GUIDE
- Left-click and drag the background to move the graph
- Left-click and drag the nodes to reorganize
- Left-click a node to view first level connections
- Double left-click a node to navigate to its page
- Double left-click the background to zoom in
- Right-click the background to zoom out
sigma.utils.pkg('sigma.canvas.nodes');
sigma.canvas.nodes.image = (function() {
var _cache = {},
_loading = {},
_callbacks = {};
// Return the renderer itself:
var renderer = function(node, context, settings) {
var args = arguments,
prefix = settings('prefix') || '',
size = node[prefix + 'size'],
color = node.color || settings('defaultNodeColor'),
url = node.url;
if (_cache[url]) {
context.save();
// Draw the clipping disc:
context.beginPath();
context.arc(
node[prefix + 'x'],
node[prefix + 'y'],
node[prefix + 'size'],
0,
Math.PI * 2,
true
);
context.closePath();
context.clip();
// Draw the image
context.drawImage(
_cache[url],
node[prefix + 'x'] - size,
node[prefix + 'y'] - size,
2 * size,
2 * size
);
// Quit the "clipping mode":
context.restore();
// Draw the border:
context.beginPath();
context.arc(
node[prefix + 'x'],
node[prefix + 'y'],
node[prefix + 'size'],
0,
Math.PI * 2,
true
);
context.lineWidth = 1;
context.strokeStyle = node.color || settings('defaultNodeColor');
context.stroke();
} else {
sigma.canvas.nodes.image.cache(url);
sigma.canvas.nodes.def.apply(
sigma.canvas.nodes,
args
);
}
};
// Let's add a public method to cache images, to make it possible to
// preload images before the initial rendering:
renderer.cache = function(url, callback) {
if (callback)
_callbacks[url] = callback;
if (_loading[url])
return;
var img = new Image();
img.onload = function() {
_loading[url] = false;
_cache[url] = img;
if (_callbacks[url]) {
_callbacks[url].call(this, img);
delete _callbacks[url];
}
};
_loading[url] = true;
img.src = url;
};
return renderer;
})();
var i,
s,
o,
offset_left = 0.5,
N = 1,
E = 40,
C = 5,
d = 0.5,
cs = [],
g = {
nodes: [],
edges: []
};
if (!sigma.classes.graph.hasMethod('neighbors')){
sigma.classes.graph.addMethod('neighbors', function(nodeId) {
var k,
neighbors = {},
index = this.allNeighborsIndex[nodeId] || {};
for (k in index)
neighbors[k] = this.nodesIndex[k];
return neighbors;
});
}
//adding the central node
g.nodes.push({
id: 6150,
label: 'Structural Microbiology',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/05/research.pasteur.fr_structural-microbiology-150x150.jpg',
x: 0,
y: 0,
size: 30,
color: '#DDDDDD'
});
N=23
var x_node = Math.cos(2 * 0 * Math.PI / N) * 2;
var y_node = Math.sin(2 * 0 * Math.PI / N) * 2;
var biggest_node_size = 0;
//check if content already exist
x_site = Math.cos(2 * 0 * Math.PI / N) * 2;
y_site = Math.sin(2 * 0 * Math.PI / N) * 2;
// adding site
g.nodes.push({
id: 8419,
label: 'Stéphanie Petrella',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2019/02/research_pasteur-photo-sp-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/stephanie-petrella/',
x: x_site,
y: y_site,
size: 16,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 61508419,
size: 0.5,
source: 6150,
target: 8419 });
//check if content already exist
x_site = Math.cos(2 * 1 * Math.PI / N) * 2;
y_site = Math.sin(2 * 1 * Math.PI / N) * 2;
// adding site
g.nodes.push({
id: 3920,
label: 'Anne Marie Wehenkel',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2016/10/research.pasteur.fr_wehenkel_a-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/annemarie-wehenkel/',
x: x_site,
y: y_site,
size: 16,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 61503920,
size: 0.5,
source: 6150,
target: 3920 });
//check if content already exist
x_site = Math.cos(2 * 2 * Math.PI / N) * 2;
y_site = Math.sin(2 * 2 * Math.PI / N) * 2;
// adding site
g.nodes.push({
id: 3915,
label: 'Marco Bellinzoni',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/05/research_pasteur-marco-bellinzoni-img-0074-2-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/marco-bellinzoni/',
x: x_site,
y: y_site,
size: 16,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 61503915,
size: 0.5,
source: 6150,
target: 3915 });
//check if content already exist
x_site = Math.cos(2 * 3 * Math.PI / N) * 2;
y_site = Math.sin(2 * 3 * Math.PI / N) * 2;
// adding site
g.nodes.push({
id: 8380,
