GUIDE
- Left-click and drag the background to move the graph
- Left-click and drag the nodes to reorganize
- Left-click a node to view first level connections
- Double left-click a node to navigate to its page
- Double left-click the background to zoom in
- Right-click the background to zoom out
sigma.utils.pkg('sigma.canvas.nodes');
sigma.canvas.nodes.image = (function() {
var _cache = {},
_loading = {},
_callbacks = {};
// Return the renderer itself:
var renderer = function(node, context, settings) {
var args = arguments,
prefix = settings('prefix') || '',
size = node[prefix + 'size'],
color = node.color || settings('defaultNodeColor'),
url = node.url;
if (_cache[url]) {
context.save();
// Draw the clipping disc:
context.beginPath();
context.arc(
node[prefix + 'x'],
node[prefix + 'y'],
node[prefix + 'size'],
0,
Math.PI * 2,
true
);
context.closePath();
context.clip();
// Draw the image
context.drawImage(
_cache[url],
node[prefix + 'x'] - size,
node[prefix + 'y'] - size,
2 * size,
2 * size
);
// Quit the "clipping mode":
context.restore();
// Draw the border:
context.beginPath();
context.arc(
node[prefix + 'x'],
node[prefix + 'y'],
node[prefix + 'size'],
0,
Math.PI * 2,
true
);
context.lineWidth = 1;
context.strokeStyle = node.color || settings('defaultNodeColor');
context.stroke();
} else {
sigma.canvas.nodes.image.cache(url);
sigma.canvas.nodes.def.apply(
sigma.canvas.nodes,
args
);
}
};
// Let's add a public method to cache images, to make it possible to
// preload images before the initial rendering:
renderer.cache = function(url, callback) {
if (callback)
_callbacks[url] = callback;
if (_loading[url])
return;
var img = new Image();
img.onload = function() {
_loading[url] = false;
_cache[url] = img;
if (_callbacks[url]) {
_callbacks[url].call(this, img);
delete _callbacks[url];
}
};
_loading[url] = true;
img.src = url;
};
return renderer;
})();
var i,
s,
o,
offset_left = 0.5,
N = 1,
E = 40,
C = 5,
d = 0.5,
cs = [],
g = {
nodes: [],
edges: []
};
if (!sigma.classes.graph.hasMethod('neighbors')){
sigma.classes.graph.addMethod('neighbors', function(nodeId) {
var k,
neighbors = {},
index = this.allNeighborsIndex[nodeId] || {};
for (k in index)
neighbors[k] = this.nodesIndex[k];
return neighbors;
});
}
//adding the central node
g.nodes.push({
id: 4589,
label: 'Laurence Mulard',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_fig5-150x150.jpeg',
x: 0,
y: 0,
size: 30,
color: '#DDDDDD'
});
var biggest_node_size = 0;
N=12
// adding node
var x_node = Math.cos(2 * 0 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 0 * Math.PI / N) * 10;
g.nodes.push({
id: 112573,
label: 'PROJECT: GlycoShig1',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/project/glycoshig1/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 4589112573,
size: 0.5,
source: 4589,
target: 112573,
});
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 112554,
label: 'Marion Bouchet',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/member/marion-bouchet/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 112573112554,
size: 0.5,
source: 112573,
target: 112554 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 112551,
label: 'Debashis Dhara',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/member/debashis-dhara/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 112573112551,
size: 0.5,
source: 112573,
target: 112551 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 8300,
label: 'Catherine Guerreiro Inverno',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/member/catherine-guerreiro-inverno/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 1125738300,
size: 0.5,
source: 112573,
target: 8300 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4790,
label: 'Armelle Phalipon',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_phalipon-150x150.jpeg',
page_url: 'https://research.pasteur.fr/en/member/armelle-phalipon/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 1125734790,
size: 0.5,
source: 112573,
target: 4790 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4589) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 1125734589,
size: 0.5,
source: 112573,
target: 4589 });
// adding node
var x_node = Math.cos(2 * 1 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 1 * Math.PI / N) * 10;
g.nodes.push({
id: 112571,
label: 'PATENT: Protected tetrasaccharides, their preparation and their use in the synthesis of bacterial oligosaccharides',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/patent/protected-tetrasaccharides-their-preparation-and-their-use-in-the-synthesis-of-bacterial-oligosaccharides/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 4589112571,
size: 0.5,
source: 4589,
target: 112571,
});
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4591,
label: 'Guillaume Le Heiget',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/?post_type=member&p=4591',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 1125714591,
size: 0.5,
source: 112571,
target: 4591 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4587,
label: 'Zhaoyu Hu',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/?post_type=member&p=4587',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 1125714587,
size: 0.5,
source: 112571,
target: 4587 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 79272,
label: 'Louis-Antoine Barel',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/member/louis-antoine-barel/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 11257179272,
size: 0.5,
source: 112571,
target: 79272 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4589) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 1125714589,
size: 0.5,
source: 112571,
target: 4589 });
// adding node
var x_node = Math.cos(2 * 2 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 2 * Math.PI / N) * 10;
