GUIDE
- Left-click and drag the background to move the graph
- Left-click and drag the nodes to reorganize
- Left-click a node to view first level connections
- Double left-click a node to navigate to its page
- Double left-click the background to zoom in
- Right-click the background to zoom out
sigma.utils.pkg('sigma.canvas.nodes');
sigma.canvas.nodes.image = (function() {
var _cache = {},
_loading = {},
_callbacks = {};
// Return the renderer itself:
var renderer = function(node, context, settings) {
var args = arguments,
prefix = settings('prefix') || '',
size = node[prefix + 'size'],
color = node.color || settings('defaultNodeColor'),
url = node.url;
if (_cache[url]) {
context.save();
// Draw the clipping disc:
context.beginPath();
context.arc(
node[prefix + 'x'],
node[prefix + 'y'],
node[prefix + 'size'],
0,
Math.PI * 2,
true
);
context.closePath();
context.clip();
// Draw the image
context.drawImage(
_cache[url],
node[prefix + 'x'] - size,
node[prefix + 'y'] - size,
2 * size,
2 * size
);
// Quit the "clipping mode":
context.restore();
// Draw the border:
context.beginPath();
context.arc(
node[prefix + 'x'],
node[prefix + 'y'],
node[prefix + 'size'],
0,
Math.PI * 2,
true
);
context.lineWidth = 1;
context.strokeStyle = node.color || settings('defaultNodeColor');
context.stroke();
} else {
sigma.canvas.nodes.image.cache(url);
sigma.canvas.nodes.def.apply(
sigma.canvas.nodes,
args
);
}
};
// Let's add a public method to cache images, to make it possible to
// preload images before the initial rendering:
renderer.cache = function(url, callback) {
if (callback)
_callbacks[url] = callback;
if (_loading[url])
return;
var img = new Image();
img.onload = function() {
_loading[url] = false;
_cache[url] = img;
if (_callbacks[url]) {
_callbacks[url].call(this, img);
delete _callbacks[url];
}
};
_loading[url] = true;
img.src = url;
};
return renderer;
})();
var i,
s,
o,
offset_left = 0.5,
N = 1,
E = 40,
C = 5,
d = 0.5,
cs = [],
g = {
nodes: [],
edges: []
};
if (!sigma.classes.graph.hasMethod('neighbors')){
sigma.classes.graph.addMethod('neighbors', function(nodeId) {
var k,
neighbors = {},
index = this.allNeighborsIndex[nodeId] || {};
for (k in index)
neighbors[k] = this.nodesIndex[k];
return neighbors;
});
}
//adding the central node
g.nodes.push({
id: 7732,
label: 'Valérie Lorin',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_val-150x150.jpg',
x: 0,
y: 0,
size: 30,
color: '#DDDDDD'
});
var biggest_node_size = 0;
N=9
// adding node
var x_node = Math.cos(2 * 0 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 0 * Math.PI / N) * 10;
g.nodes.push({
id: 179305,
label: 'NEWS: New publication – Epitope convergence of broadly HIV-1 neutralizing IgA and IgG antibody lineages in a viremic controller',
x: x_node,
y: y_node,
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2022/04/research_pasteur-new-publication-epitope-convergence-of-broadly-hiv-1-neutralizing-iga-and-igg-antibody-lineages-in-a-viremic-controller-bnabs-hiv-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/news/new-publication-epitope-convergence-of-broadly-hiv-1-neutralizing-iga-and-igg-antibody-lineages-in-a-viremic-controller/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 7732179305,
size: 0.5,
source: 7732,
target: 179305,
});
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 7732) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 1793057732,
size: 0.5,
source: 179305,
target: 7732 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 116577,
label: 'Ignacio Fernandez',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2018/11/research_pasteur-img_4481-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/fr-ignacio-fernandez/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 179305116577,
size: 0.5,
source: 179305,
target: 116577 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4184,
label: 'Guillemette Masse-Ranson',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_ha3-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/guillemette-masse-ranson/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 1793054184,
size: 0.5,
source: 179305,
target: 4184 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 93674,
label: 'Luis Molinos-Albert',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2017/08/research_pasteur-img-20170808-wa0010-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/luis-molinos-albert/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 17930593674,
size: 0.5,
source: 179305,
target: 93674 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 83681,
label: 'Cyril Planchais',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2017/01/research.pasteur.fr_cyril-1-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/cyril-planchais/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 17930583681,
size: 0.5,
source: 179305,
target: 83681 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4578,
label: 'Thierry Hieu',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_thierry1-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/thierry-hieu/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 1793054578,
size: 0.5,
source: 179305,
target: 4578 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 1559,
label: 'Gérard Pehau-Arnaudet',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2020/04/research_pasteur-gpa-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/gerard-pehau-arnaudet/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 1793051559,
size: 0.5,
source: 179305,
target: 1559 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 135613,
label: 'Giulia Girelli-Zubani',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/member/giulia-girelli-zubani/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 179305135613,
size: 0.5,
source: 179305,
target: 135613 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 175155,
label: 'Oriane Fiquet',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/member/oriane-fiquet/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 179305175155,
size: 0.5,
source: 179305,
target: 175155 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 21458,
label: 'Florence Guivel',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2018/01/research_pasteur-flo-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/florence-guivel/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 17930521458,
size: 0.5,
source: 179305,
target: 21458 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4821,
label: 'Olivier Schwartz',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/09/research.pasteur.fr_photo-o.schwartz-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/olivier-schwartz/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 1793054821,
