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Guides
  • 2022
    Dow LP, Gaietta G, Kaufman Y, Swift MF, Lemos M, Lane K, Hopcroft M, Bezault A, Sauvanet C, Volkmann N, Pruitt BL, Hanein D, , Morphological control enables nanometer-scale dissection of cell-cell signaling complexes., Nat Commun 2022 Dec; 13(1): 7831.
  • 2022
    Rodríguez de Francisco B, Bezault A, Xu XP, Hanein D, Volkmann N, , MEPSi: A tool for simulating tomograms of membrane-embedded proteins., J Struct Biol 2022 Dec; 214(4): 107921.
  • 2022
    Vilela F, Bezault A, Rodriguez de Francisco B, Sauvanet C, Xu XP, Swift MF, Yao Y, Marrasi FM, Hanein D, Volkmann N, , Characterization of heterogeneity in nanodisc samples using Feret signatures., J Struct Biol 2022 Dec; 214(4): 107916.
  • 2022
    Gaietta G, Kai F, Swift MF, Weaver VM, Volkmann N, Hanein D, , Novel cryo-tomography workflow reveals nanometer-scale responses of epithelial cells to matrix stiffness and dimensionality., Mol Biol Cell 2022 Oct; (): mbcE22030092.
  • 2022
    Kai F, Ou G, Tourdot RW, Stashko C, Gaietta G, Swift MF, Volkmann N, Long AF, Han Y, Huang HH, Northey JJ, Leidal AM, Viasnoff V, Bryant DM, Guo W, Wiita AP, Guo M, Dumont S, Hanein D, Radhakrishnan R, Weaver VM, , ECM dimensionality tunes actin tension to modulate endoplasmic reticulum function and spheroid phenotypes of mammary epithelial cells., EMBO J 2022 09; 41(17): e109205.
  • 2022
    Courtney KC, Wu L, Mandal T, Swift M, Zhang Z, Alaghemandi M, Wu Z, Bradberry MM, Deo C, Lavis LD, Volkmann N, Hanein D, Cui Q, Bao H, Chapman ER, , The complexin C-terminal amphipathic helix stabilizes the fusion pore open state by sculpting membranes., Nat Struct Mol Biol 2022 02; 29(2): 97-107.
  • 2021
    Gaietta G, Swift MF, Volkmann N, Hanein D, , Rapid tool for cell nanoarchitecture integrity assessment., J Struct Biol 2021 12; 213(4): 107801.
  • 2021
    Robert-Paganin J, Xu XP, Swift MF, Auguin D, Robblee JP, Lu H, Fagnant PM, Krementsova EB, Trybus KM, Houdusse A, Volkmann N, Hanein D, , The actomyosin interface contains an evolutionary conserved core and an ancillary interface involved in specificity., Nat Commun 2021 03; 12(1): 1892.
  • 2020
    Xu XP, Pokutta S, Torres M, Swift MF, Hanein D, Volkmann N, Weis WI, , Structural basis of αE-catenin-F-actin catch bond behavior., Elife 2020 09; 9(): .
  • 2020
    Poothong J, Pottekat A, Siirin M, Campos AR, Paton AW, Paton JC, Lagunas-Acosta J, Chen Z, Swift M, Volkmann N, Hanein D, Yong J, Kaufman RJ, , Factor VIII exhibits chaperone-dependent and glucose-regulated reversible amyloid formation in the endoplasmic reticulum., Blood 2020 05; 135(21): 1899-1911.
  • 2019
    Engel L, Gaietta G, Dow LP, Swift MF, Pardon G, Volkmann N, Weis WI, Hanein D, Pruitt BL, , Extracellular matrix micropatterning technology for whole cell cryogenic electron microscopy studies., J Micromech Microeng 2019 Nov; 29(11): .
  • 2019
    Marston DJ, Anderson KL, Swift MF, Rougie M, Page C, Hahn KM, Volkmann N, Hanein D, , High Rac1 activity is functionally translated into cytosolic structures with unique nanoscale cytoskeletal architecture., Proc Natl Acad Sci U S A 2019 01; 116(4): 1267-1272.
  • 2019
    López CA, Swift MF, Xu XP, Hanein D, Volkmann N, Gnanakaran S, , Biophysical Characterization of a Nanodisc with and without BAX: An Integrative Study Using Molecular Dynamics Simulations and Cryo-EM., Structure 2019 06; 27(6): 988-999.e4.
  • 2019
    Metlagel Z, Krey JF, Song J, Swift MF, Tivol WJ, Dumont RA, Thai J, Chang A, Seifikar H, Volkmann N, Hanein D, Barr-Gillespie PG, Auer M, , Electron cryo-tomography of vestibular hair-cell stereocilia., J Struct Biol 2019 05; 206(2): 149-155.