g.nodes.push({
id: 112569,
label: 'PATENT: Glycoconjugates and their use as potential vaccines against infection by Shigella flexneri (SF6)',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/patent/glycoconjugates-and-their-use-as-potential-vaccines-against-infection-by-shigella-flexneri-sf6/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 4589112569,
size: 0.5,
source: 4589,
target: 112569,
});
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 3087,
label: 'Farida Nato',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/?post_type=member&p=3087',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 1125693087,
size: 0.5,
source: 112569,
target: 3087 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4790) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 1125694790,
size: 0.5,
source: 112569,
target: 4790 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4780,
label: 'Philippe Sansonetti',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/06/research.pasteur.fr_philippe-sansonetti-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/philippe-sansonetti__trashed/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 1125694780,
size: 0.5,
source: 112569,
target: 4780 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 2189,
label: 'François Traincard',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/?post_type=member&p=2189',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 1125692189,
size: 0.5,
source: 112569,
target: 2189 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4589) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 1125694589,
size: 0.5,
source: 112569,
target: 4589 });
// adding node
var x_node = Math.cos(2 * 3 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 3 * Math.PI / N) * 10;
g.nodes.push({
id: 112566,
label: 'PATENT: Glycoconjugates and use thereof as vaccines against Shigella flexneri serotype 3a and X',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/patent/glycoconjugates-and-use-thereof-as-vaccines-against-shigella-flexneri-serotype-3a-and-x/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 4589112566,
size: 0.5,
source: 4589,
target: 112566,
});
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 8300) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 1125668300,
size: 0.5,
source: 112566,
target: 8300 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 3087) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 1125663087,
size: 0.5,
source: 112566,
target: 3087 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4790) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 1125664790,
size: 0.5,
source: 112566,
target: 4790 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4780) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 1125664780,
size: 0.5,
source: 112566,
target: 4780 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4589) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 1125664589,
size: 0.5,
source: 112566,
target: 4589 });
// adding node
var x_node = Math.cos(2 * 4 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 4 * Math.PI / N) * 10;
g.nodes.push({
id: 112564,
label: 'PATENT: Glycoconjugates and their use as potential vaccines against infection by Shigella flexneri',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/patent/glycoconjugates-and-their-use-as-potential-vaccines-against-infection-by-shigella-flexneri/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 4589112564,
size: 0.5,
source: 4589,
target: 112564,
});
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4585,
label: 'Françoise Baleux',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/?post_type=member&p=4585',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 1125644585,
size: 0.5,
source: 112564,
target: 4585 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 3087) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 1125643087,
size: 0.5,
source: 112564,
target: 3087 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4790) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 1125644790,
size: 0.5,
source: 112564,
target: 4790 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4780) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 1125644780,
size: 0.5,
source: 112564,
target: 4780 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4589) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 1125644589,
size: 0.5,
source: 112564,
target: 4589 });
// adding node
var x_node = Math.cos(2 * 5 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 5 * Math.PI / N) * 10;
g.nodes.push({
id: 71242,
label: 'TEAM: Group: Carbohydrates and Bioconjugates',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/team/group-laurence-mulard/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 458971242,
size: 0.5,
source: 4589,
target: 71242,
});
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 79272) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 7124279272,
size: 0.5,
source: 71242,
target: 79272 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 79267,
label: 'Johan Cornil',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/member/johan-cornil/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 7124279267,
size: 0.5,
source: 71242,
target: 79267 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 8300) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 712428300,
size: 0.5,
source: 71242,
target: 8300 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4591) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 712424591,
size: 0.5,
source: 71242,
target: 4591 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4589) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 712424589,
size: 0.5,
source: 71242,
target: 4589 });
