GUIDE
- Left-click and drag the background to move the graph
- Left-click and drag the nodes to reorganize
- Left-click a node to view first level connections
- Double left-click a node to navigate to its page
- Double left-click the background to zoom in
- Right-click the background to zoom out
sigma.utils.pkg('sigma.canvas.nodes');
sigma.canvas.nodes.image = (function() {
var _cache = {},
_loading = {},
_callbacks = {};
// Return the renderer itself:
var renderer = function(node, context, settings) {
var args = arguments,
prefix = settings('prefix') || '',
size = node[prefix + 'size'],
color = node.color || settings('defaultNodeColor'),
url = node.url;
if (_cache[url]) {
context.save();
// Draw the clipping disc:
context.beginPath();
context.arc(
node[prefix + 'x'],
node[prefix + 'y'],
node[prefix + 'size'],
0,
Math.PI * 2,
true
);
context.closePath();
context.clip();
// Draw the image
context.drawImage(
_cache[url],
node[prefix + 'x'] - size,
node[prefix + 'y'] - size,
2 * size,
2 * size
);
// Quit the "clipping mode":
context.restore();
// Draw the border:
context.beginPath();
context.arc(
node[prefix + 'x'],
node[prefix + 'y'],
node[prefix + 'size'],
0,
Math.PI * 2,
true
);
context.lineWidth = 1;
context.strokeStyle = node.color || settings('defaultNodeColor');
context.stroke();
} else {
sigma.canvas.nodes.image.cache(url);
sigma.canvas.nodes.def.apply(
sigma.canvas.nodes,
args
);
}
};
// Let's add a public method to cache images, to make it possible to
// preload images before the initial rendering:
renderer.cache = function(url, callback) {
if (callback)
_callbacks[url] = callback;
if (_loading[url])
return;
var img = new Image();
img.onload = function() {
_loading[url] = false;
_cache[url] = img;
if (_callbacks[url]) {
_callbacks[url].call(this, img);
delete _callbacks[url];
}
};
_loading[url] = true;
img.src = url;
};
return renderer;
})();
var i,
s,
o,
offset_left = 0.5,
N = 1,
E = 40,
C = 5,
d = 0.5,
cs = [],
g = {
nodes: [],
edges: []
};
if (!sigma.classes.graph.hasMethod('neighbors')){
sigma.classes.graph.addMethod('neighbors', function(nodeId) {
var k,
neighbors = {},
index = this.allNeighborsIndex[nodeId] || {};
for (k in index)
neighbors[k] = this.nodesIndex[k];
return neighbors;
});
}
//adding the central node
g.nodes.push({
id: 4523,
label: 'Morgane Besson',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2017/07/research_pasteur-capture-decran-2017-07-22-a-17.21.36-150x150.png',
x: 0,
y: 0,
size: 30,
color: '#DDDDDD'
});
var biggest_node_size = 0;
N=10
// adding node
var x_node = Math.cos(2 * 0 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 0 * Math.PI / N) * 10;
g.nodes.push({
id: 238006,
label: 'TEAM: Vulnerability to mental disorders',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/team/vulnerability-to-mental-disorders/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 4523238006,
size: 0.5,
source: 4523,
target: 238006,
});
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 168320,
label: 'Chloe Bouarab',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2021/10/research_pasteur-chloe-bouarab-chloe-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/chloe-bouarab/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 238006168320,
size: 0.5,
source: 238006,
target: 168320 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 188804,
label: 'Yago Pazos Boubeta',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2022/10/research_pasteur-yago-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/yago-pazos-boubeta/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 238006188804,
size: 0.5,
source: 238006,
target: 188804 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 237491,
label: 'Sandrine DURAND',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/member/sandrine-durand/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 238006237491,
size: 0.5,
source: 238006,
target: 237491 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 86249,
label: 'Anaïs Victoire',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2017/02/research_pasteur-anais-victoire-photo-didentite-2024-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/anais-victoire/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 23800686249,
size: 0.5,
source: 238006,
target: 86249 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4523) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 2380064523,
size: 0.5,
source: 238006,
target: 4523 });
// adding node
var x_node = Math.cos(2 * 1 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 1 * Math.PI / N) * 10;
g.nodes.push({
id: 174659,
label: 'EVENT: Neuroscience Seminar Series “VGLUT3-p.T8I a rare variant that alters striatal cholinergic transmission; impact on addiction and eating disorders.”',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/event/neuroscience-seminar-series-vglut3-p-t8i-a-rare-variant-that-alters-striatal-cholinergic-transmission-impact-on-addiction-and-eating-disorders/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 4523174659,
size: 0.5,
source: 4523,
target: 174659,
});
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4523) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 1746594523,
size: 0.5,
source: 174659,
target: 4523 });
// adding node
var x_node = Math.cos(2 * 2 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 2 * Math.PI / N) * 10;
g.nodes.push({
id: 156478,