  • 2018
    Anderson KL, Swift MF, Hanein D, Volkmann N, , Does self-organized criticality drive leading edge protrusion?, Biophys Rev 2018 Dec; 10(6): 1571-1575.
  • 2018
    Kumar A, Anderson KL, Swift MF, Hanein D, Volkmann N, Schwartz MA, , Local Tension on Talin in Focal Adhesions Correlates with F-Actin Alignment at the Nanometer Scale., Biophys J 2018 10; 115(8): 1569-1579.
  • 2018
    Bottini M, Mebarek S, Anderson KL, Strzelecka-Kiliszek A, Bozycki L, Simão AMS, Bolean M, Ciancaglini P, Pikula JB, Pikula S, Magne D, Volkmann N, Hanein D, Millán JL, Buchet R, , Matrix vesicles from chondrocytes and osteoblasts: Their biogenesis, properties, functions and biomimetic models., Biochim Biophys Acta Gen Subj 2018 Mar; 1862(3): 532-546.
  • 2018
    Anderson KL, Page C, Swift MF, Hanein D, Volkmann N, , Marker-free method for accurate alignment between correlated light, cryo-light, and electron cryo-microscopy data using sample support features., J Struct Biol 2018 01; 201(1): 46-51.
  • 2018
    Hanein D, Volkmann N, , Conformational Equilibrium of Human Platelet Integrin Investigated by Three-Dimensional Electron Cryo-Microscopy., Subcell Biochem 2018 ; 87(): 353-363.
  • 2017
    Frankel EB, Shankar R, Moresco JJ, Yates JR, Volkmann N, Audhya A, , Ist1 regulates ESCRT-III assembly and function during multivesicular endosome biogenesis in Caenorhabditis elegans embryos., Nat Commun 2017 11; 8(1): 1439.
  • 2017
    Ariazi J, Benowitz A, De Biasi V, Den Boer ML, Cherqui S, Cui H, Douillet N, Eugenin EA, Favre D, Goodman S, Gousset K, Hanein D, Israel DI, Kimura S, Kirkpatrick RB, Kuhn N, Jeong C, Lou E, Mailliard R, Maio S, Okafo G, Osswald M, Pasquier J, Polak R, Pradel G, de Rooij B, Schaeffer P, Skeberdis VA, Smith IF, Tanveer A, Volkmann N, Wu Z, Zurzolo C, , Tunneling Nanotubes and Gap Junctions-Their Role in Long-Range Intercellular Communication during Development, Health, and Disease Conditions., Front Mol Neurosci 2017 ; 10(): 333.
  • 2017
    Anderson KL, Page C, Swift MF, Suraneni P, Janssen MEW, Pollard TD, Li R, Volkmann N, Hanein D, , Nano-scale actin-network characterization of fibroblast cells lacking functional Arp2/3 complex., J Struct Biol 2017 03; 197(3): 312-321.
  • 2016
    Fabre L, Santelli E, Mountassif D, Donoghue A, Biswas A, Blunck R, Hanein D, Volkmann N, Liddington R, Rouiller I, , Structure of anthrax lethal toxin prepore complex suggests a pathway for efficient cell entry., J Gen Physiol 2016 10; 148(4): 313-24.
  • 2016
    Xu XP, Kim E, Swift M, Smith JW, Volkmann N, Hanein D, , Three-Dimensional Structures of Full-Length, Membrane-Embedded Human α(IIb)β(3) Integrin Complexes., Biophys J 2016 Feb; 110(4): 798-809.
  • 2015
    McCabe Pryor M, Steinkamp MP, Halasz AM, Chen Y, Yang S, Smith MS, Zahoransky-Kohalmi G, Swift M, Xu XP, Hanein D, Volkmann N, Lidke DS, Edwards JS, Wilson BS, , Orchestration of ErbB3 signaling through heterointeractions and homointeractions., Mol Biol Cell 2015 Nov; 26(22): 4109-23.
  • 2015
    Hassler JR, Scheuner DL, Wang S, Han J, Kodali VK, Li P, Nguyen J, George JS, Davis C, Wu SP, Bai Y, Sartor M, Cavalcoli J, Malhi H, Baudouin G, Zhang Y, Yates JR, Itkin-Ansari P, Volkmann N, Kaufman RJ, , The IRE1α/XBP1s Pathway Is Essential for the Glucose Response and Protection of β Cells., PLoS Biol 2015 10; 13(10): e1002277.
