GUIDE
- Left-click and drag the background to move the graph
- Left-click and drag the nodes to reorganize
- Left-click a node to view first level connections
- Double left-click a node to navigate to its page
- Double left-click the background to zoom in
- Right-click the background to zoom out
sigma.utils.pkg('sigma.canvas.nodes');
sigma.canvas.nodes.image = (function() {
var _cache = {},
_loading = {},
_callbacks = {};
// Return the renderer itself:
var renderer = function(node, context, settings) {
var args = arguments,
prefix = settings('prefix') || '',
size = node[prefix + 'size'],
color = node.color || settings('defaultNodeColor'),
url = node.url;
if (_cache[url]) {
context.save();
// Draw the clipping disc:
context.beginPath();
context.arc(
node[prefix + 'x'],
node[prefix + 'y'],
node[prefix + 'size'],
0,
Math.PI * 2,
true
);
context.closePath();
context.clip();
// Draw the image
context.drawImage(
_cache[url],
node[prefix + 'x'] - size,
node[prefix + 'y'] - size,
2 * size,
2 * size
);
// Quit the "clipping mode":
context.restore();
// Draw the border:
context.beginPath();
context.arc(
node[prefix + 'x'],
node[prefix + 'y'],
node[prefix + 'size'],
0,
Math.PI * 2,
true
);
context.lineWidth = 1;
context.strokeStyle = node.color || settings('defaultNodeColor');
context.stroke();
} else {
sigma.canvas.nodes.image.cache(url);
sigma.canvas.nodes.def.apply(
sigma.canvas.nodes,
args
);
}
};
// Let's add a public method to cache images, to make it possible to
// preload images before the initial rendering:
renderer.cache = function(url, callback) {
if (callback)
_callbacks[url] = callback;
if (_loading[url])
return;
var img = new Image();
img.onload = function() {
_loading[url] = false;
_cache[url] = img;
if (_callbacks[url]) {
_callbacks[url].call(this, img);
delete _callbacks[url];
}
};
_loading[url] = true;
img.src = url;
};
return renderer;
})();
var i,
s,
o,
offset_left = 0.5,
N = 1,
E = 40,
C = 5,
d = 0.5,
cs = [],
g = {
nodes: [],
edges: []
};
if (!sigma.classes.graph.hasMethod('neighbors')){
sigma.classes.graph.addMethod('neighbors', function(nodeId) {
var k,
neighbors = {},
index = this.allNeighborsIndex[nodeId] || {};
for (k in index)
neighbors[k] = this.nodesIndex[k];
return neighbors;
});
}
//adding the central node
g.nodes.push({
id: 78773,
label: 'Romain Levayer',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2016/11/research.pasteur.fr_dsc_0008-001-1-1-150x150.jpg',
x: 0,
y: 0,
size: 30,
color: '#DDDDDD'
});
var biggest_node_size = 0;
N=18
// adding node
var x_node = Math.cos(2 * 0 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 0 * Math.PI / N) * 10;
g.nodes.push({
id: 188326,
label: 'EVENT: Qbio Seminar Jean-François Joanny',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/event/qbio-seminar-jean-francois-joanny/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 78773188326,
size: 0.5,
source: 78773,
target: 188326,
});
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 78773) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 18832678773,
size: 0.5,
source: 188326,
target: 78773 });
// adding node
var x_node = Math.cos(2 * 1 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 1 * Math.PI / N) * 10;
g.nodes.push({
id: 187413,
label: 'EVENT: Qbio symposium MeMoDEvo: Mechanics Morphogenesis Development and Evolution',
x: x_node,
y: y_node,
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2022/09/research_pasteur-qbio-symposium-memodevo-mechanics-morphogenesis-development-and-evolution-haeckel-phaeodaria-1-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/event/qbio-symposium-memodevo-mechanics-morphogenesis-development-and-evolution/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 78773187413,
size: 0.5,
source: 78773,
target: 187413,
});
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 78773) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 18741378773,
size: 0.5,
source: 187413,
target: 78773 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 170256,
label: 'Thibaut Brunet',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2021/11/research_pasteur-thibaut-brunet-headshot-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/thibaut-brunet/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 187413170256,
size: 0.5,
source: 187413,
target: 170256 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 3968,
label: 'Roberto Toro',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/08/research.pasteur.fr_toror-150x150.png',
page_url: 'https://research.pasteur.fr/en/member/roberto-toro/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 1874133968,
size: 0.5,
source: 187413,
target: 3968 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 187502,
label: 'Katja Heuer',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2022/09/research_pasteur-katja-heuer-katja-150x150.png',
page_url: 'https://research.pasteur.fr/en/member/katja-heuer/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 187413187502,
size: 0.5,
source: 187413,
target: 187502 });
// adding node
var x_node = Math.cos(2 * 2 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 2 * Math.PI / N) * 10;
g.nodes.push({
id: 183747,
label: 'NEWS: New publication – Microtubules depletion by effector caspases is an important rate-limiting step of extrusion',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/news/new-publication-microtubules-depletion-by-effector-caspases-is-an-important-rate-limiting-step-of-extrusion/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 78773183747,
size: 0.5,
source: 78773,
target: 183747,
});
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 90531,
label: 'Alexis Villars',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2018/01/research_pasteur-thumbnail_capture-decran-2018-01-17-a-09.34.59-e1667602357871-150x150.png',
page_url: 'https://research.pasteur.fr/en/member/alexis-villars/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 18374790531,
size: 0.5,
source: 183747,
