GUIDE
- Left-click and drag the background to move the graph
- Left-click and drag the nodes to reorganize
- Left-click a node to view first level connections
- Double left-click a node to navigate to its page
- Double left-click the background to zoom in
- Right-click the background to zoom out
sigma.utils.pkg('sigma.canvas.nodes');
sigma.canvas.nodes.image = (function() {
var _cache = {},
_loading = {},
_callbacks = {};
// Return the renderer itself:
var renderer = function(node, context, settings) {
var args = arguments,
prefix = settings('prefix') || '',
size = node[prefix + 'size'],
color = node.color || settings('defaultNodeColor'),
url = node.url;
if (_cache[url]) {
context.save();
// Draw the clipping disc:
context.beginPath();
context.arc(
node[prefix + 'x'],
node[prefix + 'y'],
node[prefix + 'size'],
0,
Math.PI * 2,
true
);
context.closePath();
context.clip();
// Draw the image
context.drawImage(
_cache[url],
node[prefix + 'x'] - size,
node[prefix + 'y'] - size,
2 * size,
2 * size
);
// Quit the "clipping mode":
context.restore();
// Draw the border:
context.beginPath();
context.arc(
node[prefix + 'x'],
node[prefix + 'y'],
node[prefix + 'size'],
0,
Math.PI * 2,
true
);
context.lineWidth = 1;
context.strokeStyle = node.color || settings('defaultNodeColor');
context.stroke();
} else {
sigma.canvas.nodes.image.cache(url);
sigma.canvas.nodes.def.apply(
sigma.canvas.nodes,
args
);
}
};
// Let's add a public method to cache images, to make it possible to
// preload images before the initial rendering:
renderer.cache = function(url, callback) {
if (callback)
_callbacks[url] = callback;
if (_loading[url])
return;
var img = new Image();
img.onload = function() {
_loading[url] = false;
_cache[url] = img;
if (_callbacks[url]) {
_callbacks[url].call(this, img);
delete _callbacks[url];
}
};
_loading[url] = true;
img.src = url;
};
return renderer;
})();
var i,
s,
o,
offset_left = 0.5,
N = 1,
E = 40,
C = 5,
d = 0.5,
cs = [],
g = {
nodes: [],
edges: []
};
if (!sigma.classes.graph.hasMethod('neighbors')){
sigma.classes.graph.addMethod('neighbors', function(nodeId) {
var k,
neighbors = {},
index = this.allNeighborsIndex[nodeId] || {};
for (k in index)
neighbors[k] = this.nodesIndex[k];
return neighbors;
});
}
//adding the central node
g.nodes.push({
id: 6193,
label: 'Genetics of Biofilms',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2018/01/research_pasteur-unite-biofilm-150x150.jpg',
x: 0,
y: 0,
size: 30,
color: '#DDDDDD'
});
N=12
var x_node = Math.cos(2 * 0 * Math.PI / N) * 2;
var y_node = Math.sin(2 * 0 * Math.PI / N) * 2;
var biggest_node_size = 0;
//check if content already exist
x_site = Math.cos(2 * 0 * Math.PI / N) * 2;
y_site = Math.sin(2 * 0 * Math.PI / N) * 2;
// adding site
g.nodes.push({
id: 4335,
label: 'Christophe Beloin',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/09/research.pasteur.fr_christophe2-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/christophe-beloin/',
x: x_site,
y: y_site,
size: 16,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 61934335,
size: 0.5,
source: 6193,
target: 4335 });
//check if content already exist
x_site = Math.cos(2 * 1 * Math.PI / N) * 2;
y_site = Math.sin(2 * 1 * Math.PI / N) * 2;
// adding site
g.nodes.push({
id: 4345,
label: 'Sylvie Létoffé',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/09/research.pasteur.fr_sylvie2-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/sylvie-letoffe/',
x: x_site,
y: y_site,
size: 16,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 61934345,
size: 0.5,
source: 6193,
target: 4345 });
//check if content already exist
x_site = Math.cos(2 * 2 * Math.PI / N) * 2;
y_site = Math.sin(2 * 2 * Math.PI / N) * 2;
// adding site
g.nodes.push({
id: 4344,
label: 'Bianca Audrain',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/09/research.pasteur.fr_bianca2-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/bianca-audrain/',
x: x_site,
y: y_site,
size: 16,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 61934344,
size: 0.5,
source: 6193,
target: 4344 });
//check if content already exist
x_site = Math.cos(2 * 3 * Math.PI / N) * 2;
y_site = Math.sin(2 * 3 * Math.PI / N) * 2;
// adding site
g.nodes.push({
id: 8320,
label: 'Pascale Sitbon',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/09/research.pasteur.fr_pascale2-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/pascale-sitbon/',
x: x_site,
y: y_site,
size: 16,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 61938320,
size: 0.5,
source: 6193,
target: 8320 });
//check if content already exist
x_site = Math.cos(2 * 4 * Math.PI / N) * 2;
y_site = Math.sin(2 * 4 * Math.PI / N) * 2;
// adding site
g.nodes.push({
id: 4341,
label: 'Aimee Wessel',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/09/research.pasteur.fr_aimee2-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/aimee-wessel/',
x: x_site,
y: y_site,
