GUIDE
- Left-click and drag the background to move the graph
- Left-click and drag the nodes to reorganize
- Left-click a node to view first level connections
- Double left-click a node to navigate to its page
- Double left-click the background to zoom in
- Right-click the background to zoom out
sigma.utils.pkg('sigma.canvas.nodes');
sigma.canvas.nodes.image = (function() {
var _cache = {},
_loading = {},
_callbacks = {};
// Return the renderer itself:
var renderer = function(node, context, settings) {
var args = arguments,
prefix = settings('prefix') || '',
size = node[prefix + 'size'],
color = node.color || settings('defaultNodeColor'),
url = node.url;
if (_cache[url]) {
context.save();
// Draw the clipping disc:
context.beginPath();
context.arc(
node[prefix + 'x'],
node[prefix + 'y'],
node[prefix + 'size'],
0,
Math.PI * 2,
true
);
context.closePath();
context.clip();
// Draw the image
context.drawImage(
_cache[url],
node[prefix + 'x'] - size,
node[prefix + 'y'] - size,
2 * size,
2 * size
);
// Quit the "clipping mode":
context.restore();
// Draw the border:
context.beginPath();
context.arc(
node[prefix + 'x'],
node[prefix + 'y'],
node[prefix + 'size'],
0,
Math.PI * 2,
true
);
context.lineWidth = 1;
context.strokeStyle = node.color || settings('defaultNodeColor');
context.stroke();
} else {
sigma.canvas.nodes.image.cache(url);
sigma.canvas.nodes.def.apply(
sigma.canvas.nodes,
args
);
}
};
// Let's add a public method to cache images, to make it possible to
// preload images before the initial rendering:
renderer.cache = function(url, callback) {
if (callback)
_callbacks[url] = callback;
if (_loading[url])
return;
var img = new Image();
img.onload = function() {
_loading[url] = false;
_cache[url] = img;
if (_callbacks[url]) {
_callbacks[url].call(this, img);
delete _callbacks[url];
}
};
_loading[url] = true;
img.src = url;
};
return renderer;
})();
var i,
s,
o,
offset_left = 0.5,
N = 1,
E = 40,
C = 5,
d = 0.5,
cs = [],
g = {
nodes: [],
edges: []
};
if (!sigma.classes.graph.hasMethod('neighbors')){
sigma.classes.graph.addMethod('neighbors', function(nodeId) {
var k,
neighbors = {},
index = this.allNeighborsIndex[nodeId] || {};
for (k in index)
neighbors[k] = this.nodesIndex[k];
return neighbors;
});
}
//adding the central node
g.nodes.push({
id: 8437,
label: 'Olivier Leclercq',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2019/02/research_pasteur-olivier2-150x150.jpg',
x: 0,
y: 0,
size: 30,
color: '#DDDDDD'
});
var biggest_node_size = 0;
N=8
// adding node
var x_node = Math.cos(2 * 0 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 0 * Math.PI / N) * 10;
g.nodes.push({
id: 187704,
label: 'PROJECT: ANR Texleish: Targeting host-parasite interactions through the inhibition of excreted leishmania casein kinase 1',
x: x_node,
y: y_node,
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2022/09/research_pasteur-diapositive1-150x150.png',
page_url: 'https://research.pasteur.fr/en/project/anr-texleish-targeting-host-parasite-interactions-through-the-inhibition-of-excreted-leishmania-casein-kinase-1/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 8437187704,
size: 0.5,
source: 8437,
target: 187704,
});
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4850,
label: 'Najma Rachidi',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/09/research.pasteur.fr_najma-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/najma-rachidi/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 1877044850,
size: 0.5,
source: 187704,
target: 4850 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 187634,
label: 'Sandrine Cojean',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/epartner/sandrine-cojean-2/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 187704187634,
size: 0.5,
source: 187704,
target: 187634 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 8437) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 1877048437,
size: 0.5,
source: 187704,
target: 8437 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 167431,
label: 'Sharvani Shrinivas Shintre',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2021/09/research_pasteur-sharvani-shrinivas-shintre-shintre-sharvani-photo-1-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/sharvani-shrinivas-shintre/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 187704167431,
size: 0.5,
source: 187704,
target: 167431 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 148408,
label: 'Marcela Fuentes Carias',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2020/10/research_pasteur-marcela-fuentes-carias-img-0573-150x150.jpeg',
page_url: 'https://research.pasteur.fr/en/member/marcela-fuentes-carias/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 187704148408,
size: 0.5,
source: 187704,
target: 148408 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 187687,
label: 'Fabrice Pagniez',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/epartner/fabrice-pagniez/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 187704187687,
size: 0.5,
source: 187704,
target: 187687 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 187689,
label: 'Marc-Antoine Bazin',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/epartner/marc-antoine-bazin/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 187704187689,
size: 0.5,
source: 187704,
target: 187689 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 187693,
label: 'Cédric Logé',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/epartner/cedric-loge/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 187704187693,
size: 0.5,
source: 187704,
target: 187693 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 187685,
label: 'Lhana Tisseur',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/epartner/lhana-tisseur/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 187704187685,
size: 0.5,
source: 187704,
target: 187685 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 187691,
label: 'Carine Picot',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/epartner/carine-picot/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 187704187691,
