GUIDE
- Left-click and drag the background to move the graph
- Left-click and drag the nodes to reorganize
- Left-click a node to view first level connections
- Double left-click a node to navigate to its page
- Double left-click the background to zoom in
- Right-click the background to zoom out
sigma.utils.pkg('sigma.canvas.nodes');
sigma.canvas.nodes.image = (function() {
var _cache = {},
_loading = {},
_callbacks = {};
// Return the renderer itself:
var renderer = function(node, context, settings) {
var args = arguments,
prefix = settings('prefix') || '',
size = node[prefix + 'size'],
color = node.color || settings('defaultNodeColor'),
url = node.url;
if (_cache[url]) {
context.save();
// Draw the clipping disc:
context.beginPath();
context.arc(
node[prefix + 'x'],
node[prefix + 'y'],
node[prefix + 'size'],
0,
Math.PI * 2,
true
);
context.closePath();
context.clip();
// Draw the image
context.drawImage(
_cache[url],
node[prefix + 'x'] - size,
node[prefix + 'y'] - size,
2 * size,
2 * size
);
// Quit the "clipping mode":
context.restore();
// Draw the border:
context.beginPath();
context.arc(
node[prefix + 'x'],
node[prefix + 'y'],
node[prefix + 'size'],
0,
Math.PI * 2,
true
);
context.lineWidth = 1;
context.strokeStyle = node.color || settings('defaultNodeColor');
context.stroke();
} else {
sigma.canvas.nodes.image.cache(url);
sigma.canvas.nodes.def.apply(
sigma.canvas.nodes,
args
);
}
};
// Let's add a public method to cache images, to make it possible to
// preload images before the initial rendering:
renderer.cache = function(url, callback) {
if (callback)
_callbacks[url] = callback;
if (_loading[url])
return;
var img = new Image();
img.onload = function() {
_loading[url] = false;
_cache[url] = img;
if (_callbacks[url]) {
_callbacks[url].call(this, img);
delete _callbacks[url];
}
};
_loading[url] = true;
img.src = url;
};
return renderer;
})();
var i,
s,
o,
offset_left = 0.5,
N = 1,
E = 40,
C = 5,
d = 0.5,
cs = [],
g = {
nodes: [],
edges: []
};
if (!sigma.classes.graph.hasMethod('neighbors')){
sigma.classes.graph.addMethod('neighbors', function(nodeId) {
var k,
neighbors = {},
index = this.allNeighborsIndex[nodeId] || {};
for (k in index)
neighbors[k] = this.nodesIndex[k];
return neighbors;
});
}
//adding the central node
g.nodes.push({
id: 6834,
label: 'Samy Gobaa',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/05/research_pasteur-samy-gobaa-gobaa-samy-1510-e1634550888980-150x150.jpg',
x: 0,
y: 0,
size: 30,
color: '#DDDDDD'
});
var biggest_node_size = 0;
N=23
// adding node
var x_node = Math.cos(2 * 0 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 0 * Math.PI / N) * 10;
g.nodes.push({
id: 234567,
label: 'PROJECT: Development of a lymphoid organ-on-chip',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/project/development-of-a-lymphoid-organ-on-chip/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 6834234567,
size: 0.5,
source: 6834,
target: 234567,
});
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 223617,
label: 'Hippolyte Debarnot',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/member/hippolyte-debarnot/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 234567223617,
size: 0.5,
source: 234567,
target: 223617 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 6834) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 2345676834,
size: 0.5,
source: 234567,
target: 6834 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 3931,
label: 'Lisa Chakrabarti',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2016/11/research.pasteur.fr_lc2-photo-medium-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/lisa-chakrabarti/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 2345673931,
size: 0.5,
source: 234567,
target: 3931 });
// adding node
var x_node = Math.cos(2 * 1 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 1 * Math.PI / N) * 10;
g.nodes.push({
id: 233776,
label: 'EVENT: 2nd EPFL-Institut Pasteur Symposium in Paris on December 5, 2024',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/event/2nd-epfl-institut-pasteur-symposium-in-paris-on-december-4-5-2024/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 6834233776,
size: 0.5,
source: 6834,
target: 233776,
});
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4623,
label: 'Michael Nilges',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2017/02/research.pasteur.fr_dsc3513-copy-1-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/michael-nilges/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 2337764623,
size: 0.5,
source: 233776,
target: 4623 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 144602,
label: 'Céline Dormoy',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2020/07/research_pasteur-enceline-dormoyfrceline-dormoy-img-20210727-110618-1-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/fr-celine-dormoy/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 233776144602,
size: 0.5,
source: 233776,
target: 144602 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 8391,
label: 'Natacha Haikine',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_haikine-150x150.jpeg',
page_url: 'https://research.pasteur.fr/en/member/natacha-haikine/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 2337768391,
size: 0.5,
source: 233776,
target: 8391 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 6834) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 2337766834,
size: 0.5,
source: 233776,
target: 6834 });
// adding node
var x_node = Math.cos(2 * 2 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 2 * Math.PI / N) * 10;
g.nodes.push({
id: 194940,
label: 'NEWS: New publication – In vitro cellular reprogramming to model gonad development and its disorders',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/news/new-publication-in-vitro-cellular-reprogramming-to-model-gonad-development-and-its-disorders/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 6834194940,