size: 16,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 61934341,
size: 0.5,
source: 6193,
target: 4341 });
//check if content already exist
x_site = Math.cos(2 * 5 * Math.PI / N) * 2;
y_site = Math.sin(2 * 5 * Math.PI / N) * 2;
// adding site
g.nodes.push({
id: 77661,
label: 'David Perez Pascual',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2018/04/research_pasteur-david-2-1-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/david-perez-pascual/',
x: x_site,
y: y_site,
size: 16,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 619377661,
size: 0.5,
source: 6193,
target: 77661 });
//check if content already exist
x_site = Math.cos(2 * 6 * Math.PI / N) * 2;
y_site = Math.sin(2 * 6 * Math.PI / N) * 2;
// adding site
g.nodes.push({
id: 95034,
label: 'Mari Yoshida',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2017/09/research_pasteur-mari-1-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/mari-yoshida/',
x: x_site,
y: y_site,
size: 16,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 619395034,
size: 0.5,
source: 6193,
target: 95034 });
//check if content already exist
x_site = Math.cos(2 * 7 * Math.PI / N) * 2;
y_site = Math.sin(2 * 7 * Math.PI / N) * 2;
// adding site
g.nodes.push({
id: 106618,
label: 'Yutaka Yoshii',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2018/04/research_pasteur-yutaka-2-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/yutaka-yoshii/',
x: x_site,
y: y_site,
size: 16,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 6193106618,
size: 0.5,
source: 6193,
target: 106618 });
//check if content already exist
x_site = Math.cos(2 * 8 * Math.PI / N) * 2;
y_site = Math.sin(2 * 8 * Math.PI / N) * 2;
// adding site
g.nodes.push({
id: 77657,
label: 'Nathalie Béchon',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2016/10/research.pasteur.fr_nathalie-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/nathalie-bechon/',
x: x_site,
y: y_site,
size: 16,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 619377657,
size: 0.5,
source: 6193,
target: 77657 });
//check if content already exist
x_site = Math.cos(2 * 9 * Math.PI / N) * 2;
y_site = Math.sin(2 * 9 * Math.PI / N) * 2;
// adding site
g.nodes.push({
id: 95038,
label: 'Sol Vendrell Fernandez',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2017/09/research_pasteur-sol-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/sol-vendrell-fernandez/',
x: x_site,
y: y_site,
size: 16,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 619395038,
size: 0.5,
source: 6193,
target: 95038 });
//check if content already exist
x_site = Math.cos(2 * 10 * Math.PI / N) * 2;
y_site = Math.sin(2 * 10 * Math.PI / N) * 2;
// adding site
g.nodes.push({
id: 85914,
label: 'Hanifa Bouziri',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2017/02/research.pasteur.fr_capture-d’écran-2016-11-25-à-18.55.01-150x150.png',
page_url: 'https://research.pasteur.fr/en/member/fr-hanifa-bouziri/',
x: x_site,
y: y_site,
size: 16,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 619385914,
size: 0.5,
source: 6193,
target: 85914 });
//check if content already exist
x_site = Math.cos(2 * 11 * Math.PI / N) * 2;
y_site = Math.sin(2 * 11 * Math.PI / N) * 2;
// adding site
g.nodes.push({
id: 4337,
label: 'Jean-Marc Ghigo',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/05/research.pasteur.fr_jean-marc-ghigo1-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/jean-marc-ghigo/',
x: x_site,
y: y_site,
size: 16,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 61934337,
size: 0.5,
source: 6193,
target: 4337 });
// update positions
x_node = Math.cos(2 * 0 * Math.PI / N) * 10;
y_node = Math.sin(2 * 0 * Math.PI / N) * 10;
N=20
// adding node
var x_node = Math.cos(2 * 0 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 0 * Math.PI / N) * 10;
g.nodes.push({
id: 104554,
label: 'EVENT: Department of Microbiology – Seminar “Journal Club” by Mari Yoshida',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/event/department-microbiology-seminar-journal-club-mari-yoshida/',
size: 24,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 6193104554,
size: 0.5,
source: 6193,
target: 104554 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4679,
label: 'Nadia Benaroudj',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2016/10/research.pasteur.fr_benaroudj-nadia-1-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/nadia-benaroudj/',
x: x_site,
y: y_site,
size: 10,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 1045544679,
size: 0.5,
source: 104554,
target: 4679 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4279,
label: 'Pierre Beguin',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_pierre_beguin-150x150.png',
page_url: 'https://research.pasteur.fr/en/member/pierre-beguin/',
x: x_site,
y: y_site,
size: 10,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 1045544279,
size: 0.5,
source: 104554,
target: 4279 });
// adding node
