GUIDE
- Left-click and drag the background to move the graph
- Left-click and drag the nodes to reorganize
- Left-click a node to view first level connections
- Double left-click a node to navigate to its page
- Double left-click the background to zoom in
- Right-click the background to zoom out
// graph team
sigma.utils.pkg('sigma.canvas.nodes');
sigma.canvas.nodes.image = (function() {
var _cache = {},
_loading = {},
_callbacks = {};
// Return the renderer itself:
var renderer = function(node, context, settings) {
var args = arguments,
prefix = settings('prefix') || '',
size = node[prefix + 'size'],
color = node.color || settings('defaultNodeColor'),
url = node.url;
if (_cache[url]) {
context.save();
// Draw the clipping disc:
context.beginPath();
context.arc(
node[prefix + 'x'],
node[prefix + 'y'],
node[prefix + 'size'],
0,
Math.PI * 2,
true
);
context.closePath();
context.clip();
// Draw the image
context.drawImage(
_cache[url],
node[prefix + 'x'] - size,
node[prefix + 'y'] - size,
2 * size,
2 * size
);
// Quit the "clipping mode":
context.restore();
// Draw the border:
context.beginPath();
context.arc(
node[prefix + 'x'],
node[prefix + 'y'],
node[prefix + 'size'],
0,
Math.PI * 2,
true
);
context.lineWidth = 1;
context.strokeStyle = node.color || settings('defaultNodeColor');
context.stroke();
} else {
sigma.canvas.nodes.image.cache(url);
sigma.canvas.nodes.def.apply(
sigma.canvas.nodes,
args
);
}
};
// Let's add a public method to cache images, to make it possible to
// preload images before the initial rendering:
renderer.cache = function(url, callback) {
if (callback)
_callbacks[url] = callback;
if (_loading[url])
return;
var img = new Image();
img.onload = function() {
_loading[url] = false;
_cache[url] = img;
if (_callbacks[url]) {
_callbacks[url].call(this, img);
delete _callbacks[url];
}
};
_loading[url] = true;
img.src = url;
};
return renderer;
})();
var i,
s,
o,
offset_left = 0.5,
N = 1,
E = 40,
C = 5,
d = 0.5,
cs = [],
g = {
nodes: [],
edges: []
};
if (!sigma.classes.graph.hasMethod('neighbors')){
sigma.classes.graph.addMethod('neighbors', function(nodeId) {
var k,
neighbors = {},
index = this.allNeighborsIndex[nodeId] || {};
for (k in index)
neighbors[k] = this.nodesIndex[k];
return neighbors;
});
}
//adding the central node
g.nodes.push({
id: 122046,
label: 'Physiopathologie du système immunitaire',
type: 'image',
url: '',
x: 0,
y: 0,
size: 30,
color: '#DDDDDD'
});
N=4
var x_node = Math.cos(2 * 0 * Math.PI / N) * 2;
var y_node = Math.sin(2 * 0 * Math.PI / N) * 2;
var biggest_node_size = 0;
//check if content already exist
x_site = Math.cos(2 * 0 * Math.PI / N) * 2;
y_site = Math.sin(2 * 0 * Math.PI / N) * 2;
// adding site
g.nodes.push({
id: 3982,
label: 'Philippe Bousso',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/09/research.pasteur.fr_photopb-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/philippe-bousso/',
x: x_site,
y: y_site,
size: 16,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 1220463982,
size: 0.5,
source: 122046,
target: 3982 });
//check if content already exist
x_site = Math.cos(2 * 1 * Math.PI / N) * 2;
y_site = Math.sin(2 * 1 * Math.PI / N) * 2;
// adding site
g.nodes.push({
id: 4833,
label: 'Ana Cumano',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/09/research.pasteur.fr_ana-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/ana-cumano/',
x: x_site,
y: y_site,
size: 16,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 1220464833,
size: 0.5,
source: 122046,
target: 4833 });
//check if content already exist
x_site = Math.cos(2 * 2 * Math.PI / N) * 2;
y_site = Math.sin(2 * 2 * Math.PI / N) * 2;
// adding site
g.nodes.push({
id: 4176,
label: 'Ludovic Deriano',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2016/07/research.pasteur.fr_sans-titre-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/ludovic-deriano/',
x: x_site,
y: y_site,
size: 16,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 1220464176,
size: 0.5,
source: 122046,
target: 4176 });
//check if content already exist
x_site = Math.cos(2 * 3 * Math.PI / N) * 2;
y_site = Math.sin(2 * 3 * Math.PI / N) * 2;
// adding site
g.nodes.push({
id: 4180,
label: 'James Di Santo',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2016/05/research.pasteur.fr_photojd-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/james-di-santo/',
x: x_site,
y: y_site,
size: 16,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 1220464180,
size: 0.5,
source: 122046,
target: 4180 });
// update positions
x_node = Math.cos(2 * 0 * Math.PI / N) * 10;
y_node = Math.sin(2 * 0 * Math.PI / N) * 10;
N=4
// adding node
var x_node = Math.cos(2 * 0 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 0 * Math.PI / N) * 10;
g.nodes.push({
id: 175148,
label: 'NEWS: Graduate Student Fellowships to Study Human Mucosal Immunity',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/fr/news/graduate-student-fellowships-to-study-human-mucosal-immunity/',
size: 24,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 122046175148,
size: 0.5,
source: 122046,
target: 175148 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4180) {
n.size = n.size + 10;
if ( n.size > biggest_node_size ){
biggest_node_size = n.size;
}
}
});
g.nodes.forEach(function(n) {
if (n.id == 122046) {
if ( n.size < biggest_node_size ){
n.size = biggest_node_size;
}
}
});
//link to content
g.edges.push({
id: 1751484180,
size: 0.5,
source: 175148,
target: 4180 });
// adding node