size: 0.5,
source: 6834,
target: 194940,
});
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 139712,
label: 'Almira Chervova',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2020/02/research_pasteur-capture-decran-2020-02-21-a-16.49.52-150x150.png',
page_url: 'https://research.pasteur.fr/en/member/fr-almira-chervova/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 194940139712,
size: 0.5,
source: 194940,
target: 139712 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 951,
label: 'Emmanuel Frachon',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/02/research_pasteur-emmanuel-frachon-perso2021-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/emmanuel-frachon/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 194940951,
size: 0.5,
source: 194940,
target: 951 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 7854,
label: 'Pierre-Henri Commere',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/member/pierre-henri-commere/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 1949407854,
size: 0.5,
source: 194940,
target: 7854 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 90349,
label: 'Léo Valon',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2017/05/research_pasteur-leo-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/leo-valon/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 19494090349,
size: 0.5,
source: 194940,
target: 90349 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 6834) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 1949406834,
size: 0.5,
source: 194940,
target: 6834 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4551,
label: 'Kenneth McElreavey',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_fig44-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/kenneth-mcelreavey/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 1949404551,
size: 0.5,
source: 194940,
target: 4551 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4547,
label: 'Anu Bashamboo',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_fig62-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/anu-bashamboo/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 1949404547,
size: 0.5,
source: 194940,
target: 4547 });
// adding node
var x_node = Math.cos(2 * 3 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 3 * Math.PI / N) * 10;
g.nodes.push({
id: 186948,
label: 'EVENT: Joint Seminar Dept Microbiology & Biomaterials And Microfluidics Core Facility',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/event/joint-seminar-dept-microbiology-biomaterials-and-microfluidics-core-facility/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 6834186948,
size: 0.5,
source: 6834,
target: 186948,
});
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 7209,
label: 'Philippe Glaser',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_ha41-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/philippe-glaser/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 1869487209,
size: 0.5,
source: 186948,
target: 7209 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 6834) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 1869486834,
size: 0.5,
source: 186948,
target: 6834 });
// adding node
var x_node = Math.cos(2 * 4 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 4 * Math.PI / N) * 10;
g.nodes.push({
id: 180109,
label: 'EVENT: Microphysiological models of tissue barriers: new tools for infection biology',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/event/microphysiological-models-of-tissue-barriers-new-tools-for-infection-biology/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 6834180109,
size: 0.5,
source: 6834,
target: 180109,
});
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 6834) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 1801096834,
size: 0.5,
source: 180109,
target: 6834 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 124775,
label: 'Héloïse Mary',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/?post_type=member&p=124775',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 180109124775,
size: 0.5,
source: 180109,
target: 124775 });
// adding node
var x_node = Math.cos(2 * 5 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 5 * Math.PI / N) * 10;
g.nodes.push({
id: 152818,
label: 'PROJECT: Call Emulate 2020 – Mucibiome – Impact of the colon mucus layer colonized by microbiota on the colonic epithelium mechanics under strech and on the pathogenesis of Entamoeba histolytica',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/project/call-emulate-2020-mucibiome-impact-of-the-colon-mucus-layer-colonized-by-microbiota-on-the-colonic-epithelium-mechanics-under-strech-and-on-the-pathogenesis-of-entamoeba-histolytica/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 6834152818,
size: 0.5,
source: 6834,
target: 152818,
});
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 8199,
label: 'Maria Manich',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/05/research_pasteur-maria-manich-image1-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/maria-manich/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 1528188199,
size: 0.5,
source: 152818,
target: 8199 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4778,
label: 'Giulia Nigro',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_nigro-150x150.jpeg',
page_url: 'https://research.pasteur.fr/en/member/giulia-nigro/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 1528184778,
size: 0.5,
source: 152818,
target: 4778 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 124775) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 152818124775,
size: 0.5,
source: 152818,
target: 124775 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 6834) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 1528186834,