label: 'Mathilde Ben Assaya',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_mathilde-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/mathilde-ben-assaya/',
x: x_site,
y: y_site,
size: 16,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 61508380,
size: 0.5,
source: 6150,
target: 8380 });
//check if content already exist
x_site = Math.cos(2 * 4 * Math.PI / N) * 2;
y_site = Math.sin(2 * 4 * Math.PI / N) * 2;
// adding site
g.nodes.push({
id: 48532,
label: 'Mariano Martinez',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2020/05/research_pasteur-personal-photo-1-150x150.png',
page_url: 'https://research.pasteur.fr/en/member/mariano-martinez/',
x: x_site,
y: y_site,
size: 16,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 615048532,
size: 0.5,
source: 6150,
target: 48532 });
//check if content already exist
x_site = Math.cos(2 * 5 * Math.PI / N) * 2;
y_site = Math.sin(2 * 5 * Math.PI / N) * 2;
// adding site
g.nodes.push({
id: 4557,
label: 'Jean-Christophe Barale',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/09/research.pasteur.fr_photo_jcbarale-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/jean-christophe-barale/',
x: x_site,
y: y_site,
size: 16,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 61504557,
size: 0.5,
source: 6150,
target: 4557 });
//check if content already exist
x_site = Math.cos(2 * 6 * Math.PI / N) * 2;
y_site = Math.sin(2 * 6 * Math.PI / N) * 2;
// adding site
g.nodes.push({
id: 4563,
label: 'Anthony Bouillon',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2018/02/research_pasteur-anthony-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/anthony-bouillon/',
x: x_site,
y: y_site,
size: 16,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 61504563,
size: 0.5,
source: 6150,
target: 4563 });
//check if content already exist
x_site = Math.cos(2 * 7 * Math.PI / N) * 2;
y_site = Math.sin(2 * 7 * Math.PI / N) * 2;
// adding site
g.nodes.push({
id: 4613,
label: 'Edouard Yeramian',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2018/02/research_pasteur-edouard-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/edouard-yeramian/',
x: x_site,
y: y_site,
size: 16,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 61504613,
size: 0.5,
source: 6150,
target: 4613 });
//check if content already exist
x_site = Math.cos(2 * 8 * Math.PI / N) * 2;
y_site = Math.sin(2 * 8 * Math.PI / N) * 2;
// adding site
g.nodes.push({
id: 4315,
label: 'Francesca Gubellini',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2018/02/research_pasteur-francesca-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/francesca-gubellini/',
x: x_site,
y: y_site,
size: 16,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 61504315,
size: 0.5,
source: 6150,
target: 4315 });
//check if content already exist
x_site = Math.cos(2 * 9 * Math.PI / N) * 2;
y_site = Math.sin(2 * 9 * Math.PI / N) * 2;
// adding site
g.nodes.push({
id: 92036,
label: 'Marie De Tarragon',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/member/marie-de-tarragon/',
x: x_site,
y: y_site,
size: 16,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 615092036,
size: 0.5,
source: 6150,
target: 92036 });
//check if content already exist
x_site = Math.cos(2 * 10 * Math.PI / N) * 2;
y_site = Math.sin(2 * 10 * Math.PI / N) * 2;
// adding site
g.nodes.push({
id: 102687,
label: 'Quentin Gaday',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2020/05/research_pasteur-test1-2-150x150.png',
page_url: 'https://research.pasteur.fr/en/member/quentin-gaday/',
x: x_site,
y: y_site,
size: 16,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 6150102687,
size: 0.5,
source: 6150,
target: 102687 });
//check if content already exist
x_site = Math.cos(2 * 11 * Math.PI / N) * 2;
y_site = Math.sin(2 * 11 * Math.PI / N) * 2;
// adding site
g.nodes.push({
id: 126545,
label: 'Lu Yang',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/member/lu-yang/',
x: x_site,
y: y_site,
size: 16,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 6150126545,
size: 0.5,
source: 6150,
target: 126545 });
//check if content already exist
x_site = Math.cos(2 * 12 * Math.PI / N) * 2;
y_site = Math.sin(2 * 12 * Math.PI / N) * 2;
// adding site
g.nodes.push({
id: 139939,
label: 'Emilie Yab',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2020/03/research_pasteur-photo-pasteur-e1584390691108-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/emilie-yab/',
