 2487 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 3915) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 201083915,
size: 0.5,
source: 20108,
target: 3915 });
var s = new sigma({
//container: document.getElementById('graph-main'),
graph: g,
renderer: {
// IMPORTANT:
// This works only with the canvas renderer, so the
// renderer type set as "canvas" is necessary here.
container: document.getElementById('graph-main'),
type: 'canvas'
},
settings: {
minNodeSize: 6,
maxNodeSize: 35,
mouseWheelEnabled: false,
font: 'Montserrat',
labelThreshold:25,
borderSize:1,
defaultNodeBorderColor: '#999',
sideMargin:25,
}
});
// We first need to save the original colors of our
// nodes and edges, like this:
s.graph.nodes().forEach(function(n) {
n.originalColor = n.color;
});
s.graph.edges().forEach(function(e) {
e.originalColor = e.color;
});
// When a node is clicked, we check for each node
// if it is a neighbor of the clicked one. If not,
// we set its color as grey, and else, it takes its
// original color.
// We do the same for the edges, and we only keep
// edges that have both extremities colored.
s.bind('clickNode', function(e) {
var nodeId = e.data.node.id,
toKeep = s.graph.neighbors(nodeId);
toKeep[nodeId] = e.data.node;
s.graph.nodes().forEach(function(n) {
if (toKeep[n.id])
n.color = '#35a9f5';
else
n.color = '#dddddd';
});
s.graph.edges().forEach(function(e) {
if (toKeep[e.source] && toKeep[e.target])
e.color = '#35a9f5';
else
e.color = '#dddddd';
});
// Since the data has been modified, we need to
// call the refresh method to make the colors
// update effective.
s.refresh();
});
// When the stage is clicked, we just color each
// node and edge with its original color.
s.bind('clickStage', function(e) {
s.graph.nodes().forEach(function(n) {
n.color = n.originalColor;
});
s.graph.edges().forEach(function(e) {
e.color = e.originalColor;
});
// Same as in the previous event:
s.refresh();
});
s.bind("doubleClickNode", function (e) {
$("#canvas-wrap, .sigma-scene, .sigma-mouse").val();
ajax_load_page( e.data.node.page_url );
});
var c = s.camera;
s.bind("rightClickStage", function (e) {
sigma.misc.animation.camera(c, {
ratio: c.ratio * c.settings('zoomingRatio')
}, {
duration: 200
});
});
// Configure the noverlap layout:
var noverlapListener = s.configNoverlap({
nodeMargin: 10,
scaleNodes: 0.3,
gridSize: 1,
easing: 'quadraticInOut', // animation transition function
duration: 4000 // animation duration. Long here for the purposes of this example only
});
// Bind the events:
noverlapListener.bind('start stop interpolate', function(e) {
//console.log(e.type);
if(e.type === 'start') {
//console.time('noverlap');
}
if(e.type === 'interpolate') {
//console.timeEnd('noverlap');
}
});
// Start the layout:
s.startNoverlap();
//s.refresh();
// Initialize the dragNodes plugin:
var dragListener = sigma.plugins.dragNodes(s, s.renderers[0]);
dragListener.bind('startdrag', function(event) {
});
dragListener.bind('drag', function(event) {
});
dragListener.bind('drop', function(event) {
});
dragListener.bind('dragend', function(event) {
});