label: 'EVENT: Neuroscience Seminar Series : “Neuronal plasticity, neurotrophin signaling and the antidepressant effect”, Eero Castrén',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/event/neuroscience-seminar-series-neuronal-plasticity-neurotrophin-signaling-and-the-antidepressant-effect-eero-castren/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 4523156478,
size: 0.5,
source: 4523,
target: 156478,
});
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4523) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 1564784523,
size: 0.5,
source: 156478,
target: 4523 });
// adding node
var x_node = Math.cos(2 * 3 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 3 * Math.PI / N) * 10;
g.nodes.push({
id: 149549,
label: 'NEWS: Cocaine addiction: impact of genetic mutations elucidated',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/news/cocaine-addiction-impact-of-genetic-mutations-elucidated/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 4523149549,
size: 0.5,
source: 4523,
target: 149549,
});
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 3801,
label: 'Uwe Maskos',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/12/research.pasteur.fr_um_1-3-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/uwe-maskos/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 1495493801,
size: 0.5,
source: 149549,
target: 3801 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4523) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 1495494523,
size: 0.5,
source: 149549,
target: 4523 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4525,
label: 'Benoît Forget',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/09/research.pasteur.fr_picturebencv-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/benoit-forget/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 1495494525,
size: 0.5,
source: 149549,
target: 4525 });
// adding node
var x_node = Math.cos(2 * 4 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 4 * Math.PI / N) * 10;
g.nodes.push({
id: 104445,
label: 'PROJECT: Studying vulnerability to drug addiction: contribution of the nicotinic acetylcholine receptor α5 subunit.',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/project/studying-vulnerability-drug-addiction-contribution-nicotinic-acetylcholine-receptor-%ce%b15-subunit/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 4523104445,
size: 0.5,
source: 4523,
target: 104445,
});
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 3801) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 1044453801,
size: 0.5,
source: 104445,
target: 3801 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4525) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 1044454525,
size: 0.5,
source: 104445,
target: 4525 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 102380,
label: '',
type: 'image',
url: '',
page_url: '',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 104445102380,
size: 0.5,
source: 104445,
target: 102380 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 92973,
label: 'Romain Icick',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2019/07/research_pasteur-roamin-150x150.png',
page_url: 'https://research.pasteur.fr/en/member/romain-icick/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 10444592973,
size: 0.5,
source: 104445,
target: 92973 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4523) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 1044454523,
size: 0.5,
source: 104445,
target: 4523 });
// adding node
var x_node = Math.cos(2 * 5 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 5 * Math.PI / N) * 10;
g.nodes.push({
id: 102118,
label: 'PROJECT: MECANICOC',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/project/mecanicoc/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 4523102118,
size: 0.5,
source: 4523,
target: 102118,
});
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 906,
label: 'Marie-Agnès Dillies',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2018/09/research_pasteur-photomadillies2-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/marie-agnes-dillies/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 102118906,
size: 0.5,
source: 102118,
target: 906 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 63328,
label: 'Anne Biton',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/?post_type=member&p=63328',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 10211863328,
size: 0.5,
source: 102118,
target: 63328 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4523) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 1021184523,
size: 0.5,
source: 102118,
target: 4523 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 3793,
label: 'Pierre-Jean Corringer',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2018/02/research_pasteur-photo_corringer-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/pierre-jean-corringer/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 1021183793,
size: 0.5,
source: 102118,
target: 3793 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4077,
label: '',
type: 'image',
url: '',
page_url: '',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 1021184077,
size: 0.5,
source: 102118,
target: 4077 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 3801) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 1021183801,
size: 0.5,
source: 102118,
target: 3801 });
// adding node
var x_node = Math.cos(2 * 6 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 6 * Math.PI / N) * 10;
g.nodes.push({
id: 89383,
label: 'EVENT: “Circuit mechanisms of associative fear learning in auditory cortex” – Pr Johannes J. Letzkus',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/event/circuit-mechanisms-of-associative-fear-learning-in-auditory-cortex-pr-johannes-j-letzkus/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 452389383,