  • 2015
    Xu XP, Volkmann N, , Validation methods for low-resolution fitting of atomic structures to electron microscopy data., Arch Biochem Biophys 2015 Sep; 581(): 49-53.
  • 2015
    Xu XP, Page C, Volkmann N, , Efficient Extraction of Macromolecular Complexes from Electron Tomograms Based on Reduced Representation Templates., Comput Anal Images Patterns 2015 Sep; 9256(): 423-431.
  • 2015
    Page C, Hanein D, Volkmann N, , Accurate membrane tracing in three-dimensional reconstructions from electron cryotomography data., Ultramicroscopy 2015 Aug; 155(): 20-26.
  • 2015
    Tee YH, Shemesh T, Thiagarajan V, Hariadi RF, Anderson KL, Page C, Volkmann N, Hanein D, Sivaramakrishnan S, Kozlov MM, Bershadsky AD, , Cellular chirality arising from the self-organization of the actin cytoskeleton., Nat Cell Biol 2015 Apr; 17(4): 445-57.
  • 2015
    Suraneni P, Fogelson B, Rubinstein B, Noguera P, Volkmann N, Hanein D, Mogilner A, Li R, , A mechanism of leading-edge protrusion in the absence of Arp2/3 complex., Mol Biol Cell 2015 Mar; 26(5): 901-12.
  • 2014
    Buckley CD, Tan J, Anderson KL, Hanein D, Volkmann N, Weis WI, Nelson WJ, Dunn AR, , Cell adhesion. The minimal cadherin-catenin complex binds to actin filaments under force., Science 2014 Oct; 346(6209): 1254211.
  • 2014
    Volkmann N, Page C, Li R, Hanein D, , Three-dimensional reconstructions of actin filaments capped by Arp2/3 complex., Eur J Cell Biol ; 93(5-6): 179-83.
  • 2014
    Volkmann N, Martásek P, Roman LJ, Xu XP, Page C, Swift M, Hanein D, Masters BS, , Holoenzyme structures of endothelial nitric oxide synthase – an allosteric role for calmodulin in pivoting the FMN domain for electron transfer., J Struct Biol 2014 Oct; 188(1): 46-54.
  • 2014
    Volkmann N, , The joys and perils of flexible fitting., Adv Exp Med Biol 2014 ; 805(): 137-55.
  • 2013
    Hansen SD, Kwiatkowski AV, Ouyang CY, Liu H, Pokutta S, Watkins SC, Volkmann N, Hanein D, Weis WI, Mullins RD, Nelson WJ, , αE-catenin actin-binding domain alters actin filament conformation and regulates binding of nucleation and disassembly factors., Mol Biol Cell 2013 Dec; 24(23): 3710-20.
  • 2013
    Cleyrat C, Darehshouri A, Anderson KL, Page C, Lidke DS, Volkmann N, Hanein D, Wilson BS, , The architectural relationship of components controlling mast cell endocytosis., J Cell Sci 2013 Nov; 126(Pt 21): 4913-25.
  • 2013
    Xu XP, Slaughter BD, Volkmann N, , Probabilistic determination of probe locations from distance data., J Struct Biol 2013 Oct; 184(1): 75-82.
  • 2013
    Goult BT, Xu XP, Gingras AR, Swift M, Patel B, Bate N, Kopp PM, Barsukov IL, Critchley DR, Volkmann N, Hanein D, , Structural studies on full-length talin1 reveal a compact auto-inhibited dimer: implications for talin activation., J Struct Biol 2013 Oct; 184(1): 21-32.
  • 2012
    Delorme-Walker V, Abrivard M, Lagal V, Anderson K, Perazzi A, Gonzalez V, Page C, Chauvet J, Ochoa W, Volkmann N, Hanein D, Tardieux I, , Toxofilin upregulates the host cortical actin cytoskeleton dynamics, facilitating Toxoplasma invasion., J Cell Sci 2012 Sep; 125(Pt 18): 4333-42.
  • 2012
    Burette AC, Lesperance T, Crum J, Martone M, Volkmann N, Ellisman MH, Weinberg RJ, , Electron tomographic analysis of synaptic ultrastructure., J Comp Neurol 2012 Aug; 520(12): 2697-711.
  • 2012
    Janssen ME, Liu H, Volkmann N, Hanein D, , The C-terminal tail domain of metavinculin, vinculin’s splice variant, severs actin filaments., J Cell Biol 2012 May; 197(5): 585-93.
  • 2012
    Pfaendtner J, Volkmann N, Hanein D, Dalhaimer P, Pollard TD, Voth GA, , Key structural features of the actin filament Arp2/3 complex branch junction revealed by molecular simulation., J Mol Biol 2012 Feb; 416(1): 148-61.
