GUIDE
- Left-click and drag the background to move the graph
- Left-click and drag the nodes to reorganize
- Left-click a node to view first level connections
- Double left-click a node to navigate to its page
- Double left-click the background to zoom in
- Right-click the background to zoom out
// graph team
sigma.utils.pkg('sigma.canvas.nodes');
sigma.canvas.nodes.image = (function() {
var _cache = {},
_loading = {},
_callbacks = {};
// Return the renderer itself:
var renderer = function(node, context, settings) {
var args = arguments,
prefix = settings('prefix') || '',
size = node[prefix + 'size'],
color = node.color || settings('defaultNodeColor'),
url = node.url;
if (_cache[url]) {
context.save();
// Draw the clipping disc:
context.beginPath();
context.arc(
node[prefix + 'x'],
node[prefix + 'y'],
node[prefix + 'size'],
0,
Math.PI * 2,
true
);
context.closePath();
context.clip();
// Draw the image
context.drawImage(
_cache[url],
node[prefix + 'x'] - size,
node[prefix + 'y'] - size,
2 * size,
2 * size
);
// Quit the "clipping mode":
context.restore();
// Draw the border:
context.beginPath();
context.arc(
node[prefix + 'x'],
node[prefix + 'y'],
node[prefix + 'size'],
0,
Math.PI * 2,
true
);
context.lineWidth = 1;
context.strokeStyle = node.color || settings('defaultNodeColor');
context.stroke();
} else {
sigma.canvas.nodes.image.cache(url);
sigma.canvas.nodes.def.apply(
sigma.canvas.nodes,
args
);
}
};
// Let's add a public method to cache images, to make it possible to
// preload images before the initial rendering:
renderer.cache = function(url, callback) {
if (callback)
_callbacks[url] = callback;
if (_loading[url])
return;
var img = new Image();
img.onload = function() {
_loading[url] = false;
_cache[url] = img;
if (_callbacks[url]) {
_callbacks[url].call(this, img);
delete _callbacks[url];
}
};
_loading[url] = true;
img.src = url;
};
return renderer;
})();
var i,
s,
o,
offset_left = 0.5,
N = 1,
E = 40,
C = 5,
d = 0.5,
cs = [],
g = {
nodes: [],
edges: []
};
if (!sigma.classes.graph.hasMethod('neighbors')){
sigma.classes.graph.addMethod('neighbors', function(nodeId) {
var k,
neighbors = {},
index = this.allNeighborsIndex[nodeId] || {};
for (k in index)
neighbors[k] = this.nodesIndex[k];
return neighbors;
});
}
//adding the central node
g.nodes.push({
id: 6228,
label: 'Environment and Infectious Risks',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_institutpasteur_i03450-150x150.jpg',
x: 0,
y: 0,
size: 30,
color: '#DDDDDD'
});
N=22
var x_node = Math.cos(2 * 0 * Math.PI / N) * 2;
var y_node = Math.sin(2 * 0 * Math.PI / N) * 2;
var biggest_node_size = 0;
//check if content already exist
x_site = Math.cos(2 * 0 * Math.PI / N) * 2;
y_site = Math.sin(2 * 0 * Math.PI / N) * 2;
// adding site
g.nodes.push({
id: 3975,
label: 'Laurent Dacheux',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2017/06/research_pasteur-dsc5234-e1498809574771-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/laurent-dacheux/',
x: x_site,
y: y_site,
size: 16,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 62283975,
size: 0.5,
source: 6228,
target: 3975 });
//check if content already exist
x_site = Math.cos(2 * 1 * Math.PI / N) * 2;
y_site = Math.sin(2 * 1 * Math.PI / N) * 2;
// adding site
g.nodes.push({
id: 145290,
label: 'Charlotte Guy',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/member/charlotte-guy/',
x: x_site,
y: y_site,
size: 16,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 6228145290,
size: 0.5,
source: 6228,
target: 145290 });
//check if content already exist
x_site = Math.cos(2 * 2 * Math.PI / N) * 2;
y_site = Math.sin(2 * 2 * Math.PI / N) * 2;
// adding site
g.nodes.push({
id: 8538,
label: 'Fabienne Lomprez',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/member/fabienne-lomprez/',
x: x_site,
y: y_site,
size: 16,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 62288538,
size: 0.5,
source: 6228,
target: 8538 });
//check if content already exist
x_site = Math.cos(2 * 3 * Math.PI / N) * 2;
y_site = Math.sin(2 * 3 * Math.PI / N) * 2;
// adding site
g.nodes.push({
id: 8536,
label: 'Frédéric Fichenick',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/member/frederic-fichenick/',
x: x_site,
y: y_site,
size: 16,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 62288536,
size: 0.5,
source: 6228,
target: 8536 });
//check if content already exist
x_site = Math.cos(2 * 4 * Math.PI / N) * 2;
y_site = Math.sin(2 * 4 * Math.PI / N) * 2;
// adding site
g.nodes.push({
id: 4503,
label: 'Valérie Caro',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2020/07/research_pasteur-valerie_2020-3-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/valerie-caro/',
x: x_site,
y: y_site,
size: 16,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 62284503,
size: 0.5,
source: 6228,
target: 4503 });
//check if content already exist
x_site = Math.cos(2 * 5 * Math.PI / N) * 2;
y_site = Math.sin(2 * 5 * Math.PI / N) * 2;
// adding site
g.nodes.push({
id: 4506,
label: 'Valérie Choumet',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2016/11/research.pasteur.fr_dsc3750-coupe-2-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/valerie-choumet/',
x: x_site,
y: y_site,