x: x_site,
y: y_site,
size: 16,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 6150139939,
size: 0.5,
source: 6150,
target: 139939 });
//check if content already exist
x_site = Math.cos(2 * 13 * Math.PI / N) * 2;
y_site = Math.sin(2 * 13 * Math.PI / N) * 2;
// adding site
g.nodes.push({
id: 141797,
label: 'Julienne Petit',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/member/julienne-petit/',
x: x_site,
y: y_site,
size: 16,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 6150141797,
size: 0.5,
source: 6150,
target: 141797 });
//check if content already exist
x_site = Math.cos(2 * 14 * Math.PI / N) * 2;
y_site = Math.sin(2 * 14 * Math.PI / N) * 2;
// adding site
g.nodes.push({
id: 149063,
label: 'Alexandra Boyko',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/member/alexandra-boyko/',
x: x_site,
y: y_site,
size: 16,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 6150149063,
size: 0.5,
source: 6150,
target: 149063 });
//check if content already exist
x_site = Math.cos(2 * 15 * Math.PI / N) * 2;
y_site = Math.sin(2 * 15 * Math.PI / N) * 2;
// adding site
g.nodes.push({
id: 149068,
label: 'Fernando Batista',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/member/fernando-batista/',
x: x_site,
y: y_site,
size: 16,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 6150149068,
size: 0.5,
source: 6150,
target: 149068 });
//check if content already exist
x_site = Math.cos(2 * 16 * Math.PI / N) * 2;
y_site = Math.sin(2 * 16 * Math.PI / N) * 2;
// adding site
g.nodes.push({
id: 150431,
label: 'Mélissa Mairet-Khedim',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/member/melissa-mairet-khedim/',
x: x_site,
y: y_site,
size: 16,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 6150150431,
size: 0.5,
source: 6150,
target: 150431 });
//check if content already exist
x_site = Math.cos(2 * 17 * Math.PI / N) * 2;
y_site = Math.sin(2 * 17 * Math.PI / N) * 2;
// adding site
g.nodes.push({
id: 162154,
label: 'Daniela Megrian Nunez',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/member/daniela-megrian-nunez/',
x: x_site,
y: y_site,
size: 16,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 6150162154,
size: 0.5,
source: 6150,
target: 162154 });
//check if content already exist
x_site = Math.cos(2 * 18 * Math.PI / N) * 2;
y_site = Math.sin(2 * 18 * Math.PI / N) * 2;
// adding site
g.nodes.push({
id: 162144,
label: 'Chloé Leblond',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/member/chloe-leblond/',
x: x_site,
y: y_site,
size: 16,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 6150162144,
size: 0.5,
source: 6150,
target: 162144 });
//check if content already exist
x_site = Math.cos(2 * 19 * Math.PI / N) * 2;
y_site = Math.sin(2 * 19 * Math.PI / N) * 2;
// adding site
g.nodes.push({
id: 162147,
label: 'Clara Pigozzo',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/member/clara-pigozzo/',
x: x_site,
y: y_site,
size: 16,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 6150162147,
size: 0.5,
source: 6150,
target: 162147 });
//check if content already exist
x_site = Math.cos(2 * 20 * Math.PI / N) * 2;
y_site = Math.sin(2 * 20 * Math.PI / N) * 2;
// adding site
g.nodes.push({
id: 162150,
label: 'Ek-Tchay Pov',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/member/ek-tchay-pov/',
x: x_site,
y: y_site,
size: 16,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 6150162150,
size: 0.5,
source: 6150,
target: 162150 });
//check if content already exist
x_site = Math.cos(2 * 21 * Math.PI / N) * 2;
y_site = Math.sin(2 * 21 * Math.PI / N) * 2;
// adding site
g.nodes.push({
id: 162152,
label: 'Bohdana Sokolova',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/member/bohdana-sokolova/',
x: x_site,
y: y_site,
size: 16,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 6150162152,
size: 0.5,
source: 6150,
target: 162152 });
//check if content already exist
x_site = Math.cos(2 * 22 * Math.PI / N) * 2;
y_site = Math.sin(2 * 22 * Math.PI / N) * 2;
// adding site
g.nodes.push({
id: 2487,
label: 'Pedro Alzari',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/03/palzari-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/pedro-alzari/',
x: x_site,
y: y_site,
size: 16,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 61502487,