size: 0.5,
source: 187704,
target: 187691 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 187381,
label: 'Philippe Loiseau',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/epartner/philippe-loiseau/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 187704187381,
size: 0.5,
source: 187704,
target: 187381 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 187702,
label: 'Guillaume Bernadat',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/epartner/guillaume-bernadat/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 187704187702,
size: 0.5,
source: 187704,
target: 187702 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 187349,
label: 'Pascal Marchand',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/epartner/pascal-marchand/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 187704187349,
size: 0.5,
source: 187704,
target: 187349 });
// adding node
var x_node = Math.cos(2 * 1 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 1 * Math.PI / N) * 10;
g.nodes.push({
id: 187340,
label: 'PROJECT: Pasteur-Weizmann project: Role of kinases in vesicle-mediated regulation of host-pathogen interactions: Focus on Leishmania donovani and Plasmodium falciparum.',
x: x_node,
y: y_node,
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2022/09/research_pasteur-encampus-france-procope-casein-kinase-1-a-key-regulator-of-tumorigenesis-and-host-pathogen-interactions-pasteur-weizmann-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/project/pasteur-weizmann-project-role-of-kinases-in-vesicle-mediated-regulation-of-host-pathogen-interactions-focus-on-leishmania-donovani-and-plasmodium-falciparum/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 8437187340,
size: 0.5,
source: 8437,
target: 187340,
});
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 8437) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 1873408437,
size: 0.5,
source: 187340,
target: 8437 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 167431) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 187340167431,
size: 0.5,
source: 187340,
target: 167431 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 187345,
label: 'Daniel Alfandari',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/epartner/daniel-alfandari/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 187340187345,
size: 0.5,
source: 187340,
target: 187345 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4850) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 1873404850,
size: 0.5,
source: 187340,
target: 4850 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 187341,
label: 'Neta Regev-Rudzki',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/epartner/neta-regev-rudzki/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 187340187341,
size: 0.5,
source: 187340,
target: 187341 });
// adding node
var x_node = Math.cos(2 * 2 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 2 * Math.PI / N) * 10;
g.nodes.push({
id: 187195,
label: 'PROJECT: Campus France procope: CASEIN KINASE 1, A KEY REGULATOR OF TUMORIGENESIS AND HOST-PATHOGEN INTERACTIONS',
x: x_node,
y: y_node,
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2022/09/research_pasteur-encampus-france-procope-casein-kinase-1-a-key-regulator-of-tumorigenesis-and-host-pathogen-interactions-campus-france-featured-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/project/campus-france-procope-casein-kinase-1-a-key-regulator-of-tumorigenesis-and-host-pathogen-interactions/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 8437187195,
size: 0.5,
source: 8437,
target: 187195,
});
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 8437) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 1871958437,
size: 0.5,
source: 187195,
target: 8437 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 167431) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 187195167431,
size: 0.5,
source: 187195,
target: 167431 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 148408) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 187195148408,
size: 0.5,
source: 187195,
target: 148408 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 187196,
label: 'Professor Uwe Knippschild',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/epartner/professor-uwe-knippschild/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 187195187196,
size: 0.5,
source: 187195,
target: 187196 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 187198,
label: 'Adrian Gihring',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/epartner/adrian-gihring/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 187195187198,
size: 0.5,
source: 187195,
target: 187198 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 187200,
label: 'Aileen Roth',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/epartner/aileen-roth/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 187195187200,
size: 0.5,
source: 187195,
target: 187200 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4850) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 1871954850,
size: 0.5,
source: 187195,
target: 4850 });
// adding node
var x_node = Math.cos(2 * 3 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 3 * Math.PI / N) * 10;
g.nodes.push({
id: 176109,
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type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/09/research_pasteur-julien-guglielmini-last-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/julien-guglielmini/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 3692337634,
size: 0.5,
source: 36923,
target: 37634 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 7847,
label: 'Pierre Lechat',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_fig37-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/pierre-lechat/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 369237847,
size: 0.5,
source: 36923,
target: 7847 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4850) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 369234850,