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x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 8458,
label: 'Valérie Malarde',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_malarde-150x150.jpeg',
page_url: 'https://research.pasteur.fr/en/member/valerie-malarde/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 790778458,
size: 0.5,
source: 79077,
target: 8458 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 193792,
label: 'Remigiusz Walocha',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2023/05/research_pasteur-e9587e63-61ed-4bad-8e54-1ebe41dcfd07-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/remigiusz-walocha/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 79077193792,
size: 0.5,
source: 79077,
target: 193792 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 199718,
label: 'Matthieu Gélin',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2023/04/research_pasteur-mugshot-square-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/matthieu-gelin/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 79077199718,
size: 0.5,
source: 79077,
target: 199718 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 217235,
label: 'Khadija Oukacha',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2024/01/research_pasteur-oukacha-khadija-3-e1705660891593-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/khadija-oukacha/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 79077217235,
size: 0.5,
source: 79077,
target: 217235 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 219019,
label: 'Raphaelle Liquard',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2024/01/research_pasteur-1705656379072-e1705669444211-150x150.jpeg',
page_url: 'https://research.pasteur.fr/en/member/raphaelle-liquard__trashed/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 79077219019,
size: 0.5,
source: 79077,
target: 219019 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 220173,
label: 'Pol López Pérez',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/member/pol-lopez-perez/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 79077220173,
size: 0.5,
source: 79077,
target: 220173 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 231515,
label: 'Sophie Oatley',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/member/sophie-oatley/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 79077231515,
size: 0.5,
source: 79077,
target: 231515 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 6834) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 790776834,
size: 0.5,
source: 79077,
target: 6834 });
// adding node
var x_node = Math.cos(2 * 20 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 20 * Math.PI / N) * 10;
g.nodes.push({
id: 78595,
label: 'EVENT: Microfluidic Large-Scale Integration Applied to Molecular Diagnostics. Prof. Sebastian MAERKL (EPFL)',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/event/microfluidic-large-scale-integration-applied-to-molecular-diagnostics-prof-sebastian-maerkl-epfl/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 683478595,
size: 0.5,
source: 6834,
target: 78595,
});
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 6834) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 785956834,
size: 0.5,
source: 78595,
target: 6834 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 6368,
label: 'Giulia Manina',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/05/research_pasteur-giulia-manina-giulia-manina-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/giulia-manina/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 785956368,
size: 0.5,
source: 78595,
target: 6368 });
// adding node
var x_node = Math.cos(2 * 21 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 21 * Math.PI / N) * 10;
g.nodes.push({
id: 55765,
label: 'EVENT: Microfluidics, Pizza and Beer First Seminar.',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/event/microfluidics-pizza-and-beer-first-seminar/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 683455765,
size: 0.5,
source: 6834,
target: 55765,
});
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 6834) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 557656834,
size: 0.5,
source: 55765,
target: 6834 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4788) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 557654788,
size: 0.5,
source: 55765,
target: 4788 });
// adding node
var x_node = Math.cos(2 * 22 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 22 * Math.PI / N) * 10;
g.nodes.push({
id: 55721,
label: 'PROJECT: Microfluidics@Pasteur',
x: x_node,
y: y_node,
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2016/02/research.pasteur.fr_flyer-pizza-mf-second-seminar-feb-2016-150x150.png',
page_url: 'https://research.pasteur.fr/en/project/microfluidicspasteur/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 683455721,
size: 0.5,
source: 6834,
target: 55721,
});
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 2504,
label: 'Pierre Bruhns',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2019/12/research_pasteur-pierre-bruhns-nb-zoomed-in-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/pierre-bruhns/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 557212504,
size: 0.5,
source: 55721,
target: 2504 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4002,
label: '',
type: 'image',
url: '',
page_url: '',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 557214002,
size: 0.5,
source: 55721,
target: 4002 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4094) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 557214094,
size: 0.5,
source: 55721,
target: 4094 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 6837,
label: 'Elodie Brient-Litzler',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2019/05/research_pasteur-photoebl2019-1-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/elodie-brient-litzler/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 557216837,