  • 2012
    Volkmann N, , Putting structure into context: fitting of atomic models into electron microscopic and electron tomographic reconstructions., Curr Opin Cell Biol 2012 Feb; 24(1): 141-7.
  • 2012
    Xu XP, Rouiller I, Slaughter BD, Egile C, Kim E, Unruh JR, Fan X, Pollard TD, Li R, Hanein D, Volkmann N, , Three-dimensional reconstructions of Arp2/3 complex with bound nucleation promoting factors., EMBO J 2012 Jan; 31(1): 236-47.
  • 2011
    Hanein D, Volkmann N, , Correlative light-electron microscopy., Adv Protein Chem Struct Biol 2011 ; 82(): 91-9.
  • 2010
    Hertzog M, Milanesi F, Hazelwood L, Disanza A, Liu H, Perlade E, Malabarba MG, Pasqualato S, Maiolica A, Confalonieri S, Le Clainche C, Offenhauser N, Block J, Rottner K, Di Fiore PP, Carlier MF, Volkmann N, Hanein D, Scita G, , Molecular basis for the dual function of Eps8 on actin dynamics: bundling and capping., PLoS Biol 2010 Jun; 8(6): e1000387.
  • 2010
    Srikrishna G, Nayak J, Weigle B, Temme A, Foell D, Hazelwood L, Olsson A, Volkmann N, Hanein D, Freeze HH, , Carboxylated N-glycans on RAGE promote S100A12 binding and signaling., J Cell Biochem 2010 Jun; 110(3): 645-59.
  • 2010
    Volkmann N, , Methods for segmentation and interpretation of electron tomographic reconstructions., Methods Enzymol 2010 ; 483(): 31-46.
  • 2009
    Volkmann N, , Confidence intervals for fitting of atomic models into low-resolution densities., Acta Crystallogr D Biol Crystallogr 2009 Jul; 65(Pt 7): 679-89.
  • 2008
    Garduño E, Wong-Barnum M, Volkmann N, Ellisman MH, , Segmentation of electron tomographic data sets using fuzzy set theory principles., J Struct Biol 2008 Jun; 162(3): 368-79.
  • 2008
    Auer M, Koster AJ, Ziese U, Bajaj C, Volkmann N, Wang da N, Hudspeth AJ, , Three-dimensional architecture of hair-bundle linkages revealed by electron-microscopic tomography., J Assoc Res Otolaryngol 2008 Jun; 9(2): 215-24.
  • 2008
    Rouiller I, Xu XP, Amann KJ, Egile C, Nickell S, Nicastro D, Li R, Pollard TD, Volkmann N, Hanein D, , The structural basis of actin filament branching by the Arp2/3 complex., J Cell Biol 2008 Mar; 180(5): 887-95.
  • 2008
    Gingras AR, Bate N, Goult BT, Hazelwood L, Canestrelli I, Grossmann JG, Liu H, Putz NS, Roberts GC, Volkmann N, Hanein D, Barsukov IL, Critchley DR, , The structure of the C-terminal actin-binding domain of talin., EMBO J 2008 Jan; 27(2): 458-69.
  • 2007
    Volkmann N, Lui H, Hazelwood L, Trybus KM, Lowey S, Hanein D, , The R403Q myosin mutation implicated in familial hypertrophic cardiomyopathy causes disorder at the actomyosin interface., PLoS One 2007 Nov; 2(11): e1123.
  • 2007
    Lowey S, Saraswat LD, Liu H, Volkmann N, Hanein D, , Evidence for an interaction between the SH3 domain and the N-terminal extension of the essential light chain in class II myosins., J Mol Biol 2007 Aug; 371(4): 902-13.
  • 2007
    Trybus KM, Gushchin MI, Lui H, Hazelwood L, Krementsova EB, Volkmann N, Hanein D, , Effect of calcium on calmodulin bound to the IQ motifs of myosin V., J Biol Chem 2007 Aug; 282(32): 23316-25.
  • 2007
    van der Heide P, Xu XP, Marsh BJ, Hanein D, Volkmann N, , Efficient automatic noise reduction of electron tomographic reconstructions based on iterative median filtering., J Struct Biol 2007 May; 158(2): 196-204.
  • 2007
    Shacham E, Sheehan B, Volkmann N, , Density-based score for selecting near-native atomic models of unknown structures., J Struct Biol 2007 May; 158(2): 188-95.