// adding node
var x_node = Math.cos(2 * 6 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 6 * Math.PI / N) * 10;
g.nodes.push({
id: 45353,
label: 'PROJECT: A synthetic carbohydrate-based conjugate vaccine ready for a clinical trial',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/project/a-synthetic-carbohydrate-based-conjugate-vaccine-ready-for-a-clinical-trial/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 458945353,
size: 0.5,
source: 4589,
target: 45353,
});
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4589) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 453534589,
size: 0.5,
source: 45353,
target: 4589 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4790) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 453534790,
size: 0.5,
source: 45353,
target: 4790 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 7884,
label: 'Cécile Artaud',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/05/research_pasteur-cecile-artaud-dsc7491-e1512645021182-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/cecile-artaud/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 453537884,
size: 0.5,
source: 45353,
target: 7884 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4780) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 453534780,
size: 0.5,
source: 45353,
target: 4780 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 8300) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 453538300,
size: 0.5,
source: 45353,
target: 8300 });
// adding node
var x_node = Math.cos(2 * 7 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 7 * Math.PI / N) * 10;
g.nodes.push({
id: 67050,
label: 'PROJECT: FlexBiVac',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/project/flexbivac/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 458967050,
size: 0.5,
source: 4589,
target: 67050,
});
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 1022,
label: 'Patrick England',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/03/Patrick1-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/patrick-england/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 670501022,
size: 0.5,
source: 67050,
target: 1022 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4790) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 670504790,
size: 0.5,
source: 67050,
target: 4790 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4589) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 670504589,
size: 0.5,
source: 67050,
target: 4589 });
// adding node
var x_node = Math.cos(2 * 8 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 8 * Math.PI / N) * 10;
g.nodes.push({
id: 45347,
label: 'PROJECT: CarbUniVax',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/project/carbunivax/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 458945347,
size: 0.5,
source: 4589,
target: 45347,
});
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4790) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 453474790,
size: 0.5,
source: 45347,
target: 4790 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 1022) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 453471022,
size: 0.5,
source: 45347,
target: 1022 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4589) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 453474589,
size: 0.5,
source: 45347,
target: 4589 });
// adding node
var x_node = Math.cos(2 * 9 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 9 * Math.PI / N) * 10;
g.nodes.push({
id: 21000,
label: 'PROJECT: Synthesis of peptide and protein conjugates towards novel therapeutics and/or diagnostic tools',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/project/synthesis-of-peptide-and-protein-conjugates-towards-novel-therapeutics-andor-diagnostic-tools/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 458921000,
size: 0.5,
source: 4589,
target: 21000,
});
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4589) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 210004589,
size: 0.5,
source: 21000,
target: 4589 });
// adding node
var x_node = Math.cos(2 * 10 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 10 * Math.PI / N) * 10;
g.nodes.push({
id: 20116,
label: 'PROJECT: Carbohydrates as targets of immunity: their synthesis, antibody recognition and use as key vaccine components',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/project/chemistry-of-biomolecules__trashed/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 458920116,
size: 0.5,
source: 4589,
target: 20116,
});
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4589) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 201164589,
size: 0.5,
source: 20116,
target: 4589 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 8300) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 201168300,
size: 0.5,
source: 20116,
target: 8300 });
// adding node
var x_node = Math.cos(2 * 11 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 11 * Math.PI / N) * 10;
g.nodes.push({
id: 6152,
label: 'TEAM: Chemistry of Biomolecules',
x: x_node,
y: y_node,
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_institutpasteur_383851-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/team/chemistry-of-biomolecules/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 45896152,
size: 0.5,
source: 4589,
target: 6152,
});
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4586,
label: 'Sylvie Bay',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/11/research.pasteur.fr_sylviebay-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/sylvie-bay/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 61524586,
size: 0.5,
source: 6152,
target: 4586 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 112554) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 6152112554,