size: 0.5,
source: 55721,
target: 6837 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 388,
label: 'Jean-Christophe Olivo-Marin',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2018/04/research_pasteur-photojcom_2016_2-150x150.png',
page_url: 'https://research.pasteur.fr/en/member/jean-christophe-olivo-marin/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 55721388,
size: 0.5,
source: 55721,
target: 388 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4780,
label: 'Philippe Sansonetti',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/06/research.pasteur.fr_philippe-sansonetti-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/philippe-sansonetti__trashed/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 557214780,
size: 0.5,
source: 55721,
target: 4780 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 7850,
label: 'Fabrice Agou',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/06/research.pasteur.fr_image010-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/fabrice-agou/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 557217850,
size: 0.5,
source: 55721,
target: 7850 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4939,
label: 'Sven van Teeffelen',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/?post_type=member&p=4939',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 557214939,
size: 0.5,
source: 55721,
target: 4939 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4604,
label: 'Philippe Clerc',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2019/08/research_pasteur-capture-decran-2019-08-01-a-13.12.17-150x150.png',
page_url: 'https://research.pasteur.fr/en/member/philippe-clerc/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 557214604,
size: 0.5,
source: 55721,
target: 4604 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4792) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 557214792,
size: 0.5,
source: 55721,
target: 4792 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 51154) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 5572151154,
size: 0.5,
source: 55721,
target: 51154 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4781,
label: 'Benoît Marteyn',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/11/research.pasteur.fr_benoit2-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/benoit-marteyn/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 557214781,
size: 0.5,
source: 55721,
target: 4781 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 6834) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 557216834,
size: 0.5,
source: 55721,
target: 6834 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4788) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 557214788,
size: 0.5,
source: 55721,
target: 4788 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 6368) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 557216368,
size: 0.5,
source: 55721,
target: 6368 });
var s = new sigma({
//container: document.getElementById('graph-main'),
graph: g,
renderer: {
// IMPORTANT:
// This works only with the canvas renderer, so the
// renderer type set as "canvas" is necessary here.
container: document.getElementById('graph-main'),
type: 'canvas'
},
settings: {
minNodeSize: 6,
maxNodeSize: 35,
mouseWheelEnabled: false,
font: 'Montserrat',
labelThreshold:25,
borderSize:1,
defaultNodeBorderColor: '#999',
sideMargin:25,
}
});
// We first need to save the original colors of our
// nodes and edges, like this:
s.graph.nodes().forEach(function(n) {
n.originalColor = n.color;
});
s.graph.edges().forEach(function(e) {
e.originalColor = e.color;
});
// When a node is clicked, we check for each node
// if it is a neighbor of the clicked one. If not,
// we set its color as grey, and else, it takes its
// original color.
// We do the same for the edges, and we only keep
// edges that have both extremities colored.
s.bind('clickNode', function(e) {
var nodeId = e.data.node.id,
toKeep = s.graph.neighbors(nodeId);
toKeep[nodeId] = e.data.node;
s.graph.nodes().forEach(function(n) {
if (toKeep[n.id])
n.color = '#35a9f5';
else
n.color = '#dddddd';
});
s.graph.edges().forEach(function(e) {
if (toKeep[e.source] && toKeep[e.target])
e.color = '#35a9f5';
else
e.color = '#dddddd';
});
// Since the data has been modified, we need to
// call the refresh method to make the colors
// update effective.
s.refresh();
});
// When the stage is clicked, we just color each
// node and edge with its original color.
s.bind('clickStage', function(e) {
s.graph.nodes().forEach(function(n) {
n.color = n.originalColor;
});
s.graph.edges().forEach(function(e) {
e.color = e.originalColor;
});
// Same as in the previous event:
s.refresh();
});
s.bind("doubleClickNode", function (e) {
$("#canvas-wrap, .sigma-scene, .sigma-mouse").val();
ajax_load_page( e.data.node.page_url );
});
var c = s.camera;
s.bind("rightClickStage", function (e) {
sigma.misc.animation.camera(c, {
ratio: c.ratio * c.settings('zoomingRatio')
}, {
duration: 200
});
});
// Configure the noverlap layout:
var noverlapListener = s.configNoverlap({
nodeMargin: 10,
scaleNodes: 0.3,
gridSize: 1,
easing: 'quadraticInOut', // animation transition function
duration: 4000 // animation duration. Long here for the purposes of this example only
});
// Bind the events:
noverlapListener.bind('start stop interpolate', function(e) {
//console.log(e.type);
if(e.type === 'start') {
//console.time('noverlap');
}
if(e.type === 'interpolate') {
//console.timeEnd('noverlap');
}
});
// Start the layout:
s.startNoverlap();
//s.refresh();
// Initialize the dragNodes plugin:
var dragListener = sigma.plugins.dragNodes(s, s.renderers[0]);
dragListener.bind('startdrag', function(event) {
});
dragListener.bind('drag', function(event) {
});
dragListener.bind('drop', function(event) {
});
dragListener.bind('dragend', function(event) {
});