target: 90531 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 108104,
label: 'Alexis Matamoro Vidal',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2018/05/research_pasteur-picture-150x150.png',
page_url: 'https://research.pasteur.fr/en/member/alexis-matamoro-vidal/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 183747108104,
size: 0.5,
source: 183747,
target: 108104 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 7785,
label: 'Florence Levillayer',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2017/05/research_pasteur-florence-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/florence-levillayer/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 1837477785,
size: 0.5,
source: 183747,
target: 7785 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 78773) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 18374778773,
size: 0.5,
source: 183747,
target: 78773 });
// adding node
var x_node = Math.cos(2 * 3 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 3 * Math.PI / N) * 10;
g.nodes.push({
id: 165762,
label: 'EVENT: QBIO/CANCER INITIATIVE JOINT SYMPOSIUM',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/event/qbio-cancer-initiative-joint-symposium/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 78773165762,
size: 0.5,
source: 78773,
target: 165762,
});
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4246,
label: 'Sandrine Etienne-Manneville',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/06/research.pasteur.fr_sandrine_etienne-manneville-150x150.png',
page_url: 'https://research.pasteur.fr/en/member/sandrine-etienne-manneville/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 1657624246,
size: 0.5,
source: 165762,
target: 4246 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 78773) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 16576278773,
size: 0.5,
source: 165762,
target: 78773 });
// adding node
var x_node = Math.cos(2 * 4 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 4 * Math.PI / N) * 10;
g.nodes.push({
id: 160982,
label: 'NEWS: Dying cells protect their neighbours to maintain the cohesion of our tissues',
x: x_node,
y: y_node,
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2021/06/research_pasteur-cell-death-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/news/dying-cells-protect-their-neighbours-to-maintain-the-cohesion-of-our-tissues/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 78773160982,
size: 0.5,
source: 78773,
target: 160982,
});
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 78773) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 16098278773,
size: 0.5,
source: 160982,
target: 78773 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 90349,
label: 'Léo Valon',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2017/05/research_pasteur-leo-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/leo-valon/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 16098290349,
size: 0.5,
source: 160982,
target: 90349 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 7785) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 1609827785,
size: 0.5,
source: 160982,
target: 7785 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 90531) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 16098290531,
size: 0.5,
source: 160982,
target: 90531 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 139528,
label: 'Mathilde Chouly',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2020/02/research_pasteur-img_0486-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/mathilde-chouly/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 160982139528,
size: 0.5,
source: 160982,
target: 139528 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 113863,
label: 'Fabiana Cerqueira-Campos',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2018/09/research_pasteur-photo-moi-150x150.png',
page_url: 'https://research.pasteur.fr/en/member/fabiana-cerqueira-campos/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 160982113863,
size: 0.5,
source: 160982,
target: 113863 });
// adding node
var x_node = Math.cos(2 * 5 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 5 * Math.PI / N) * 10;
g.nodes.push({
id: 149976,
label: 'EVENT: DSCB Department seminar – Dr. Yanlan Mao, University College London: « Coping with Mechanical Stress: Tissue dynamics in development and repair. »',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/event/149976/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 78773149976,
size: 0.5,
source: 78773,
target: 149976,
});
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 78773) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 14997678773,
size: 0.5,
source: 149976,
target: 78773 });
// adding node
var x_node = Math.cos(2 * 6 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 6 * Math.PI / N) * 10;
g.nodes.push({
id: 132031,
label: 'EVENT: Qbio symposium: Bridging the scales: from single cells to populations, tissues and organs.',
x: x_node,
y: y_node,
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2019/09/research_pasteur-affiche_programme_qbio_dec_2019_printreduced-2-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/event/qbio-symposium-bridging-the-scales-from-single-cells-to-populations-tissues-and-organs/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 78773132031,
size: 0.5,
source: 78773,
target: 132031,
});
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 100027,
label: 'Charles Baroud',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2017/12/research_pasteur-dsc0120-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/charles-baroud/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 132031100027,
size: 0.5,
source: 132031,
target: 100027 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 78773) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 13203178773,
size: 0.5,
source: 132031,
target: 78773 });
// adding node
var x_node = Math.cos(2 * 7 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 7 * Math.PI / N) * 10;