size: 0.5,
source: 179305,
target: 4821 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 8619,
label: 'François Bontems',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_francois_bontems-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/francois-bontems/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 1793058619,
size: 0.5,
source: 179305,
target: 8619 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4180,
label: 'James Di Santo',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2016/05/research.pasteur.fr_photojd-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/james-di-santo/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 1793054180,
size: 0.5,
source: 179305,
target: 4180 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4724,
label: 'Félix A. Rey',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/05/research_pasteur-enfelix-a-reyfrfelix-rey-portrait-felixrey-1-150x150.jpeg',
page_url: 'https://research.pasteur.fr/en/member/felix-rey/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 1793054724,
size: 0.5,
source: 179305,
target: 4724 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4575,
label: 'Hugo Mouquet',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2019/05/research_pasteur-mouquet_id-150x150.png',
page_url: 'https://research.pasteur.fr/en/member/hugo-mouquet/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 1793054575,
size: 0.5,
source: 179305,
target: 4575 });
// adding node
var x_node = Math.cos(2 * 1 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 1 * Math.PI / N) * 10;
g.nodes.push({
id: 157425,
label: 'PROJECT: Antibody memory B-cell response to Chikungunya virus',
x: x_node,
y: y_node,
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2021/04/research_pasteur-research.pasteur.fr-figura6-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/project/antibody-memory-b-cell-response-to-chikungunya-virus/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 7732157425,
size: 0.5,
source: 7732,
target: 157425,
});
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4577,
label: '',
type: 'image',
url: '',
page_url: '',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 1574254577,
size: 0.5,
source: 157425,
target: 4577 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 7732) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 1574257732,
size: 0.5,
source: 157425,
target: 7732 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4575) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 1574254575,
size: 0.5,
source: 157425,
target: 4575 });
// adding node
var x_node = Math.cos(2 * 2 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 2 * Math.PI / N) * 10;
g.nodes.push({
id: 66174,
label: 'NEWS: Antibodies capable of eliminating HIV-infected cells',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/news/antibodies-capable-of-eliminating-hiv-infected-cells/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 773266174,
size: 0.5,
source: 7732,
target: 66174,
});
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4817,
label: 'Timothée Bruel',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2017/09/research_pasteur-photo2-1-150x150.png',
page_url: 'https://research.pasteur.fr/en/member/timothee-bruel/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 661744817,
size: 0.5,
source: 66174,
target: 4817 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4821) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 661744821,
size: 0.5,
source: 66174,
target: 4821 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 8623,
label: '',
type: 'image',
url: '',
page_url: '',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 661748623,
size: 0.5,
source: 66174,
target: 8623 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4575) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 661744575,
size: 0.5,
source: 66174,
target: 4575 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 58565,
label: 'Sonia Amraoui',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2017/06/research_pasteur-689687-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/sonia-amraoui/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 6617458565,
size: 0.5,
source: 66174,
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}
// adding site
g.nodes.push({
id: 4926,
label: 'Caroline Demeret',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/09/research.pasteur.fr_dscn7482-copie-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/caroline-demeret/',
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y: y_site,
size: 10,
color: '#dddddd'
});
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//check if content already exist
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// adding site
g.nodes.push({
id: 4922,
label: 'Sandie Munier',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_sandiemunier-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/sandie-munier/',
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y: y_site,
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//check if content already exist
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// adding site
g.nodes.push({
id: 4935,
label: 'Bernadette Crescenzo',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/09/research.pasteur.fr_sans-titre-150x150.png',
page_url: 'https://research.pasteur.fr/en/member/bernadette-crescenzo/',
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y: y_site,
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//check if content already exist
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// adding site
g.nodes.push({
id: 4934,
label: 'Patricia Cassonnet',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/09/research.pasteur.fr_rimg4902-original-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/patricia-cassonnet/',
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y: y_site,
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// adding site
g.nodes.push({
id: 4929,
label: 'Annette Martin',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_annettemartin-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/annette-martin/',
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y: y_site,
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color: '#dddddd'
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// adding site
g.nodes.push({
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label: 'Marion Barbet',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/member/marion-barbet/',