size: 16,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 62284506,
size: 0.5,
source: 6228,
target: 4506 });
//check if content already exist
x_site = Math.cos(2 * 6 * Math.PI / N) * 2;
y_site = Math.sin(2 * 6 * Math.PI / N) * 2;
// adding site
g.nodes.push({
id: 4510,
label: 'Jessica Vanhomwegen',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/05/research_pasteur-jessica-vanhomwegen-photo-j-vanhomwegen-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/jessica-vanhomwegen/',
x: x_site,
y: y_site,
size: 16,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 62284510,
size: 0.5,
source: 6228,
target: 4510 });
//check if content already exist
x_site = Math.cos(2 * 7 * Math.PI / N) * 2;
y_site = Math.sin(2 * 7 * Math.PI / N) * 2;
// adding site
g.nodes.push({
id: 4505,
label: 'India Leclercq',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/09/research.pasteur.fr_india-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/india-leclercq/',
x: x_site,
y: y_site,
size: 16,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 62284505,
size: 0.5,
source: 6228,
target: 4505 });
//check if content already exist
x_site = Math.cos(2 * 8 * Math.PI / N) * 2;
y_site = Math.sin(2 * 8 * Math.PI / N) * 2;
// adding site
g.nodes.push({
id: 4519,
label: 'Anne Le Fleche',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/member/anne-le-fleche/',
x: x_site,
y: y_site,
size: 16,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 62284519,
size: 0.5,
source: 6228,
target: 4519 });
//check if content already exist
x_site = Math.cos(2 * 9 * Math.PI / N) * 2;
y_site = Math.sin(2 * 9 * Math.PI / N) * 2;
// adding site
g.nodes.push({
id: 4518,
label: 'Aurélia Kwasiborski',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/05/research_pasteur-aurelia-kwasiborski-photo-ak-bis-copie-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/aurelia-kwasiborski/',
x: x_site,
y: y_site,
size: 16,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 62284518,
size: 0.5,
source: 6228,
target: 4518 });
//check if content already exist
x_site = Math.cos(2 * 10 * Math.PI / N) * 2;
y_site = Math.sin(2 * 10 * Math.PI / N) * 2;
// adding site
g.nodes.push({
id: 40346,
label: 'Maxence Feher',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2017/03/research.pasteur.fr_maxence-1-150x150.jpeg',
page_url: 'https://research.pasteur.fr/en/member/maxence-feher/',
x: x_site,
y: y_site,
size: 16,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 622840346,
size: 0.5,
source: 6228,
target: 40346 });
//check if content already exist
x_site = Math.cos(2 * 11 * Math.PI / N) * 2;
y_site = Math.sin(2 * 11 * Math.PI / N) * 2;
// adding site
g.nodes.push({
id: 86658,
label: 'Charlotte Baliere',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2019/08/research_pasteur-img_20190813_105124-1-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/charlotte-baliere/',
x: x_site,
y: y_site,
size: 16,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 622886658,
size: 0.5,
source: 6228,
target: 86658 });
//check if content already exist
x_site = Math.cos(2 * 12 * Math.PI / N) * 2;
y_site = Math.sin(2 * 12 * Math.PI / N) * 2;
// adding site
g.nodes.push({
id: 8433,
label: 'Quentin Grassin',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2017/03/research.pasteur.fr_quentin-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/quentin-grassin/',
x: x_site,
y: y_site,
size: 16,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 62288433,
size: 0.5,
source: 6228,
target: 8433 });
//check if content already exist
x_site = Math.cos(2 * 13 * Math.PI / N) * 2;
y_site = Math.sin(2 * 13 * Math.PI / N) * 2;
// adding site
g.nodes.push({
id: 8557,
label: 'Damien Hoinard',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_dh-150x150.png',
page_url: 'https://research.pasteur.fr/en/member/damien-hoinard/',
x: x_site,
y: y_site,
size: 16,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 62288557,
size: 0.5,
source: 6228,
target: 8557 });
//check if content already exist
x_site = Math.cos(2 * 14 * Math.PI / N) * 2;
y_site = Math.sin(2 * 14 * Math.PI / N) * 2;
// adding site
g.nodes.push({
id: 52450,
label: 'Guillain Mikaty',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/10/research_pasteur-guillain-mikaty-image2-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/guillain-mikaty/',
x: x_site,
y: y_site,
size: 16,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 622852450,
size: 0.5,
source: 6228,
target: 52450 });
//check if content already exist
x_site = Math.cos(2 * 15 * Math.PI / N) * 2;
y_site = Math.sin(2 * 15 * Math.PI / N) * 2;
// adding site
g.nodes.push({
id: 1066,
label: 'Véronique Hourdel',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/02/research_pasteur-veronique-hourdel-vhourdel-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/veronique-hourdel/',
x: x_site,
y: y_site,
size: 16,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 62281066,
size: 0.5,
source: 6228,
target: 1066 });
//check if content already exist
x_site = Math.cos(2 * 16 * Math.PI / N) * 2;
y_site = Math.sin(2 * 16 * Math.PI / N) * 2;
// adding site
g.nodes.push({
id: 4898,
label: 'Myriam Ermonval',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/member/myriam-ermonval/',