size: 0.5,
source: 6150,
target: 2487 });
// update positions
x_node = Math.cos(2 * 0 * Math.PI / N) * 10;
y_node = Math.sin(2 * 0 * Math.PI / N) * 10;
N=19
// adding node
var x_node = Math.cos(2 * 0 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 0 * Math.PI / N) * 10;
g.nodes.push({
id: 143534,
label: 'EVENT: Molecular mechanisms of corynebacterial cell division and elongation – HDR Defense – Anne Marie Wehenkel',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/event/molecular-mechanisms-of-corynebacterial-cell-division-and-elongation-hdr-defense-anne-marie-wehenkel/',
size: 24,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 6150143534,
size: 0.5,
source: 6150,
target: 143534 });
// adding node
var x_node = Math.cos(2 * 1 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 1 * Math.PI / N) * 10;
g.nodes.push({
id: 139261,
label: 'EVENT: EMBO Workshop on Tuberculosis 2020 postponed to September 2022',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/event/embo-workshop-on-tuberculosis-2020/',
size: 24,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 6150139261,
size: 0.5,
source: 6150,
target: 139261 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 3992,
label: 'Roland Brosch',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/12/research.pasteur.fr_roland1-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/roland-brosch/',
x: x_site,
y: y_site,
size: 10,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 1392613992,
size: 0.5,
source: 139261,
target: 3992 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 2487) {
n.size = n.size + 10;
if ( n.size > biggest_node_size ){
biggest_node_size = n.size;
}
}
});
g.nodes.forEach(function(n) {
if (n.id == 6150) {
if ( n.size < biggest_node_size ){
n.size = biggest_node_size;
}
}
});
//link to content
g.edges.push({
id: 1392612487,
size: 0.5,
source: 139261,
target: 2487 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 6368,
label: 'Giulia Manina',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/05/research_pasteur-giulia-manina-giulia-manina-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/giulia-manina/',
x: x_site,
y: y_site,
size: 10,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 1392616368,
size: 0.5,
source: 139261,
target: 6368 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 122454,
label: 'Elodie Pysson',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/member/elodie-pysson/',
x: x_site,
y: y_site,
size: 10,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 139261122454,
size: 0.5,
source: 139261,
target: 122454 });
// adding node
var x_node = Math.cos(2 * 2 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 2 * Math.PI / N) * 10;
g.nodes.push({
id: 126570,
label: 'PROJECT: METACTINO',
x: x_node,
y: y_node,
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2019/05/research_pasteur-supercplx_shema_new-150x150.png',
page_url: 'https://research.pasteur.fr/en/project/metactino/',
size: 24,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 6150126570,
size: 0.5,
source: 6150,
target: 126570 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 126545) {
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label: 'Frédéric Barras',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2018/04/research_pasteur-f-barras-1-150x150.png',
page_url: 'https://research.pasteur.fr/en/member/frederic-barras/',
x: x_site,
y: y_site,
size: 10,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 22103214,
size: 0.5,
source: 22,
target: 103214 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4214,
label: 'Bruno Dupuy',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/09/research.pasteur.fr_bruno_id-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/bruno-dupuy/',
x: x_site,
y: y_site,
size: 10,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 224214,
size: 0.5,
source: 22,
target: 4214 });
// adding node
var x_node = Math.cos(2 * 16 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 16 * Math.PI / N) * 10;
g.nodes.push({
id: 24367,
label: 'TEAM: Type II topoisomerases challenges',
x: x_node,
y: y_node,
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/05/research.pasteur.fr_structural-microbiology-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/team/group-claudine-mayer/',