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y: y_site,
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//check if content already exist
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// adding site
g.nodes.push({
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label: 'Martine Vandaele',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/member/martine-vandaele/',
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y: y_site,
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// adding site
g.nodes.push({
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label: 'Emeline Simon',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2017/11/research_pasteur-emeline-simon-sans-titre-2-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/emeline-simon/',
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y: y_site,
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color: '#dddddd'
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//check if content already exist
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// adding site
g.nodes.push({
id: 48965,
label: 'Damien Batalie',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/09/research.pasteur.fr_damien-batalie-site-web1-150x150.jpeg',
page_url: 'https://research.pasteur.fr/en/member/fr-damien-batalie/',
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y: y_site,
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color: '#dddddd'
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//check if content already exist
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// adding site
g.nodes.push({
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label: 'Yannis Rahou',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2018/01/research_pasteur-photo-de-moi-2-150x150.png',
page_url: 'https://research.pasteur.fr/en/member/yannis-rahou/',
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y: y_site,
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color: '#dddddd'
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//link to content
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//check if content already exist
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// adding site
g.nodes.push({
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label: 'Flora DONATI',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/member/flora-donati/',
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y: y_site,
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color: '#dddddd'
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//check if content already exist
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// adding site
g.nodes.push({
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label: 'Houda TABBAL',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/member/houda-tabbal/',
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y: y_site,
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color: '#dddddd'
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// adding site
g.nodes.push({
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label: 'Anastasia V. Komarova',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/09/research.pasteur.fr_ak-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/anastasia-komarova/',
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y: y_site,
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color: '#dddddd'
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//link to content
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//check if content already exist
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// adding site
g.nodes.push({
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label: 'Valentin Ozeel',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/member/valentin-ozeel/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
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//link to content
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//check if content already exist
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// adding site
g.nodes.push({
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label: 'Valérie Granata',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/member/valerie-granata/',
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y: y_site,
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color: '#dddddd'
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//link to content
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//check if content already exist
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// adding site
g.nodes.push({
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label: 'Mikaël Attia',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/member/mikael-attia/',
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y: y_site,
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color: '#dddddd'
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//link to content
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//check if content already exist
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// adding site
g.nodes.push({
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label: 'Faustine Amara',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/member/faustine-amara/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
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//link to content
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//check if content already exist
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// adding site
g.nodes.push({
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label: 'Guillaume Dugied',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/member/guillaume-dugied/',
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y: y_site,
size: 10,
color: '#dddddd'
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//link to content
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target: 156779 });
//check if content already exist
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// adding site
g.nodes.push({
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label: 'Angeliki-Anna Beka',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/member/angeliki-anna-beka/',
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y: y_site,
size: 10,
color: '#dddddd'
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//link to content
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//check if content already exist
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// adding site
g.nodes.push({