x: x_site,
y: y_site,
size: 16,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 62284898,
size: 0.5,
source: 6228,
target: 4898 });
//check if content already exist
x_site = Math.cos(2 * 17 * Math.PI / N) * 2;
y_site = Math.sin(2 * 17 * Math.PI / N) * 2;
// adding site
g.nodes.push({
id: 186944,
label: 'Siby-Diakite Dieyenaba',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/member/siby-diakite-dieyenaba/',
x: x_site,
y: y_site,
size: 16,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 6228186944,
size: 0.5,
source: 6228,
target: 186944 });
//check if content already exist
x_site = Math.cos(2 * 18 * Math.PI / N) * 2;
y_site = Math.sin(2 * 18 * Math.PI / N) * 2;
// adding site
g.nodes.push({
id: 186965,
label: 'Virginie Sauvage',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/member/virginie-sauvage/',
x: x_site,
y: y_site,
size: 16,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 6228186965,
size: 0.5,
source: 6228,
target: 186965 });
//check if content already exist
x_site = Math.cos(2 * 19 * Math.PI / N) * 2;
y_site = Math.sin(2 * 19 * Math.PI / N) * 2;
// adding site
g.nodes.push({
id: 142906,
label: 'Angela Brisebarre',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/member/angela-brisebarre/',
x: x_site,
y: y_site,
size: 16,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 6228142906,
size: 0.5,
source: 6228,
target: 142906 });
//check if content already exist
x_site = Math.cos(2 * 20 * Math.PI / N) * 2;
y_site = Math.sin(2 * 20 * Math.PI / N) * 2;
// adding site
g.nodes.push({
id: 232275,
label: 'Nolwenn Bayle',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/member/nolwenn-bayle/',
x: x_site,
y: y_site,
size: 16,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 6228232275,
size: 0.5,
source: 6228,
target: 232275 });
//check if content already exist
x_site = Math.cos(2 * 21 * Math.PI / N) * 2;
y_site = Math.sin(2 * 21 * Math.PI / N) * 2;
// adding site
g.nodes.push({
id: 4508,
label: 'Jean-Claude Manuguerra',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_fig43-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/jean-claude-manuguerra/',
x: x_site,
y: y_site,
size: 16,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 62284508,
size: 0.5,
source: 6228,
target: 4508 });
// update positions
x_node = Math.cos(2 * 0 * Math.PI / N) * 10;
y_node = Math.sin(2 * 0 * Math.PI / N) * 10;
N=33
// adding node
var x_node = Math.cos(2 * 0 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 0 * Math.PI / N) * 10;
g.nodes.push({
id: 235017,
label: 'PROJECT: ANR – Priority programs and equipment for exploratory research (PEPR) CNES (ORIGINS) MARCUS',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/project/anr-programmes-et-equipements-prioritaires-de-recherche-exploratoires-pepr-cnes-origins-marcus/',
size: 24,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 6228235017,
size: 0.5,
source: 6228,
target: 235017 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4510) {
n.size = n.size + 10;
if ( n.size > biggest_node_size ){
biggest_node_size = n.size;
}
}
});
g.nodes.forEach(function(n) {
if (n.id == 6228) {
if ( n.size < biggest_node_size ){
n.size = biggest_node_size;
}
}
});
//link to content
g.edges.push({
id: 2350174510,
size: 0.5,
source: 235017,
target: 4510 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 3975) {
n.size = n.size + 10;
if ( n.size > biggest_node_size ){
biggest_node_size = n.size;
}
}
});
g.nodes.forEach(function(n) {
if (n.id == 6228) {
if ( n.size < biggest_node_size ){
n.size = biggest_node_size;
}
}
});
//link to content
g.edges.push({
id: 2350173975,
size: 0.5,
source: 235017,
target: 3975 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 152964,
label: 'Sandrine Aros',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2021/01/research_pasteur-sandrine-aros-photo-sa-4-150x150.png',
page_url: 'https://research.pasteur.fr/en/member/sandrine-aros/',
x: x_site,
y: y_site,
size: 10,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 235017152964,
size: 0.5,
source: 235017,
target: 152964 });
// adding node
var x_node = Math.cos(2 * 1 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 1 * Math.PI / N) * 10;
g.nodes.push({
id: 186935,
label: 'PROJECT: Évaluation de l’état sanitaire des populations de rats et autres petits mammifères',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/project/fr-evaluation-de-letat-sanitaire-des-populations-de-rats-et-autres-petits-mammiferes/',
size: 24,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 6228186935,
size: 0.5,
source: 6228,
target: 186935 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 8538) {
n.size = n.size + 10;
if ( n.size > biggest_node_size ){
biggest_node_size = n.size;
}
}
});
g.nodes.forEach(function(n) {
if (n.id == 6228) {
if ( n.size < biggest_node_size ){
n.size = biggest_node_size;
}
}
});
//link to content
g.edges.push({
id: 1869358538,
size: 0.5,
source: 186935,
target: 8538 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 40346) {
n.size = n.size + 10;
if ( n.size > biggest_node_size ){
biggest_node_size = n.size;
}
}
});
g.nodes.forEach(function(n) {
if (n.id == 6228) {
if ( n.size < biggest_node_size ){
n.size = biggest_node_size;
}
}
});
