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© Research
Publication : Bioinformatics

RiboTools: a Galaxy toolbox for qualitative ribosome profiling analysis

Member: Rachel Legendre
Scientific Fields
Diseases
Organisms
Applications
Technique

Published in Bioinformatics - 15 Mar 2015

Rachel Legendre, Agnès Baudin-Baillieu, Isabelle Hatin and Olivier Namy

Link to Pubmed [PMID] – 25812744

Bioinformatics. 2015 Aug 1;31(15):2586-8

Ribosome profiling provides genome-wide information about translational regulation. However, there is currently no standard tool for the qualitative analysis of Ribo-seq data. We present here RiboTools, a Galaxy toolbox for the analysis of ribosome profiling (Ribo-seq) data. It can be used to detect translational ambiguities, stop codon readthrough events and codon occupancy. It provides a large number of plots for the visualisation of these events.