var x_node = Math.cos(2 * 1 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 1 * Math.PI / N) * 10;
g.nodes.push({
id: 101255,
label: 'EVENT: 8th ASM Conference on Biofilms',
x: x_node,
y: y_node,
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2018/01/research_pasteur-8th-asm-biofilm-conference-150x150.jpeg',
page_url: 'https://research.pasteur.fr/en/event/8th-asm-conference-biofilms/',
size: 24,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 6193101255,
size: 0.5,
source: 6193,
target: 101255 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4337) {
n.size = n.size + 10;
if ( n.size > biggest_node_size ){
biggest_node_size = n.size;
}
}
});
g.nodes.forEach(function(n) {
if (n.id == 6193) {
if ( n.size < biggest_node_size ){
n.size = biggest_node_size;
}
}
});
//link to content
g.edges.push({
id: 1012554337,
size: 0.5,
source: 101255,
target: 4337 });
// adding node
var x_node = Math.cos(2 * 2 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 2 * Math.PI / N) * 10;
g.nodes.push({
id: 101243,
label: 'PROJECT: Molecular Bases of Colonization Resistance',
x: x_node,
y: y_node,
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/08/research.pasteur.fr_mixzd.biofilm-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/project/molecular-bases-colonization-resistance/',
size: 24,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 6193101243,
size: 0.5,
source: 6193,
target: 101243 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 77661) {
n.size = n.size + 10;
if ( n.size > biggest_node_size ){
biggest_node_size = n.size;
}
}
});
g.nodes.forEach(function(n) {
if (n.id == 6193) {
if ( n.size < biggest_node_size ){
n.size = biggest_node_size;
}
}
});
//link to content
g.edges.push({
id: 10124377661,
size: 0.5,
source: 101243,
target: 77661 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4344) {
n.size = n.size + 10;
if ( n.size > biggest_node_size ){
biggest_node_size = n.size;
}
}
});
g.nodes.forEach(function(n) {
if (n.id == 6193) {
if ( n.size < biggest_node_size ){
n.size = biggest_node_size;
}
}
});
//link to content
g.edges.push({
id: 1012434344,
size: 0.5,
source: 101243,
target: 4344 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 95038) {
n.size = n.size + 10;
if ( n.size > biggest_node_size ){
biggest_node_size = n.size;
}
}
});
g.nodes.forEach(function(n) {
if (n.id == 6193) {
if ( n.size < biggest_node_size ){
n.size = biggest_node_size;
}
}
});
//link to content
g.edges.push({
id: 10124395038,
size: 0.5,
source: 101243,
target: 95038 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4397,
label: 'Jean-Pierre Levraud',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_jplevraud-portrait-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/jean-pierre-levraud/',
x: x_site,
y: y_site,
size: 10,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 1012434397,
size: 0.5,
source: 101243,
target: 4397 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4337) {
n.size = n.size + 10;
if ( n.size > biggest_node_size ){
biggest_node_size = n.size;
}
}
});
g.nodes.forEach(function(n) {
if (n.id == 6193) {
if ( n.size < biggest_node_size ){
n.size = biggest_node_size;
}
}
});
//link to content
g.edges.push({
id: 1012434337,
size: 0.5,
source: 101243,
target: 4337 });
// adding node
var x_node = Math.cos(2 * 3 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 3 * Math.PI / N) * 10;
g.nodes.push({
id: 88433,
label: 'EVENT: Department of Microbiology – Seminar “Journal Club” by Christa Ivanova',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/event/seminar-journal-club-by-christa-ivanova/',
size: 24,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 619388433,
size: 0.5,
source: 6193,
target: 88433 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 67842,
label: 'Christa Ivanova',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2016/04/research.pasteur.fr_christa2-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/christa-ivanova-herr/',
x: x_site,
y: y_site,
size: 10,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 8843367842,
size: 0.5,
source: 88433,
target: 67842 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4279) {
n.size = n.size + 10;
if ( n.size > biggest_node_size ){
biggest_node_size = n.size;
}
}
});
g.nodes.forEach(function(n) {
if (n.id == 6193) {
if ( n.size < biggest_node_size ){
n.size = biggest_node_size;
}
}
});
//link to content
g.edges.push({
id: 884334279,
size: 0.5,
source: 88433,
target: 4279 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4679) {
n.size = n.size + 10;
if ( n.size > biggest_node_size ){
biggest_node_size = n.size;
}
}
});
g.nodes.forEach(function(n) {
if (n.id == 6193) {
if ( n.size < biggest_node_size ){
n.size = biggest_node_size;
}
}
});
//link to content
g.edges.push({
id: 884334679,
size: 0.5,
source: 88433,
target: 4679 });
// adding node
var x_node = Math.cos(2 * 4 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 4 * Math.PI / N) * 10;