g.nodes.push({
id: 126627,
label: 'EVENT: Cell death and epithelial homeostasis unit seminar: « Using microfluidics for quantitative studies of post-embryonic development in C. elegans», by Wolfgang Keil, Physico-Chemistry department, Institut Curie',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/event/cell-death-and-epithelial-homeostasis-unit-seminar-using-microfluidics-for-quantitative-studies-of-post-embryonic-development-in-c-elegans-by-wolfgang-keil-physico-chemistry-departme/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 78773126627,
size: 0.5,
source: 78773,
target: 126627,
});
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 78773) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 12662778773,
size: 0.5,
source: 126627,
target: 78773 });
// adding node
var x_node = Math.cos(2 * 8 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 8 * Math.PI / N) * 10;
g.nodes.push({
id: 121797,
label: 'TEAM: UMR3738 – Developmental and Stem Cell Biology',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/team/developmental-and-stem-cell-biology/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 78773121797,
size: 0.5,
source: 78773,
target: 121797,
});
//check if content already exist
if (x_node<0){
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// adding site
g.nodes.push({
id: 50133,
label: 'Jean-Baptiste Masson',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2018/06/research_pasteur-jbm_photo_serieux_low_res-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/jean-baptiste-masson/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 7149150133,
size: 0.5,
source: 71491,
target: 50133 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4824,
label: 'François Schweisguth',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2017/05/research_pasteur-fs3-3-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/francois-schweisguth/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 714914824,
size: 0.5,
source: 71491,
target: 4824 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 2489,
label: 'David DiGregorio',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/03/david-protrait-2011-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/david-digregorio/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 714912489,
size: 0.5,
source: 71491,
target: 2489 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 75880) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 7149175880,
size: 0.5,
source: 71491,
target: 75880 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4623,
label: 'Michael Nilges',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2017/02/research.pasteur.fr_dsc3513-copy-1-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/michael-nilges/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 714914623,
size: 0.5,
source: 71491,
target: 4623 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4237,
label: 'Jost Enninga',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2016/06/research.pasteur.fr_jost2015-3-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/jost-enninga/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 714914237,
size: 0.5,
source: 71491,
target: 4237 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 51154) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 7149151154,
size: 0.5,
source: 71491,
target: 51154 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 388,
label: 'Jean-Christophe Olivo-Marin',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2018/04/research_pasteur-photojcom_2016_2-150x150.png',
page_url: 'https://research.pasteur.fr/en/member/jean-christophe-olivo-marin/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 71491388,
size: 0.5,
source: 71491,
target: 388 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4939) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 714914939,
size: 0.5,
source: 71491,
target: 4939 });
// adding node
var x_node = Math.cos(2 * 16 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 16 * Math.PI / N) * 10;
g.nodes.push({
id: 21426,
label: 'PROGRAM_PROJECT: LabEx Revive – Regenerative biology & medicine',
x: x_node,
y: y_node,
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_stem-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/program_project/revive/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 7877321426,
size: 0.5,
source: 78773,
target: 21426,
});
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4729,
label: 'Marina Caillet',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_marina-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/marina-caillet/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 214264729,
size: 0.5,
source: 21426,
target: 4729 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4876,
label: 'Shahragim Tajbakhsh',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/06/research.pasteur.fr_shahragrim-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/shahragim-tajbakhsh/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 214264876,
size: 0.5,
source: 21426,
target: 4876 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4824) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 214264824,
size: 0.5,
source: 21426,
target: 4824 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 24000,
label: 'Philippe Menasché',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_fig112-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/?post_type=epartner&p=24000',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 2142624000,
size: 0.5,
source: 21426,
target: 24000 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 23997,
label: 'Cécile Martinat',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_fig111-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/?post_type=epartner&p=23997',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 2142623997,
size: 0.5,
source: 21426,
target: 23997 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 24018,