var x_node = Math.cos(2 * 1 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 1 * Math.PI / N) * 10;
g.nodes.push({
id: 6118,
label: 'TEAM: Intégrité du Génome, Immunité et Cancer',
x: x_node,
y: y_node,
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2019/05/research_pasteur-unite-deriano-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/team/genome-integrity-immunity-cancer/',
size: 24,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 1220466118,
size: 0.5,
source: 122046,
target: 6118 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4177,
label: 'Chloé Lescale',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/09/research.pasteur.fr_photo_chloé-bis-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/chloe-lescale/',
x: x_site,
y: y_site,
size: 10,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 61184177,
size: 0.5,
source: 6118,
target: 4177 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 126065,
label: 'Estelle Vincendeau',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2019/05/research_pasteur-enestelle-vincendeaufrestelle-vincendeau-estelle-vincendeau-e1638375849848-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/estelle-vincendeau/',
x: x_site,
y: y_site,
size: 10,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 6118126065,
size: 0.5,
source: 6118,
target: 126065 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 62187,
label: 'Timea Marton',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2017/01/research.pasteur.fr_aaeaaqaaaaaaaabgaaaajgfkzguzyzvilweznjqtngq0yy1hytlkltlimtdkytyxzdjhzq-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/timea-marton/',
x: x_site,
y: y_site,
size: 10,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 611862187,
size: 0.5,
source: 6118,
target: 62187 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 7707,
label: 'Marie Bedora-Faure',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_marie_bedora-faure-150x150.png',
page_url: 'https://research.pasteur.fr/fr/member/marie-bedora-faure/',
x: x_site,
y: y_site,
size: 10,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 61187707,
size: 0.5,
source: 6118,
target: 7707 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 6814,
label: 'Danièle Sinnaya',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/09/research.pasteur.fr_daniele-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/daniele-sinnaya/',
x: x_site,
y: y_site,
size: 10,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 61186814,
size: 0.5,
source: 6118,
target: 6814 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 171243,
label: 'François Dossin',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2021/11/research_pasteur-francois-dossin-photo1-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/francois-dossin/',
x: x_site,
y: y_site,
size: 10,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 6118171243,
size: 0.5,
source: 6118,
target: 171243 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4969,
label: 'Robert Weil',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/06/research.pasteur.fr_group5-img003-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/robert-weil/',
x: x_site,
y: y_site,
size: 10,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 61184969,
size: 0.5,
source: 6118,
target: 4969 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 198558,
label: 'Marina Dockes',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/fr/member/marina-dockes/',
x: x_site,
y: y_site,
size: 10,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 6118198558,
size: 0.5,
source: 6118,
target: 198558 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 198556,
label: 'Guillaume Rode',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/fr/member/guillaume-rode/',
x: x_site,
y: y_site,
size: 10,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 6118198556,
size: 0.5,
source: 6118,
target: 198556 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 198597,
label: 'Alice Libri',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/fr/member/alice-libri/',
x: x_site,
y: y_site,
size: 10,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 6118198597,
size: 0.5,
source: 6118,
target: 198597 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 198601,
label: 'Camille Amourette',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/fr/member/camille-amourette/',
x: x_site,
y: y_site,
size: 10,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 6118198601,
size: 0.5,
source: 6118,
target: 198601 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4176) {
n.size = n.size + 10;
if ( n.size > biggest_node_size ){
biggest_node_size = n.size;
}
}
});
g.nodes.forEach(function(n) {
if (n.id == 122046) {
if ( n.size < biggest_node_size ){
n.size = biggest_node_size;
}
}
});
//link to content
g.edges.push({
id: 61184176,
size: 0.5,
source: 6118,
target: 4176 });
// adding node
var x_node = Math.cos(2 * 2 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 2 * Math.PI / N) * 10;
g.nodes.push({
id: 6169,
label: 'TEAM: Immunité innée',
x: x_node,
y: y_node,
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/06/research.pasteur.fr_hepvir-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/team/innate-immunity/',
size: 24,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 1220466169,
size: 0.5,
source: 122046,
target: 6169 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4186,
