Sebastian Duchene - Evolutionary dynamics of infectious diseases - Research - Institut Pasteur

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whocc
project
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Administrative Staff
Assistant Professor
Associate Professor
Clinical Research Assistant
Clinical Research Nurse
Clinician Researcher
Department Manager
Dual-education Student
Full Professor
Honorary Professor
Lab assistant
Master Student
MD-PhD Student
Medical Staff
Non-permanent Researcher
Nursing Staff
Permanent Researcher
Pharmacist
PhD Student
Physician
Post-doc
Prize
Project Manager
Research Associate
Research Engineer
Retired scientist
Technician
Undergraduate Student
Veterinary
Visiting Scientist

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Deputy Director of Center
Deputy Director of Department
Deputy Director of National Reference Center
Deputy Head of Facility
Director of Center
Director of Department
Director of Institute
Director of National Reference Center
Group Leader
Head of Facility
Head of Operations
Head of Structure
Honorary President of the Departement
Labex Coordinator

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Immunity against plague and other Yersinioses

Group : Hematopoietic Development

Scientific Fields

Diseases

Organisms

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Technique

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Members

Sebastian Duchene

Head of Structure

Head

Permanent Researcher

Undergraduate Student

Alejandra de Selys Gómez

Undergraduate Student

Visiting Scientist

Projects

TraM – Trait-driven molecular clocks: dating the long-term evolution of re-emerging bacterial pathogens

Sebastian Duchene (PI)

Studying partner notification impact on pathogen epidemic control

Anna Zhukova (PI)

Partner notification (PN, or contact tracing) is a process in which contacts of detected infected individuals are identified and offered testing for infection. It has been applied to variousinfectious diseases, including syphilis, HIV, tuberculosis, […]

Software

bdpn

Anna Zhukova (PI)

Maximum-likelihood estimator of epidemiological parameters under the Birth-Death (BD) and BD with Partner Notification (PN) models from phylogenetic trees and a non-parametric PN detection test.

treesimulator

Anna Zhukova (PI)

Treesimulator is a python package for simulation of pathogen transmission trees under a given Multitype Birth–Death (MTBD) model, with or without partner notification (PN).

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Published on: 03 Oct 2023 • Modified on: 16 Apr 2025