g.nodes.push({
id: 80943,
label: 'PROGRAM_PROJECT: Fighting Antibiotic Resistance',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/program_project/fighting-antibiotic-resistance/',
size: 24,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 619380943,
size: 0.5,
source: 6193,
target: 80943 });
// adding node
var x_node = Math.cos(2 * 5 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 5 * Math.PI / N) * 10;
g.nodes.push({
id: 77916,
label: 'PROGRAM_PROJECT: INCEPTION – Institut Convergence for the study of Emergence of Pathology Through Individuals and Populations',
x: x_node,
y: y_node,
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2016/10/research.pasteur.fr_inception-program-institut-convergence-for-the-study-of-emergence-of-pathology-through-individuals-and-populations-150x150.jpeg',
page_url: 'https://research.pasteur.fr/en/program_project/inception/',
size: 24,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 619377916,
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label: 'Alicia Jimenez Fernandez',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2017/05/research_pasteur-alicia-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/alicia-jimenez-fernandez/',
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// adding site
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label: 'Jovana Mihajlovic',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/09/research.pasteur.fr_jovana2-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/jovana-mihajlovic/',
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page_url: 'https://research.pasteur.fr/en/project/bacterial-interactions-in-in-vitro-biofilms/',
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label: 'Franziska Stressmann',
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url: 'https://research.pasteur.fr/wp-content/uploads/2015/09/research.pasteur.fr_franziska2-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/franziska-stressmann/',
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label: 'Joaquin Bernal',
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url: 'https://research.pasteur.fr/wp-content/uploads/2015/09/research.pasteur.fr_joaquin2-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/joaquin-bernal/',
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//check if content already exist
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label: 'TOOL: Biofilm Microfermenters',
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url: 'https://research.pasteur.fr/wp-content/uploads/2015/08/research.pasteur.fr_microfermenterrond1-150x150.jpg',
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//link to content
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//check if content already exist
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var y_node = Math.sin(2 * 11 * Math.PI / N) * 10;
g.nodes.push({
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label: 'PROGRAM_PROJECT: Institut Carnot Pasteur MS',
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url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_bac-culture-150x150.jpg',
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y_site = y_node + ((Math.random() * 2)-1) - offset_left;
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// adding site
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label: 'Marie-Anne Lin',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_linmarieanne-250x145-150x150.jpeg',
page_url: 'https://research.pasteur.fr/en/member/marie-anne-lin/',
x: x_site,
y: y_site,
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// adding site
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label: 'Magdalena Salik',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/member/magdalena-salik/',
x: x_site,
y: y_site,
size: 10,
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// adding site
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label: 'Daniel Larzul',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/member/daniel-larzul/',
x: x_site,
y: y_site,
size: 10,
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y_site = y_node + ((Math.random() * 2)-1) - offset_left;
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// adding site
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label: 'Christophe D’Enfert',
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url: 'https://research.pasteur.fr/wp-content/uploads/2015/05/denfert_0-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/christophe-denfert/',
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y: y_site,
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label: 'Chiara Zurzolo',
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url: 'https://research.pasteur.fr/wp-content/uploads/2015/06/research.pasteur.fr_05af2df2cd-e1433575652211-150x150.jpeg',
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y: y_site,