size: 24,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 615024367,
size: 0.5,
source: 6150,
target: 24367 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 8419) {
n.size = n.size + 10;
if ( n.size > biggest_node_size ){
biggest_node_size = n.size;
}
}
});
g.nodes.forEach(function(n) {
if (n.id == 6150) {
if ( n.size < biggest_node_size ){
n.size = biggest_node_size;
}
}
});
//link to content
g.edges.push({
id: 243678419,
size: 0.5,
source: 24367,
target: 8419 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 3913) {
n.size = n.size + 10;
if ( n.size > biggest_node_size ){
biggest_node_size = n.size;
}
}
});
g.nodes.forEach(function(n) {
if (n.id == 6150) {
if ( n.size < biggest_node_size ){
n.size = biggest_node_size;
}
}
});
//link to content
g.edges.push({
id: 243673913,
size: 0.5,
source: 24367,
target: 3913 });
// adding node
var x_node = Math.cos(2 * 17 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 17 * Math.PI / N) * 10;
g.nodes.push({
id: 24150,
label: 'TEAM: Structural biology of metabolic enzymes and complexes',
x: x_node,
y: y_node,
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/05/research.pasteur.fr_structural-microbiology-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/team/group-marco-bellinzoni/',
size: 24,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 615024150,
size: 0.5,
source: 6150,
target: 24150 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 126545) {
n.size = n.size + 10;
if ( n.size > biggest_node_size ){
biggest_node_size = n.size;
}
}
});
g.nodes.forEach(function(n) {
if (n.id == 6150) {
if ( n.size < biggest_node_size ){
n.size = biggest_node_size;
}
}
});
//link to content
g.edges.push({
id: 24150126545,
size: 0.5,
source: 24150,
target: 126545 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 149063) {
n.size = n.size + 10;
if ( n.size > biggest_node_size ){
biggest_node_size = n.size;
}
}
});
g.nodes.forEach(function(n) {
if (n.id == 6150) {
if ( n.size < biggest_node_size ){
n.size = biggest_node_size;
}
}
});
//link to content
g.edges.push({
id: 24150149063,
size: 0.5,
source: 24150,
target: 149063 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 3915) {
n.size = n.size + 10;
if ( n.size > biggest_node_size ){
biggest_node_size = n.size;
}
}
});
g.nodes.forEach(function(n) {
if (n.id == 6150) {
if ( n.size < biggest_node_size ){
n.size = biggest_node_size;
}
}
});
//link to content
g.edges.push({
id: 241503915,
size: 0.5,
source: 24150,
target: 3915 });
// adding node
var x_node = Math.cos(2 * 18 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 18 * Math.PI / N) * 10;
g.nodes.push({
id: 24134,
label: 'TEAM: Biology of Malaria targets and Antimalarials',
x: x_node,
y: y_node,
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/05/research.pasteur.fr_malaria-biology-and-genetics-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/team/group-jean-christophe-barale/',
size: 24,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 615024134,
size: 0.5,
source: 6150,
target: 24134 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4563) {
n.size = n.size + 10;
if ( n.size > biggest_node_size ){
biggest_node_size = n.size;
}
}
});
g.nodes.forEach(function(n) {
if (n.id == 6150) {
if ( n.size < biggest_node_size ){
n.size = biggest_node_size;
}
}
});
//link to content
g.edges.push({
id: 241344563,
size: 0.5,
source: 24134,
target: 4563 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 103560,
label: 'Selma Topçu',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2018/02/research_pasteur-selma-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/selma-topcu-2/',
x: x_site,
y: y_site,
size: 10,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 24134103560,
size: 0.5,
source: 24134,
target: 103560 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4557) {
n.size = n.size + 10;
if ( n.size > biggest_node_size ){
biggest_node_size = n.size;
}
}
});
g.nodes.forEach(function(n) {
if (n.id == 6150) {
if ( n.size < biggest_node_size ){
n.size = biggest_node_size;
}
}
});
//link to content
g.edges.push({
id: 241344557,
size: 0.5,
source: 24134,
target: 4557 });
var s = new sigma({
//container: document.getElementById('graph-main'),
graph: g,
renderer: {
// IMPORTANT:
// This works only with the canvas renderer, so the
// renderer type set as "canvas" is necessary here.