  • 2007
    Faustin B, Lartigue L, Bruey JM, Luciano F, Sergienko E, Bailly-Maitre B, Volkmann N, Hanein D, Rouiller I, Reed JC, , Reconstituted NALP1 inflammasome reveals two-step mechanism of caspase-1 activation., Mol Cell 2007 Mar; 25(5): 713-24.
  • 2006
    Craig L, Volkmann N, Arvai AS, Pique ME, Yeager M, Egelman EH, Tainer JA, , Type IV pilus structure by cryo-electron microscopy and crystallography: implications for pilus assembly and functions., Mol Cell 2006 Sep; 23(5): 651-62.
  • 2006
    Janssen ME, Kim E, Liu H, Fujimoto LM, Bobkov A, Volkmann N, Hanein D, , Three-dimensional structure of vinculin bound to actin filaments., Mol Cell 2006 Jan; 21(2): 271-81.
  • 2005
    Egile C, Rouiller I, Xu XP, Volkmann N, Li R, Hanein D, , Mechanism of filament nucleation and branch stability revealed by the structure of the Arp2/3 complex at actin branch junctions., PLoS Biol 2005 Nov; 3(11): e383.
  • 2005
    Volkmann N, Liu H, Hazelwood L, Krementsova EB, Lowey S, Trybus KM, Hanein D, , The structural basis of myosin V processive movement as revealed by electron cryomicroscopy., Mol Cell 2005 Sep; 19(5): 595-605.
  • 2005
    Martin AC, Xu XP, Rouiller I, Kaksonen M, Sun Y, Belmont L, Volkmann N, Hanein D, Welch M, Drubin DG, , Effects of Arp2 and Arp3 nucleotide-binding pocket mutations on Arp2/3 complex function., J Cell Biol 2005 Jan; 168(2): 315-28.
  • 2004
    Volkmann N, , An approach to automated particle picking from electron micrographs based on reduced representation templates., J Struct Biol ; 145(1-2): 152-6.
  • 2004
    Zhu Y, Carragher B, Glaeser RM, Fellmann D, Bajaj C, Bern M, Mouche F, de Haas F, Hall RJ, Kriegman DJ, Ludtke SJ, Mallick SP, Penczek PA, Roseman AM, Sigworth FJ, Volkmann N, Potter CS, , Automatic particle selection: results of a comparative study., J Struct Biol ; 145(1-2): 3-14.
  • 2004
    Lee HS, Bellin RM, Walker DL, Patel B, Powers P, Liu H, Garcia-Alvarez B, de Pereda JM, Liddington RC, Volkmann N, Hanein D, Critchley DR, Robson RM, , Characterization of an actin-binding site within the talin FERM domain., J Mol Biol 2004 Oct; 343(3): 771-84.
  • 2004
    Marsh BJ, Volkmann N, McIntosh JR, Howell KE, , Direct continuities between cisternae at different levels of the Golgi complex in glucose-stimulated mouse islet beta cells., Proc Natl Acad Sci U S A 2004 Apr; 101(15): 5565-70.
  • 2003
    Shin DS, Pellegrini L, Daniels DS, Yelent B, Craig L, Bates D, Yu DS, Shivji MK, Hitomi C, Arvai AS, Volkmann N, Tsuruta H, Blundell TL, Venkitaraman AR, Tainer JA, , Full-length archaeal Rad51 structure and mutants: mechanisms for RAD51 assembly and control by BRCA2., EMBO J 2003 Sep; 22(17): 4566-76.
  • 2003
    Volkmann N, Ouyang G, Trybus KM, DeRosier DJ, Lowey S, Hanein D, , Myosin isoforms show unique conformations in the actin-bound state., Proc Natl Acad Sci U S A 2003 Mar; 100(6): 3227-32.
  • 2003
    Volkmann N, Hanein D, , Docking of atomic models into reconstructions from electron microscopy., Methods Enzymol 2003 ; 374(): 204-25.
  • 2003
    Volkmann N, Hanein D, , Electron microscopy., Methods Biochem Anal 2003 ; 44(): 115-33.
  • 2002
    Wendt TG, Volkmann N, Skiniotis G, Goldie KN, Müller J, Mandelkow E, Hoenger A, , Microscopic evidence for a minus-end-directed power stroke in the kinesin motor ncd., EMBO J 2002 Nov; 21(22): 5969-78.
  • 2002
    Volkmann N, , A novel three-dimensional variant of the watershed transform for segmentation of electron density maps., J Struct Biol ; 138(1-2): 123-9.
  • 2002
    Pollard TD, Hanein D, Volkmann N, , Arp2/3 plays no role in muscle contraction., Nature 2002 Aug; 418(6901): 915.
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