//link to content
g.edges.push({
id: 18693540346,
size: 0.5,
source: 186935,
target: 40346 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 8557) {
n.size = n.size + 10;
if ( n.size > biggest_node_size ){
biggest_node_size = n.size;
}
}
});
g.nodes.forEach(function(n) {
if (n.id == 6228) {
if ( n.size < biggest_node_size ){
n.size = biggest_node_size;
}
}
});
//link to content
g.edges.push({
id: 1869358557,
size: 0.5,
source: 186935,
target: 8557 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 8433) {
n.size = n.size + 10;
if ( n.size > biggest_node_size ){
biggest_node_size = n.size;
}
}
});
g.nodes.forEach(function(n) {
if (n.id == 6228) {
if ( n.size < biggest_node_size ){
n.size = biggest_node_size;
}
}
});
//link to content
g.edges.push({
id: 1869358433,
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label: 'Valérie Bouchez',
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label: 'Elisabeth Njamkepo Nguemkam',
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label: 'Vincent Enouf',
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label: 'Michael Nilges',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2017/02/research.pasteur.fr_dsc3513-copy-1-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/michael-nilges/',
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label: 'Jean-Christophe Olivo-Marin',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2018/04/research_pasteur-photojcom_2016_2-150x150.png',
page_url: 'https://research.pasteur.fr/en/member/jean-christophe-olivo-marin/',
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y: y_site,
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// adding site
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label: 'Pablo Navarro Gil',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2019/10/research_pasteur-institut-pasteur_portraits-studio_gcc_162-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/pablo-navarro-gil/',
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// adding site
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label: 'Rayan Chikhi',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2019/05/research_pasteur-photo_pasteur-150x150.png',
page_url: 'https://research.pasteur.fr/en/member/rayan-chikhi/',
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label: 'Hugues Aschard',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2016/11/research.pasteur.fr_p8191439-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/hugues-aschard/',
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label: 'Stéphane Fournier',
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label: 'Grégory Batt',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2017/01/research_pasteur-gregory-batt-inria-0474-034-1-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/gregory-batt/',
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type: 'image',
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page_url: 'https://research.pasteur.fr/en/project/kerarbo-role-of-salivary-factors-of-aedes-albopictus-in-the-permissiveness-of-human-skin-cells-to-dengue-and-chikungunya-viruses/',
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label: 'PROJECT: Metagenomics for Pathogen Detection',
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label: 'Jean-Michel Thiberge',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2018/12/research_pasteur-019180-1-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/jean-michel-thiberge/',
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// adding site
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label: 'Laure Diancourt',
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url: '',
page_url: 'https://research.pasteur.fr/en/member/laure-diancourt/',
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url: '',
page_url: '',
x: x_site,
y: y_site,
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var y_node = Math.sin(2 * 20 * Math.PI / N) * 10;
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label: 'PROJECT: Groupe Arbovirus',
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y: y_node,
type: 'image',
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// adding site
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label: 'Nathalie Pardigon',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/?post_type=member&p=4509',
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y: y_site,
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// adding site
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label: 'Marie-Pascale Frenkiel',
type: 'image',
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page_url: 'https://research.pasteur.fr/en/member/marie-pascale-frenkiel/',
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page_url: '',
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label: 'PROJECT: EPICOREM',
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label: 'Astrid Vabret',
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x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
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y_site = y_node + ((Math.random() * 2)-1) - offset_left;
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id: 4521,