size: 0.5,
source: 36923,
target: 4850 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4848) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 369234848,
size: 0.5,
source: 36923,
target: 4848 });
// adding node
var x_node = Math.cos(2 * 7 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 7 * Math.PI / N) * 10;
g.nodes.push({
id: 6209,
label: 'TEAM: Molecular Parasitology and Signaling',
x: x_node,
y: y_node,
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/05/research.pasteur.fr_molecular-parasitology-and-signaling3-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/team/molecular-parasitology-and-signaling/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 84376209,
size: 0.5,
source: 8437,
target: 6209,
});
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4850) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 62094850,
size: 0.5,
source: 6209,
target: 4850 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4847) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 62094847,
size: 0.5,
source: 6209,
target: 4847 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4849) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 62094849,
size: 0.5,
source: 6209,
target: 4849 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 7033) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 62097033,
size: 0.5,
source: 6209,
target: 7033 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 8437) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 62098437,
size: 0.5,
source: 6209,
target: 8437 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 88962,
label: 'Christel Ricard-Andraos',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2017/04/research_pasteur-christel-ricard-andraos-photo-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/christel-ricard-andraos/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 620988962,
size: 0.5,
source: 6209,
target: 88962 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 136112,
label: 'Maria Gutierrez-Sanchez',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2019/12/research_pasteur-maria-gutierrez-sanchez-fotomaria-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/maria-gutierrez-sanchez/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 6209136112,
size: 0.5,
source: 6209,
target: 136112 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 146183,
label: 'Paul Jenkins',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2020/09/research_pasteur-paul-jenkins-photo-paul-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/paul-jenkins/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 6209146183,
size: 0.5,
source: 6209,
target: 146183 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 148400,
label: 'Sheng Zhang',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2020/10/research_pasteur-sheng-zhang-photo2-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/sheng-zhang/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 6209148400,
size: 0.5,
source: 6209,
target: 148400 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 148408) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 6209148408,
size: 0.5,
source: 6209,
target: 148408 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 158222,
label: 'Isabelle Louradour',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2021/04/research_pasteur-isabelle-louradour-photo-pro-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/isabelle-louradour/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 6209158222,
size: 0.5,
source: 6209,
target: 158222 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 167431) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 6209167431,
size: 0.5,
source: 6209,
target: 167431 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 175036,
label: 'Ana Maria Murta Santi',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2022/01/research_pasteur-ana-maria-murta-santi-photo-web-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/ana-maria-murta-santi/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 6209175036,
size: 0.5,
source: 6209,
target: 175036 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 8440,
label: 'Laura Piel',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2017/05/research_pasteur-laura_photot-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/laura-piel/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 62098440,
size: 0.5,
source: 6209,
target: 8440 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 110736,
label: 'Juliana Pipoli Da Fonseca',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2018/09/research_pasteur-lecot6m-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/juliana-pipoli-da-fonseca/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 6209110736,
size: 0.5,
source: 6209,
target: 110736 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 8525,
label: 'Sylviane Etiemble',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/05/research_pasteur-sylviane-etiemble-index-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/sylviane-etiemble/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 62098525,
size: 0.5,
source: 6209,
target: 8525 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 216402) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 6209216402,
size: 0.5,
source: 6209,
target: 216402 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 226585,
label: 'Charfeddine Gharsallah',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/member/226585/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 6209226585,
size: 0.5,
source: 6209,
target: 226585 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4848) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 62094848,
size: 0.5,
source: 6209,
target: 4848 });
var s = new sigma({
//container: document.getElementById('graph-main'),
graph: g,
renderer: {
// IMPORTANT:
// This works only with the canvas renderer, so the
// renderer type set as "canvas" is necessary here.