label: 'Hélène Strick-Marchand',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_helena-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/helene-strick-marchand/',
x: x_site,
y: y_site,
size: 10,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 61694186,
size: 0.5,
source: 6169,
target: 4186 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4187,
label: 'Christian Vosshenrich',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_c-vossenrich-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/christian-vosshenrich/',
x: x_site,
y: y_site,
size: 10,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 61694187,
size: 0.5,
source: 6169,
target: 4187 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4185,
label: 'Nicolas Serafini',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/08/research.pasteur.fr_photo-du-28-08-2015-a-18.55-11-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/nicolas-serafini/',
x: x_site,
y: y_site,
size: 10,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 61694185,
size: 0.5,
source: 6169,
target: 4185 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 69960,
label: 'Jean-Marc Doisne',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2016/05/research.pasteur.fr_jmd-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/jean-marc-daisne/',
x: x_site,
y: y_site,
size: 10,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 616969960,
size: 0.5,
source: 6169,
target: 69960 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
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label: 'Pedro Goncalves',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_ha18-150x150.jpeg',
page_url: 'https://research.pasteur.fr/fr/member/pedro-goncalves/',
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label: 'Laura Surace',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2016/05/research.pasteur.fr_foto-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/laura-surace/',
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label: 'Marie Solenne',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_fig94-150x150.jpg',
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label: 'Angélique Jarade',
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label: 'Giulia Girelli-Zubani',
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label: 'Anna Thaller',
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label: 'Evgeny Tatirovsky',
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label: 'Thibault Leray',
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page_url: 'https://research.pasteur.fr/fr/member/thibault-leray/',
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page_url: 'https://research.pasteur.fr/fr/member/remy-dailleux/',
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label: 'Elsa Bourayou',
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url: 'https://research.pasteur.fr/wp-content/uploads/2019/11/research_pasteur-elsa-150x150.jpeg',
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label: 'Bérengère Hugot',
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label: 'Zacarias Garcia',
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url: 'https://research.pasteur.fr/wp-content/uploads/2015/09/research.pasteur.fr_sg-150x150.jpg',
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label: 'Fabrice Lemaitre',
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label: 'Capucine Grandjean',
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label: 'Béatrice Corre',
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label: 'Margot Bardou',
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type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2022/01/research_pasteur-lea-feldmann-photo-id-lea-150x150.jpg',
page_url: 'https://research.pasteur.fr/fr/member/lea-feldmann/',
x: x_site,
y: y_site,
size: 10,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 6172174686,
size: 0.5,
source: 6172,
target: 174686 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 228385,
label: 'Camille Vaganay',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/fr/member/camille-vaganay/',
x: x_site,
y: y_site,
size: 10,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 6172228385,
size: 0.5,
source: 6172,
target: 228385 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 228389,
label: 'Baptiste Arnaud',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/fr/member/baptiste-arnaud/',
x: x_site,
y: y_site,
size: 10,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 6172228389,
size: 0.5,
source: 6172,
target: 228389 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 228394,
label: 'Adriana Lecourieux',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/fr/member/adriana-lecourieux/',
x: x_site,
y: y_site,
size: 10,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 6172228394,
size: 0.5,
source: 6172,
target: 228394 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 3982) {
n.size = n.size + 10;
if ( n.size > biggest_node_size ){
biggest_node_size = n.size;
}
}
});
g.nodes.forEach(function(n) {
if (n.id == 122046) {
if ( n.size < biggest_node_size ){
n.size = biggest_node_size;
}
}
});
//link to content
g.edges.push({
id: 61723982,
size: 0.5,
source: 6172,
target: 3982 });
var s = new sigma({
//container: document.getElementById('graph-main'),
graph: g,
renderer: {
// IMPORTANT:
// This works only with the canvas renderer, so the
// renderer type set as "canvas" is necessary here.
