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Universal cancer peptide-based therapeutic vaccine breaks tolerance against telomerase and eradicates established tumor

Integrins β1 and β3 exhibit distinct dynamic nanoscale organizations inside focal adhesions

© Research

Publication : Journal of computational biology : a journal of computational molecular cell biology

RNA locally optimal secondary structures

Team: Archived: Molecular Microbial Pathogenesis

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Diseases

Organisms

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Published in Journal of computational biology : a journal of computational molecular cell biology - 01 Oct 2012

Saffarian A, Giraud M, de Monte A, Touzet H

Link to Pubmed [PMID] – 23057822

J. Comput. Biol. 2012 Oct;19(10):1120-33

RNA locally optimal secondary structures provide a concise and exhaustive description of all possible secondary structures of a given RNA sequence, and hence a very good representation of the RNA folding space. In this paper, we present an efficient algorithm that computes all locally optimal secondary structures for any folding model that takes into account the stability of helical regions. This algorithm is implemented in a software called regliss that runs on a publicly accessible web server.

Published on: 01 Oct 2012