label: 'Meriadeg Le Gouil',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/?post_type=member&p=4521',
x: x_site,
y: y_site,
size: 10,
color: '#DDDDDD'
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g.nodes.push({
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label: 'PROJECT: PREDEMICS WorkPackage 1',
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y: y_node,
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/09/research.pasteur.fr_predemics-1-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/project/predemics-workpackage-1/',
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//check if content already exist
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x_site = x_node + ((Math.random() * 2)-1) - offset_left;
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x_site = x_node + ((Math.random() * 2)-1) + offset_left;
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y_site = y_node + ((Math.random() * 2)-1) - offset_left;
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// adding site
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label: '',
type: 'image',
url: '',
page_url: '',
x: x_site,
y: y_site,
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//check if content already exist
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//check if content already exist
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if ( n.size < biggest_node_size ){
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//check if content already exist
// update node size depending on the amount of edges
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if (n.id == 4508) {
n.size = n.size + 10;
if ( n.size > biggest_node_size ){
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g.nodes.forEach(function(n) {
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// adding node
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var y_node = Math.sin(2 * 23 * Math.PI / N) * 10;
g.nodes.push({
id: 40378,
label: 'PROJECT: Pôle d’Identification Virale (PIV)',
x: x_node,
y: y_node,
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/09/research.pasteur.fr_piv-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/project/pole-didentification-virale-piv/',
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//check if content already exist
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g.nodes.forEach(function(n) {
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//link to content
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//check if content already exist
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if ( n.size > biggest_node_size ){
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//check if content already exist
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}
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y_site = y_node + ((Math.random() * 2)-1) - offset_left;
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y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
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label: '',
type: 'image',
url: '',
page_url: '',
x: x_site,
y: y_site,
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color: '#DDDDDD'
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// adding node
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var y_node = Math.sin(2 * 24 * Math.PI / N) * 10;
g.nodes.push({
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label: 'PROJECT: Pôle d’Identification Bactérienne (PIB)',
x: x_node,
y: y_node,
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/09/research.pasteur.fr_pib-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/project/pole-didentification-bacterienne-pib/',
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//link to content
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if (n.id == 8536) {
n.size = n.size + 10;
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biggest_node_size = n.size;
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g.nodes.forEach(function(n) {
if (n.id == 6228) {
if ( n.size < biggest_node_size ){
n.size = biggest_node_size;
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//link to content
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//check if content already exist
// update node size depending on the amount of edges
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n.size = n.size + 10;
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biggest_node_size = n.size;
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}
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g.nodes.forEach(function(n) {
if (n.id == 6228) {
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n.size = biggest_node_size;
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//link to content
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// adding node
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var y_node = Math.sin(2 * 25 * Math.PI / N) * 10;
g.nodes.push({
id: 40357,
label: 'PROJECT: Pôle de Génotypage des Pathogènes (PGP)',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/project/pole-de-genotypage-des-pathogenes-pgp/',
size: 24,
color: '#DDDDDD'