container: document.getElementById('graph-main'),
type: 'canvas'
},
settings: {
minNodeSize: 12,
maxNodeSize: 30,
mouseWheelEnabled: false,
font: 'Montserrat',
labelThreshold:25,
borderSize:1,
defaultNodeBorderColor: '#333',
sideMargin:25,
}
});
// We first need to save the original colors of our
// nodes and edges, like this:
s.graph.nodes().forEach(function(n) {
n.originalColor = n.color;
//console.log(n.id);
//console.log(s.graph.nodes(n.id));
});
s.graph.edges().forEach(function(e) {
e.originalColor = e.color;
});
// When a node is clicked, we check for each node
// if it is a neighbor of the clicked one. If not,
// we set its color as grey, and else, it takes its
// original color.
// We do the same for the edges, and we only keep
// edges that have both extremities colored.
s.bind('clickNode', function(e) {
var nodeId = e.data.node.id,
toKeep = s.graph.neighbors(nodeId);
toKeep[nodeId] = e.data.node;
s.graph.nodes().forEach(function(n) {
if (toKeep[n.id])
n.color = '#35a9f5';
else
n.color = '#dddddd';
});
s.graph.edges().forEach(function(e) {
if (toKeep[e.source] && toKeep[e.target])
e.color = '#35a9f5';
else
e.color = '#dddddd';
});
// Since the data has been modified, we need to
// call the refresh method to make the colors
// update effective.
s.refresh();
});
// When the stage is clicked, we just color each
// node and edge with its original color.
s.bind('clickStage', function(e) {
s.graph.nodes().forEach(function(n) {
n.color = n.originalColor;
});
s.graph.edges().forEach(function(e) {
e.color = e.originalColor;
});
// Same as in the previous event:
s.refresh();
});
s.bind("doubleClickNode", function (e) {
$("#canvas-wrap, .sigma-scene, .sigma-mouse").val();
ajax_load_page( e.data.node.page_url );
});
var c = s.camera;
s.bind("rightClickStage", function (e) {
sigma.misc.animation.camera(c, {
ratio: c.ratio * c.settings('zoomingRatio')
}, {
duration: 200
});
});
// Configure the noverlap layout:
var noverlapListener = s.configNoverlap({
nodeMargin: 10,
scaleNodes: 0.3,
gridSize: 1,
easing: 'quadraticInOut', // animation transition function
duration: 4000 // animation duration. Long here for the purposes of this example only
});
// Bind the events:
noverlapListener.bind('start stop interpolate', function(e) {
//console.log(e.type);
if(e.type === 'start') {
//console.time('noverlap');
}
if(e.type === 'interpolate') {
//console.timeEnd('noverlap');
}
});
// Start the layout:
s.startNoverlap();
//s.refresh();
// Initialize the dragNodes plugin:
var dragListener = sigma.plugins.dragNodes(s, s.renderers[0]);
dragListener.bind('startdrag', function(event) {
});
dragListener.bind('drag', function(event) {
});
dragListener.bind('drop', function(event) {
});
dragListener.bind('dragend', function(event) {
});