size: 0.5,
source: 4523,
target: 89383,
});
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4523) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 893834523,
size: 0.5,
source: 89383,
target: 4523 });
// adding node
var x_node = Math.cos(2 * 7 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 7 * Math.PI / N) * 10;
g.nodes.push({
id: 41178,
label: 'PROGRAM_PROJECT: Major Federating Program Microbes & Brain',
x: x_node,
y: y_node,
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/09/research.pasteur.fr_grand-federative-program-microbes-brain-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/program_project/major-federating-program-microbes-brain/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 452341178,
size: 0.5,
source: 4523,
target: 41178,
});
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 58995,
label: 'Mallory Perrin-Wolff',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2017/05/research_pasteur-mallory-perrin-wolff-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/mallory-perrin-wolff/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
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y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 188798,
label: 'Francisco Palma Cerda',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2022/10/research_pasteur-francisco-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/francisco-palma-cerda/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 6201188798,
size: 0.5,
source: 6201,
target: 188798 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 148641,
label: 'Daniela Gaspar Santos',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2020/10/research_pasteur-enpaula-wildfrpaula-wild-daniela-150x150.png',
page_url: 'https://research.pasteur.fr/en/member/daniela-gaspar-santos/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 6201148641,
size: 0.5,
source: 6201,
target: 148641 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 188804) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 6201188804,
size: 0.5,
source: 6201,
target: 188804 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 190388,
label: 'Michiel van der Zwan',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2022/10/research_pasteur-michiel-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/michiel-van-der-zwan/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 6201190388,
size: 0.5,
source: 6201,
target: 190388 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 212274,
label: 'Alicia Velazquez de Castro Esteve',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2023/10/research_pasteur-enalicia-velazquez-de-castro-estevefralicia-velazquez-de-castro-esteve-alicia-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/alicia-velazquez-de-castro-esteve/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 6201212274,
size: 0.5,
source: 6201,
target: 212274 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 225088,
label: 'Carla Gouin',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2024/04/research_pasteur-encarla-gouinfrcarla-gouin-research-pasteur-encarla-gouinfrcarla-gouin-capture-decran-2024-10-12-a-18.37.22-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/carla-gouin/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 6201225088,
size: 0.5,
source: 6201,
target: 225088 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 227317,
label: 'José Fernando Garcia Rodrigo',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2024/06/research_pasteur-whatsapp-image-2022-04-17-at-10.41.54-am-150x150.jpeg',
page_url: 'https://research.pasteur.fr/en/member/jose-fernando-garcia-rodrigo/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 6201227317,
size: 0.5,
source: 6201,
target: 227317 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 237446,
label: 'Layal MASSARA',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2025/01/research_pasteur-enlayal-massarafrlayal-massara-research-pasteur-enlayal-massarafrlayal-massara-screenshot-2025-01-23-at-16.13.04-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/layal-massara/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 6201237446,
size: 0.5,
source: 6201,
target: 237446 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 237491) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 6201237491,
size: 0.5,
source: 6201,
target: 237491 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 251673,
label: 'Veranika PANASENKAVA',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2025/10/research_pasteur-veranika-panasenkava-1686225171225-150x150.jpeg',
page_url: 'https://research.pasteur.fr/en/member/veranika-panasenkava/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 6201251673,
size: 0.5,
source: 6201,
target: 251673 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 251676,
label: 'Iman CHARMARKE ASKAR',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/member/iman-charmarke-askar/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 6201251676,
size: 0.5,
source: 6201,
target: 251676 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 3801) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 62013801,
size: 0.5,
source: 6201,
target: 3801 });
var s = new sigma({
//container: document.getElementById('graph-main'),
graph: g,
renderer: {
// IMPORTANT:
// This works only with the canvas renderer, so the
// renderer type set as "canvas" is necessary here.