label: 'Raphael Scharfmann',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research_pasteur-raphael-scharfmann-rscharfmann-150x150.png',
page_url: 'https://research.pasteur.fr/en/?post_type=epartner&p=24018',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 2142624018,
size: 0.5,
source: 21426,
target: 24018 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 24009,
label: 'Fréderic Relaix',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_fig115-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/?post_type=epartner&p=24009',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 2142624009,
size: 0.5,
source: 21426,
target: 24009 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4606,
label: 'Pablo Navarro Gil',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2019/10/research_pasteur-institut-pasteur_portraits-studio_gcc_162-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/pablo-navarro-gil/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 214264606,
size: 0.5,
source: 21426,
target: 4606 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 64150) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 2142664150,
size: 0.5,
source: 21426,
target: 64150 });
// adding node
var x_node = Math.cos(2 * 17 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 17 * Math.PI / N) * 10;
g.nodes.push({
id: 20,
label: 'DEPARTMENT: Developmental and Stem Cell Biology',
x: x_node,
y: y_node,
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2014/09/research_pasteur-developmental-stem-cell-biology-bandeau-dpt-bdcs-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/department/developmental-stem-cell-biology/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 7877320,
size: 0.5,
source: 78773,
target: 20,
});
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 155052,
label: 'Guillaume Frasca',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2021/03/research_pasteur-guillaume-frasca-gf-e1614787961122-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/guillaume-frasca/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 20155052,
size: 0.5,
source: 20,
target: 155052 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 105747,
label: 'Doriane Thouvenot',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/member/doriane-thouvenot/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 20105747,
size: 0.5,
source: 20,
target: 105747 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 64150) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 2064150,
size: 0.5,
source: 20,
target: 64150 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4553,
label: 'Sigolène Meilhac',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/06/research.pasteur.fr_meilhac-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/sigolene-meilhac/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 204553,
size: 0.5,
source: 20,
target: 4553 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 78773) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 2078773,
size: 0.5,
source: 20,
target: 78773 });
var s = new sigma({
//container: document.getElementById('graph-main'),
graph: g,
renderer: {
// IMPORTANT:
// This works only with the canvas renderer, so the
// renderer type set as "canvas" is necessary here.
container: document.getElementById('graph-main'),
type: 'canvas'
},
settings: {
minNodeSize: 6,
maxNodeSize: 35,
mouseWheelEnabled: false,
font: 'Montserrat',
labelThreshold:25,
borderSize:1,
defaultNodeBorderColor: '#999',
sideMargin:25,
}
});
// We first need to save the original colors of our
// nodes and edges, like this:
s.graph.nodes().forEach(function(n) {
n.originalColor = n.color;
});
s.graph.edges().forEach(function(e) {
e.originalColor = e.color;
});
// When a node is clicked, we check for each node
// if it is a neighbor of the clicked one. If not,
// we set its color as grey, and else, it takes its
// original color.
// We do the same for the edges, and we only keep
// edges that have both extremities colored.
s.bind('clickNode', function(e) {
var nodeId = e.data.node.id,
toKeep = s.graph.neighbors(nodeId);
toKeep[nodeId] = e.data.node;
s.graph.nodes().forEach(function(n) {
if (toKeep[n.id])
n.color = '#35a9f5';
else
n.color = '#dddddd';
});
s.graph.edges().forEach(function(e) {
if (toKeep[e.source] && toKeep[e.target])
e.color = '#35a9f5';
else
e.color = '#dddddd';
});
// Since the data has been modified, we need to
// call the refresh method to make the colors
// update effective.
s.refresh();
});
// When the stage is clicked, we just color each
// node and edge with its original color.
s.bind('clickStage', function(e) {
s.graph.nodes().forEach(function(n) {
n.color = n.originalColor;
});
s.graph.edges().forEach(function(e) {
e.color = e.originalColor;
});
// Same as in the previous event:
s.refresh();
});
s.bind("doubleClickNode", function (e) {
$("#canvas-wrap, .sigma-scene, .sigma-mouse").val();
ajax_load_page( e.data.node.page_url );
});
var c = s.camera;
s.bind("rightClickStage", function (e) {
sigma.misc.animation.camera(c, {
ratio: c.ratio * c.settings('zoomingRatio')
}, {
duration: 200
});
});
// Configure the noverlap layout:
var noverlapListener = s.configNoverlap({
nodeMargin: 10,
scaleNodes: 0.3,
gridSize: 1,
easing: 'quadraticInOut', // animation transition function
duration: 4000 // animation duration. Long here for the purposes of this example only
});
// Bind the events:
noverlapListener.bind('start stop interpolate', function(e) {
//console.log(e.type);
if(e.type === 'start') {
//console.time('noverlap');
}
if(e.type === 'interpolate') {
//console.timeEnd('noverlap');
}
});
// Start the layout:
s.startNoverlap();
//s.refresh();
// Initialize the dragNodes plugin:
var dragListener = sigma.plugins.dragNodes(s, s.renderers[0]);
dragListener.bind('startdrag', function(event) {
});
dragListener.bind('drag', function(event) {
});
dragListener.bind('drop', function(event) {
});
dragListener.bind('dragend', function(event) {
});