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// adding site
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label: 'Hilde De Reuse',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/06/research.pasteur.fr_hilde_de_reuse-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/hilde-de-reuse/',
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label: 'Monique Lafon',
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url: 'https://research.pasteur.fr/wp-content/uploads/2015/09/research.pasteur.fr_m-lafon-site-web-2-150x150.jpg',
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label: 'Isabelle Buckle',
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label: 'Gérald Spaeth',
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url: 'https://research.pasteur.fr/wp-content/uploads/2015/09/research.pasteur.fr_screen-shot-2015-09-11-at-7.46.25-am-150x150.png',
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y: y_site,
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label: 'Françoise Dromer',
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}
});
//link to content
g.edges.push({
id: 241544344,
size: 0.5,
source: 24154,
target: 4344 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 106618) {
n.size = n.size + 10;
if ( n.size > biggest_node_size ){
biggest_node_size = n.size;
}
}
});
g.nodes.forEach(function(n) {
if (n.id == 6193) {
if ( n.size < biggest_node_size ){
n.size = biggest_node_size;
}
}
});
//link to content
g.edges.push({
id: 24154106618,
size: 0.5,
source: 24154,
target: 106618 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4335) {
n.size = n.size + 10;
if ( n.size > biggest_node_size ){
biggest_node_size = n.size;
}
}
});
g.nodes.forEach(function(n) {
if (n.id == 6193) {
if ( n.size < biggest_node_size ){
n.size = biggest_node_size;
}
}
});
//link to content
g.edges.push({
id: 241544335,
size: 0.5,
source: 24154,
target: 4335 });
var s = new sigma({
//container: document.getElementById('graph-main'),
graph: g,
renderer: {
// IMPORTANT:
// This works only with the canvas renderer, so the
// renderer type set as "canvas" is necessary here.
container: document.getElementById('graph-main'),
type: 'canvas'
},
settings: {
minNodeSize: 12,
maxNodeSize: 30,
mouseWheelEnabled: false,
font: 'Montserrat',
labelThreshold:25,
borderSize:1,
defaultNodeBorderColor: '#333',
sideMargin:25,
}
});
// We first need to save the original colors of our
// nodes and edges, like this:
s.graph.nodes().forEach(function(n) {
n.originalColor = n.color;
//console.log(n.id);
//console.log(s.graph.nodes(n.id));
});
s.graph.edges().forEach(function(e) {
e.originalColor = e.color;
});
// When a node is clicked, we check for each node
// if it is a neighbor of the clicked one. If not,
// we set its color as grey, and else, it takes its
// original color.
// We do the same for the edges, and we only keep
// edges that have both extremities colored.
s.bind('clickNode', function(e) {
var nodeId = e.data.node.id,
toKeep = s.graph.neighbors(nodeId);
toKeep[nodeId] = e.data.node;
s.graph.nodes().forEach(function(n) {
if (toKeep[n.id])
n.color = '#35a9f5';
else
n.color = '#dddddd';
});
s.graph.edges().forEach(function(e) {
if (toKeep[e.source] && toKeep[e.target])
e.color = '#35a9f5';
else
e.color = '#dddddd';
});
// Since the data has been modified, we need to
// call the refresh method to make the colors
// update effective.
s.refresh();
});
// When the stage is clicked, we just color each
// node and edge with its original color.
s.bind('clickStage', function(e) {
s.graph.nodes().forEach(function(n) {
n.color = n.originalColor;
});
s.graph.edges().forEach(function(e) {
e.color = e.originalColor;
});
// Same as in the previous event:
s.refresh();
});
s.bind("doubleClickNode", function (e) {
$("#canvas-wrap, .sigma-scene, .sigma-mouse").val();
ajax_load_page( e.data.node.page_url );
});
var c = s.camera;
s.bind("rightClickStage", function (e) {
sigma.misc.animation.camera(c, {
ratio: c.ratio * c.settings('zoomingRatio')
}, {
duration: 200
});
});
// Configure the noverlap layout:
var noverlapListener = s.configNoverlap({
nodeMargin: 10,
scaleNodes: 0.3,
gridSize: 1,
easing: 'quadraticInOut', // animation transition function
duration: 4000 // animation duration. Long here for the purposes of this example only
});
// Bind the events:
noverlapListener.bind('start stop interpolate', function(e) {
//console.log(e.type);
if(e.type === 'start') {
//console.time('noverlap');
}
if(e.type === 'interpolate') {
//console.timeEnd('noverlap');
}
});
// Start the layout:
s.startNoverlap();
//s.refresh();
// Initialize the dragNodes plugin:
var dragListener = sigma.plugins.dragNodes(s, s.renderers[0]);
dragListener.bind('startdrag', function(event) {
});
dragListener.bind('drag', function(event) {
});
dragListener.bind('drop', function(event) {
});
dragListener.bind('dragend', function(event) {
});