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//link content to central post
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if (n.id == 4504) {
n.size = n.size + 10;
if ( n.size > biggest_node_size ){
biggest_node_size = n.size;
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g.nodes.forEach(function(n) {
if (n.id == 6228) {
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//link to content
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source: 40357,
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//check if content already exist
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g.nodes.forEach(function(n) {
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//link to content
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//check if content already exist
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g.nodes.forEach(function(n) {
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//link to content
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//check if content already exist
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g.nodes.forEach(function(n) {
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//check if content already exist
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var y_node = Math.sin(2 * 26 * Math.PI / N) * 10;
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label: 'PROJECT: Design and optimization of new bioluminescent systems better-suited to in cellulo and in vivo conditions',
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y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/project/design-and-optimization-of-new-bioluminescent-systems-better-suited-to-in-cellulo-and-in-vivo-conditions/',
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y_site = y_node + ((Math.random() * 2)-1) - offset_left;
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url: '',
page_url: '',
x: x_site,
y: y_site,
size: 10,
color: '#DDDDDD'
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//check if content already exist
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x_site = x_node + ((Math.random() * 2)-1) - offset_left;
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x_site = x_node + ((Math.random() * 2)-1) + offset_left;
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if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
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y_site = y_node + ((Math.random() * 2)-1) + offset_left;
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label: 'Glwadys Gagnot',
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url: '',
page_url: 'https://research.pasteur.fr/en/?post_type=member&p=64990',
x: x_site,
y: y_site,
size: 10,
color: '#DDDDDD'
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y_site = y_node + ((Math.random() * 2)-1) - offset_left;
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y_site = y_node + ((Math.random() * 2)-1) + offset_left;
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label: 'Yves Janin',
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page_url: 'https://research.pasteur.fr/en/?post_type=member&p=4692',
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label: 'Yves Jacob',
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page_url: 'https://research.pasteur.fr/en/?post_type=member&p=4928',
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url: 'https://research.pasteur.fr/wp-content/uploads/2015/02/Thierry_Rose-e1423234985507-150x150.jpg',
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label: 'Sophie Goyard',
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url: 'https://research.pasteur.fr/wp-content/uploads/2015/02/research_pasteur-sophie-goyard-goyard-sophie-0463-scaled-e1666255960637-150x150.jpg',
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//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 203306) {
n.size = n.size + 10;
if ( n.size > biggest_node_size ){
biggest_node_size = n.size;
}
}
});
g.nodes.forEach(function(n) {
if (n.id == 6228) {
if ( n.size < biggest_node_size ){
n.size = biggest_node_size;
}
}
});
//link to content
g.edges.push({
id: 14686203306,
size: 0.5,
source: 14686,
target: 203306 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 3949,
label: 'Philippe Bastin',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/06/research.pasteur.fr_philippe_bastin-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/philippe-bastin/',
x: x_site,
y: y_site,
size: 10,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 146863949,
size: 0.5,
source: 14686,
target: 3949 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4775,
label: 'Carla Saleh',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_ha68-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/carla-saleh/',
x: x_site,
y: y_site,
size: 10,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 146864775,
size: 0.5,
source: 14686,
target: 4775 });
// adding node
var x_node = Math.cos(2 * 31 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 31 * Math.PI / N) * 10;
g.nodes.push({
id: 13736,
label: 'RIIP_PROJECT: MediLabSecure',
x: x_node,
y: y_node,