container: document.getElementById('graph-main'),
type: 'canvas'
},
settings: {
minNodeSize: 6,
maxNodeSize: 35,
mouseWheelEnabled: false,
font: 'Montserrat',
labelThreshold:25,
borderSize:1,
defaultNodeBorderColor: '#999',
sideMargin:25,
}
});
// We first need to save the original colors of our
// nodes and edges, like this:
s.graph.nodes().forEach(function(n) {
n.originalColor = n.color;
});
s.graph.edges().forEach(function(e) {
e.originalColor = e.color;
});
// When a node is clicked, we check for each node
// if it is a neighbor of the clicked one. If not,
// we set its color as grey, and else, it takes its
// original color.
// We do the same for the edges, and we only keep
// edges that have both extremities colored.
s.bind('clickNode', function(e) {
var nodeId = e.data.node.id,
toKeep = s.graph.neighbors(nodeId);
toKeep[nodeId] = e.data.node;
s.graph.nodes().forEach(function(n) {
if (toKeep[n.id])
n.color = '#35a9f5';
else
n.color = '#dddddd';
});
s.graph.edges().forEach(function(e) {
if (toKeep[e.source] && toKeep[e.target])
e.color = '#35a9f5';
else
e.color = '#dddddd';
});
// Since the data has been modified, we need to
// call the refresh method to make the colors
// update effective.
s.refresh();
});
// When the stage is clicked, we just color each
// node and edge with its original color.
s.bind('clickStage', function(e) {
s.graph.nodes().forEach(function(n) {
n.color = n.originalColor;
});
s.graph.edges().forEach(function(e) {
e.color = e.originalColor;
});
// Same as in the previous event:
s.refresh();
});
s.bind("doubleClickNode", function (e) {
$("#canvas-wrap, .sigma-scene, .sigma-mouse").val();
ajax_load_page( e.data.node.page_url );
});
var c = s.camera;
s.bind("rightClickStage", function (e) {
sigma.misc.animation.camera(c, {
ratio: c.ratio * c.settings('zoomingRatio')
}, {
duration: 200
});
});
// Configure the noverlap layout:
var noverlapListener = s.configNoverlap({
nodeMargin: 10,
scaleNodes: 0.3,
gridSize: 1,
easing: 'quadraticInOut', // animation transition function
duration: 4000 // animation duration. Long here for the purposes of this example only
});
// Bind the events:
noverlapListener.bind('start stop interpolate', function(e) {
//console.log(e.type);
if(e.type === 'start') {
//console.time('noverlap');
}
if(e.type === 'interpolate') {
//console.timeEnd('noverlap');
}
});
// Start the layout:
s.startNoverlap();
//s.refresh();
// Initialize the dragNodes plugin:
var dragListener = sigma.plugins.dragNodes(s, s.renderers[0]);
dragListener.bind('startdrag', function(event) {
});
dragListener.bind('drag', function(event) {
});
dragListener.bind('drop', function(event) {
});
dragListener.bind('dragend', function(event) {
});