container: document.getElementById('graph-main'),
type: 'canvas'
},
settings: {
minNodeSize: 6,
maxNodeSize: 35,
mouseWheelEnabled: false,
font: 'Montserrat',
labelThreshold:25,
borderSize:1,
defaultNodeBorderColor: '#999',
sideMargin:25,
}
});
// We first need to save the original colors of our
// nodes and edges, like this:
s.graph.nodes().forEach(function(n) {
n.originalColor = n.color;
});
s.graph.edges().forEach(function(e) {
e.originalColor = e.color;
});
// When a node is clicked, we check for each node
// if it is a neighbor of the clicked one. If not,
// we set its color as grey, and else, it takes its
// original color.
// We do the same for the edges, and we only keep
// edges that have both extremities colored.
s.bind('clickNode', function(e) {
var nodeId = e.data.node.id,
toKeep = s.graph.neighbors(nodeId);
toKeep[nodeId] = e.data.node;
s.graph.nodes().forEach(function(n) {
if (toKeep[n.id])
n.color = '#35a9f5';
else
n.color = '#dddddd';
});
s.graph.edges().forEach(function(e) {
if (toKeep[e.source] && toKeep[e.target])
e.color = '#35a9f5';
else
e.color = '#dddddd';
});
// Since the data has been modified, we need to
// call the refresh method to make the colors
// update effective.
s.refresh();
});
// When the stage is clicked, we just color each
// node and edge with its original color.
s.bind('clickStage', function(e) {
s.graph.nodes().forEach(function(n) {
n.color = n.originalColor;
});
s.graph.edges().forEach(function(e) {
e.color = e.originalColor;
});
// Same as in the previous event:
s.refresh();
});
s.bind("doubleClickNode", function (e) {
$("#canvas-wrap, .sigma-scene, .sigma-mouse").val();
ajax_load_page( e.data.node.page_url );
});
var c = s.camera;
s.bind("rightClickStage", function (e) {
sigma.misc.animation.camera(c, {
ratio: c.ratio * c.settings('zoomingRatio')
}, {
duration: 200
});
});
// Configure the noverlap layout:
var noverlapListener = s.configNoverlap({
nodeMargin: 10,
scaleNodes: 0.3,
gridSize: 1,
easing: 'quadraticInOut', // animation transition function
duration: 4000 // animation duration. Long here for the purposes of this example only
});
// Bind the events:
noverlapListener.bind('start stop interpolate', function(e) {
//console.log(e.type);
if(e.type === 'start') {
//console.time('noverlap');
}
if(e.type === 'interpolate') {
//console.timeEnd('noverlap');
}
});
// Start the layout:
s.startNoverlap();
//s.refresh();
// Initialize the dragNodes plugin:
var dragListener = sigma.plugins.dragNodes(s, s.renderers[0]);
dragListener.bind('startdrag', function(event) {
});
dragListener.bind('drag', function(event) {
});
dragListener.bind('drop', function(event) {
});
dragListener.bind('dragend', function(event) {
});