container: document.getElementById('graph-main'),
type: 'canvas'
},
settings: {
minNodeSize: 12,
maxNodeSize: 30,
mouseWheelEnabled: false,
font: 'Montserrat',
labelThreshold:25,
borderSize:1,
defaultNodeBorderColor: '#333',
sideMargin:25,
}
});
// We first need to save the original colors of our
// nodes and edges, like this:
s.graph.nodes().forEach(function(n) {
n.originalColor = n.color;
//console.log(n.id);
//console.log(s.graph.nodes(n.id));
});
s.graph.edges().forEach(function(e) {
e.originalColor = e.color;
});
// When a node is clicked, we check for each node
// if it is a neighbor of the clicked one. If not,
// we set its color as grey, and else, it takes its
// original color.
// We do the same for the edges, and we only keep
// edges that have both extremities colored.
s.bind('clickNode', function(e) {
var nodeId = e.data.node.id,
toKeep = s.graph.neighbors(nodeId);
toKeep[nodeId] = e.data.node;
s.graph.nodes().forEach(function(n) {
if (toKeep[n.id])
n.color = '#35a9f5';
else
n.color = '#dddddd';
});
s.graph.edges().forEach(function(e) {
if (toKeep[e.source] && toKeep[e.target])
e.color = '#35a9f5';
else
e.color = '#dddddd';
});
// Since the data has been modified, we need to
// call the refresh method to make the colors
// update effective.
s.refresh();
});
// When the stage is clicked, we just color each
// node and edge with its original color.
s.bind('clickStage', function(e) {
s.graph.nodes().forEach(function(n) {
n.color = n.originalColor;
});
s.graph.edges().forEach(function(e) {
e.color = e.originalColor;
});
// Same as in the previous event:
s.refresh();
});
s.bind("doubleClickNode", function (e) {
$("#canvas-wrap, .sigma-scene, .sigma-mouse").val();
ajax_load_page( e.data.node.page_url );
});
var c = s.camera;
s.bind("rightClickStage", function (e) {
sigma.misc.animation.camera(c, {
ratio: c.ratio * c.settings('zoomingRatio')
}, {
duration: 200
});
});
// Configure the noverlap layout:
var noverlapListener = s.configNoverlap({
nodeMargin: 10,
scaleNodes: 0.3,
gridSize: 1,
easing: 'quadraticInOut', // animation transition function
duration: 4000 // animation duration. Long here for the purposes of this example only
});
// Bind the events:
noverlapListener.bind('start stop interpolate', function(e) {
//console.log(e.type);
if(e.type === 'start') {
//console.time('noverlap');
}
if(e.type === 'interpolate') {
//console.timeEnd('noverlap');
}
});
// Start the layout:
s.startNoverlap();
//s.refresh();
// Initialize the dragNodes plugin:
var dragListener = sigma.plugins.dragNodes(s, s.renderers[0]);
dragListener.bind('startdrag', function(event) {
});
dragListener.bind('drag', function(event) {
});
dragListener.bind('drop', function(event) {
});
dragListener.bind('dragend', function(event) {
});