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2016/12/research.pasteur.fr_logo_medilabsecure_light-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/riip_project/medilabsecure/',
size: 24,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 622813736,
size: 0.5,
source: 6228,
target: 13736 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 72350,
label: 'M’hammed Sarih',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/riip_member/mhammed-sarih/',
x: x_site,
y: y_site,
size: 10,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 1373672350,
size: 0.5,
source: 13736,
target: 72350 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 72399,
label: 'Zoubir Harrat',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2016/06/1007-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/riip_member/zoubir-harrat/',
x: x_site,
y: y_site,
size: 10,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 1373672399,
size: 0.5,
source: 13736,
target: 72399 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 72401,
label: 'Aïssam Hachid',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/riip_member/aissam-hachid/',
x: x_site,
y: y_site,
size: 10,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 1373672401,
size: 0.5,
source: 13736,
target: 72401 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 72400,
label: 'Mohamed Seghier',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/riip_member/mohamed-seghier/',
x: x_site,
y: y_site,
size: 10,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 1373672400,
size: 0.5,
source: 13736,
target: 72400 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 72402,
label: 'Fawzi Derrar',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/riip_member/fawzi-derrar/',
x: x_site,
y: y_site,
size: 10,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 1373672402,
size: 0.5,
source: 13736,
target: 72402 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 72351,
label: 'Jalal Nourlil',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2016/06/567-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/riip_member/jalal-nourlil/',
x: x_site,
y: y_site,
size: 10,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 1373672351,
size: 0.5,
source: 13736,
target: 72351 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4508) {
n.size = n.size + 10;
if ( n.size > biggest_node_size ){
biggest_node_size = n.size;
}
}
});
g.nodes.forEach(function(n) {
if (n.id == 6228) {
if ( n.size < biggest_node_size ){
n.size = biggest_node_size;
}
}
});
//link to content
g.edges.push({
id: 137364508,
size: 0.5,
source: 13736,
target: 4508 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4507,
label: 'Camille Escadafal',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/?post_type=member&p=4507',
x: x_site,
y: y_site,
size: 10,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 137364507,
size: 0.5,
source: 13736,
target: 4507 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 81199,
label: 'Kathleen Victoir',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/member/kathleen-victoir/',
x: x_site,
y: y_site,
size: 10,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 1373681199,
size: 0.5,
source: 13736,
target: 81199 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 71410,
label: 'Lobna Gaayeb',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2016/06/research.pasteur.fr_lobnapic-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/lobna-gaayeb/',
x: x_site,
y: y_site,
size: 10,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 1373671410,
size: 0.5,
source: 13736,
target: 71410 });
// adding node
var x_node = Math.cos(2 * 32 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 32 * Math.PI / N) * 10;
g.nodes.push({
id: 65482,
label: 'TEAM: Group : Valérie Choumet',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/team/group-valerie-choumet/',
size: 24,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 622865482,
size: 0.5,
source: 6228,
target: 65482 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 105887) {
n.size = n.size + 10;
if ( n.size > biggest_node_size ){
biggest_node_size = n.size;
}
}
});
g.nodes.forEach(function(n) {
if (n.id == 6228) {
if ( n.size < biggest_node_size ){
n.size = biggest_node_size;
}
}
});
//link to content
g.edges.push({
id: 65482105887,
size: 0.5,
source: 65482,
target: 105887 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4519) {
n.size = n.size + 10;
if ( n.size > biggest_node_size ){
biggest_node_size = n.size;
}
}
});
g.nodes.forEach(function(n) {
if (n.id == 6228) {
if ( n.size < biggest_node_size ){
n.size = biggest_node_size;
}
}
});
//link to content
g.edges.push({
id: 654824519,
size: 0.5,
source: 65482,
target: 4519 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4506) {
n.size = n.size + 10;
if ( n.size > biggest_node_size ){
biggest_node_size = n.size;
}
}
});
g.nodes.forEach(function(n) {
if (n.id == 6228) {
if ( n.size < biggest_node_size ){
n.size = biggest_node_size;
}
}
});
//link to content
g.edges.push({
id: 654824506,
size: 0.5,
source: 65482,
target: 4506 });
var s = new sigma({
//container: document.getElementById('graph-main'),
graph: g,
renderer: {
// IMPORTANT:
// This works only with the canvas renderer, so the
// renderer type set as "canvas" is necessary here.