size: 0.5,
source: 6152,
target: 112554 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4592,
label: 'Yves-Marie Coic',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/member/yves-marie-coic/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 61524592,
size: 0.5,
source: 6152,
target: 4592 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 79267) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 615279267,
size: 0.5,
source: 6152,
target: 79267 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 8298,
label: 'Christelle Ganneau',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/11/research.pasteur.fr_dscn3897b-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/christelle-ganneau/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 61528298,
size: 0.5,
source: 6152,
target: 8298 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 8300) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 61528300,
size: 0.5,
source: 6152,
target: 8300 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 8302,
label: 'Marie-Ange Garnier',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_img_47534-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/marie-ange-garnier/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 61528302,
size: 0.5,
source: 6152,
target: 8302 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 153127,
label: 'Marielle Tamigney-Kenfack',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/member/marielle-tamigney-kenfack/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 6152153127,
size: 0.5,
source: 6152,
target: 153127 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 168431,
label: 'Teresa Piechowiak',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/member/teresa-piechowiak/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 6152168431,
size: 0.5,
source: 6152,
target: 168431 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 211044,
label: 'Marie-Claire Jiang',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/member/marie-claire-jiang/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 6152211044,
size: 0.5,
source: 6152,
target: 211044 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 211051,
label: 'Emma Melotti',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/member/emma-melotti/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 6152211051,
size: 0.5,
source: 6152,
target: 211051 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 219341,
label: 'Marc Borie-Guichot',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/member/marc-borie-guichot/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 6152219341,
size: 0.5,
source: 6152,
target: 219341 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4589) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 61524589,
size: 0.5,
source: 6152,
target: 4589 });
var s = new sigma({
//container: document.getElementById('graph-main'),
graph: g,
renderer: {
// IMPORTANT:
// This works only with the canvas renderer, so the
// renderer type set as "canvas" is necessary here.
container: document.getElementById('graph-main'),
type: 'canvas'
},
settings: {
minNodeSize: 6,
maxNodeSize: 35,
mouseWheelEnabled: false,
font: 'Montserrat',
labelThreshold:25,
borderSize:1,
defaultNodeBorderColor: '#999',
sideMargin:25,
}
});
// We first need to save the original colors of our
// nodes and edges, like this:
s.graph.nodes().forEach(function(n) {
n.originalColor = n.color;
});
s.graph.edges().forEach(function(e) {
e.originalColor = e.color;
});
// When a node is clicked, we check for each node
// if it is a neighbor of the clicked one. If not,
// we set its color as grey, and else, it takes its
// original color.
// We do the same for the edges, and we only keep
// edges that have both extremities colored.
s.bind('clickNode', function(e) {
var nodeId = e.data.node.id,
toKeep = s.graph.neighbors(nodeId);
toKeep[nodeId] = e.data.node;
s.graph.nodes().forEach(function(n) {
if (toKeep[n.id])
n.color = '#35a9f5';
else
n.color = '#dddddd';
});
s.graph.edges().forEach(function(e) {
if (toKeep[e.source] && toKeep[e.target])
e.color = '#35a9f5';
else
e.color = '#dddddd';
});
// Since the data has been modified, we need to
// call the refresh method to make the colors
// update effective.
s.refresh();
});
// When the stage is clicked, we just color each
// node and edge with its original color.
s.bind('clickStage', function(e) {
s.graph.nodes().forEach(function(n) {
n.color = n.originalColor;
});
s.graph.edges().forEach(function(e) {
e.color = e.originalColor;
});
// Same as in the previous event:
s.refresh();
});
s.bind("doubleClickNode", function (e) {
$("#canvas-wrap, .sigma-scene, .sigma-mouse").val();
ajax_load_page( e.data.node.page_url );
});
var c = s.camera;
s.bind("rightClickStage", function (e) {
sigma.misc.animation.camera(c, {
ratio: c.ratio * c.settings('zoomingRatio')
}, {
duration: 200
});
});
// Configure the noverlap layout:
var noverlapListener = s.configNoverlap({
nodeMargin: 10,
scaleNodes: 0.3,
gridSize: 1,
easing: 'quadraticInOut', // animation transition function
duration: 4000 // animation duration. Long here for the purposes of this example only
});
// Bind the events:
noverlapListener.bind('start stop interpolate', function(e) {
//console.log(e.type);
if(e.type === 'start') {
//console.time('noverlap');
}
if(e.type === 'interpolate') {
//console.timeEnd('noverlap');
}
});
// Start the layout:
s.startNoverlap();
//s.refresh();
// Initialize the dragNodes plugin:
var dragListener = sigma.plugins.dragNodes(s, s.renderers[0]);
dragListener.bind('startdrag', function(event) {
});
dragListener.bind('drag', function(event) {
});
dragListener.bind('drop', function(event) {
});
dragListener.bind('dragend', function(event) {
});