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label: 'Melanie Dos Santos',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2019/07/research_pasteur-photo-identite-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/melanie-dos-santos/',
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y: y_site,
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color: '#dddddd'
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//link to content
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// adding site
g.nodes.push({
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label: 'Sinem Caglar',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/member/sinem-caglar/',
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y: y_site,
size: 10,
color: '#dddddd'
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//link to content
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//check if content already exist
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// adding site
g.nodes.push({
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label: 'Chloé Sturmach',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/member/chloe-sturmach/',
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y: y_site,
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color: '#dddddd'
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//check if content already exist
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// adding site
g.nodes.push({
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label: 'Mariem Znaidia',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/member/mariem-znaidia/',
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color: '#dddddd'
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//check if content already exist
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// adding site
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label: 'Léa Avon',
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page_url: 'https://research.pasteur.fr/en/member/lea-avon/',
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//check if content already exist
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// adding site
g.nodes.push({
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label: 'Marine Bernard',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/member/fr-marine-bernard/',
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color: '#dddddd'
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//link to content
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// adding site
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label: 'Angela Brisebarre',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/member/angela-brisebarre/',
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y: y_site,
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// adding site
g.nodes.push({
id: 83942,
label: 'Océane Dehan',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/member/oceane-dehan/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 621483942,
size: 0.5,
source: 6214,
target: 83942 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 191181,
label: 'Artémis Matrakis',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/member/artemis-matrakis/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 6214191181,
size: 0.5,
source: 6214,
target: 191181 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4920,
label: 'Sylvie van Der Werf',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2017/07/research_pasteur-photo_sylvie-vdw1-150x150.png',
page_url: 'https://research.pasteur.fr/en/member/sylvie-van-der-werf/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 62144920,
size: 0.5,
source: 6214,
target: 4920 });
var s = new sigma({
//container: document.getElementById('graph-main'),
graph: g,
renderer: {
// IMPORTANT:
// This works only with the canvas renderer, so the
// renderer type set as "canvas" is necessary here.
container: document.getElementById('graph-main'),
type: 'canvas'
},
settings: {
minNodeSize: 6,
maxNodeSize: 35,
mouseWheelEnabled: false,
font: 'Montserrat',
labelThreshold:25,
borderSize:1,
defaultNodeBorderColor: '#999',
sideMargin:25,
}
});
// We first need to save the original colors of our
// nodes and edges, like this:
s.graph.nodes().forEach(function(n) {
n.originalColor = n.color;
});
s.graph.edges().forEach(function(e) {
e.originalColor = e.color;
});
// When a node is clicked, we check for each node
// if it is a neighbor of the clicked one. If not,
// we set its color as grey, and else, it takes its
// original color.
// We do the same for the edges, and we only keep
// edges that have both extremities colored.
s.bind('clickNode', function(e) {
var nodeId = e.data.node.id,
toKeep = s.graph.neighbors(nodeId);
toKeep[nodeId] = e.data.node;
s.graph.nodes().forEach(function(n) {
if (toKeep[n.id])
n.color = '#35a9f5';
else
n.color = '#dddddd';
});
s.graph.edges().forEach(function(e) {
if (toKeep[e.source] && toKeep[e.target])
e.color = '#35a9f5';
else
e.color = '#dddddd';
});
// Since the data has been modified, we need to
// call the refresh method to make the colors
// update effective.
s.refresh();
});
// When the stage is clicked, we just color each
// node and edge with its original color.
s.bind('clickStage', function(e) {
s.graph.nodes().forEach(function(n) {
n.color = n.originalColor;
});
s.graph.edges().forEach(function(e) {
e.color = e.originalColor;
});
// Same as in the previous event:
s.refresh();
});
s.bind("doubleClickNode", function (e) {
$("#canvas-wrap, .sigma-scene, .sigma-mouse").val();
ajax_load_page( e.data.node.page_url );
});
var c = s.camera;
s.bind("rightClickStage", function (e) {
sigma.misc.animation.camera(c, {
ratio: c.ratio * c.settings('zoomingRatio')
}, {
duration: 200
});
});
// Configure the noverlap layout:
var noverlapListener = s.configNoverlap({
nodeMargin: 10,
scaleNodes: 0.3,
gridSize: 1,
easing: 'quadraticInOut', // animation transition function
duration: 4000 // animation duration. Long here for the purposes of this example only
});
// Bind the events:
noverlapListener.bind('start stop interpolate', function(e) {
//console.log(e.type);
if(e.type === 'start') {
//console.time('noverlap');
}
if(e.type === 'interpolate') {
//console.timeEnd('noverlap');
}
});
// Start the layout:
s.startNoverlap();
//s.refresh();
// Initialize the dragNodes plugin:
var dragListener = sigma.plugins.dragNodes(s, s.renderers[0]);
dragListener.bind('startdrag', function(event) {
});
dragListener.bind('drag', function(event) {
});
dragListener.bind('drop', function(event) {
});
dragListener.bind('dragend', function(event) {
});