container: document.getElementById('graph-main'),
type: 'canvas'
},
settings: {
minNodeSize: 12,
maxNodeSize: 30,
mouseWheelEnabled: false,
font: 'Montserrat',
labelThreshold:25,
borderSize:1,
defaultNodeBorderColor: '#333',
sideMargin:25,
}
});
// We first need to save the original colors of our
// nodes and edges, like this:
s.graph.nodes().forEach(function(n) {
n.originalColor = n.color;
//console.log(n.id);
//console.log(s.graph.nodes(n.id));
});
s.graph.edges().forEach(function(e) {
e.originalColor = e.color;
});
// When a node is clicked, we check for each node
// if it is a neighbor of the clicked one. If not,
// we set its color as grey, and else, it takes its
// original color.
// We do the same for the edges, and we only keep
// edges that have both extremities colored.
s.bind('clickNode', function(e) {
var nodeId = e.data.node.id,
toKeep = s.graph.neighbors(nodeId);
toKeep[nodeId] = e.data.node;
s.graph.nodes().forEach(function(n) {
if (toKeep[n.id])
n.color = '#35a9f5';
else
n.color = '#dddddd';
});
s.graph.edges().forEach(function(e) {
if (toKeep[e.source] && toKeep[e.target])
e.color = '#35a9f5';
else
e.color = '#dddddd';
});
// Since the data has been modified, we need to
// call the refresh method to make the colors
// update effective.
s.refresh();
});
// When the stage is clicked, we just color each
// node and edge with its original color.
s.bind('clickStage', function(e) {
s.graph.nodes().forEach(function(n) {
n.color = n.originalColor;
});
s.graph.edges().forEach(function(e) {
e.color = e.originalColor;
});
// Same as in the previous event:
s.refresh();
});
s.bind("doubleClickNode", function (e) {
$("#canvas-wrap, .sigma-scene, .sigma-mouse").val();
ajax_load_page( e.data.node.page_url );
});
var c = s.camera;
s.bind("rightClickStage", function (e) {
sigma.misc.animation.camera(c, {
ratio: c.ratio * c.settings('zoomingRatio')
}, {
duration: 200
});
});
// Configure the noverlap layout:
var noverlapListener = s.configNoverlap({
nodeMargin: 10,
scaleNodes: 0.3,
gridSize: 1,
easing: 'quadraticInOut', // animation transition function
duration: 4000 // animation duration. Long here for the purposes of this example only
});
// Bind the events:
noverlapListener.bind('start stop interpolate', function(e) {
//console.log(e.type);
if(e.type === 'start') {
//console.time('noverlap');
}
if(e.type === 'interpolate') {
//console.timeEnd('noverlap');
}
});
// Start the layout:
s.startNoverlap();
//s.refresh();
// Initialize the dragNodes plugin:
var dragListener = sigma.plugins.dragNodes(s, s.renderers[0]);
dragListener.bind('startdrag', function(event) {
});
dragListener.bind('drag', function(event) {
});
dragListener.bind('drop', function(event) {
});
dragListener.bind('dragend', function(event) {
});