GUIDE
- Left-click and drag the background to move the graph
- Left-click and drag the nodes to reorganize
- Left-click a node to view first level connections
- Double left-click a node to navigate to its page
- Double left-click the background to zoom in
- Right-click the background to zoom out
sigma.utils.pkg('sigma.canvas.nodes');
sigma.canvas.nodes.image = (function() {
var _cache = {},
_loading = {},
_callbacks = {};
// Return the renderer itself:
var renderer = function(node, context, settings) {
var args = arguments,
prefix = settings('prefix') || '',
size = node[prefix + 'size'],
color = node.color || settings('defaultNodeColor'),
url = node.url;
if (_cache[url]) {
context.save();
// Draw the clipping disc:
context.beginPath();
context.arc(
node[prefix + 'x'],
node[prefix + 'y'],
node[prefix + 'size'],
0,
Math.PI * 2,
true
);
context.closePath();
context.clip();
// Draw the image
context.drawImage(
_cache[url],
node[prefix + 'x'] - size,
node[prefix + 'y'] - size,
2 * size,
2 * size
);
// Quit the "clipping mode":
context.restore();
// Draw the border:
context.beginPath();
context.arc(
node[prefix + 'x'],
node[prefix + 'y'],
node[prefix + 'size'],
0,
Math.PI * 2,
true
);
context.lineWidth = 1;
context.strokeStyle = node.color || settings('defaultNodeColor');
context.stroke();
} else {
sigma.canvas.nodes.image.cache(url);
sigma.canvas.nodes.def.apply(
sigma.canvas.nodes,
args
);
}
};
// Let's add a public method to cache images, to make it possible to
// preload images before the initial rendering:
renderer.cache = function(url, callback) {
if (callback)
_callbacks[url] = callback;
if (_loading[url])
return;
var img = new Image();
img.onload = function() {
_loading[url] = false;
_cache[url] = img;
if (_callbacks[url]) {
_callbacks[url].call(this, img);
delete _callbacks[url];
}
};
_loading[url] = true;
img.src = url;
};
return renderer;
})();
var i,
s,
o,
offset_left = 0.5,
N = 1,
E = 40,
C = 5,
d = 0.5,
cs = [],
g = {
nodes: [],
edges: []
};
if (!sigma.classes.graph.hasMethod('neighbors')){
sigma.classes.graph.addMethod('neighbors', function(nodeId) {
var k,
neighbors = {},
index = this.allNeighborsIndex[nodeId] || {};
for (k in index)
neighbors[k] = this.nodesIndex[k];
return neighbors;
});
}
//adding the central node
g.nodes.push({
id: 4266,
label: 'Laura Schaeffer',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_schaeffer-150x150.jpg',
x: 0,
y: 0,
size: 30,
color: '#DDDDDD'
});
var biggest_node_size = 0;
N=10
// adding node
var x_node = Math.cos(2 * 0 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 0 * Math.PI / N) * 10;
g.nodes.push({
id: 247901,
label: 'COURSE: Cours Pasteur : Création et gestion de bases de données',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/course/cours-pasteur-creation-et-gestion-de-bases-de-donnees/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 4266247901,
size: 0.5,
source: 4266,
target: 247901,
});
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4266) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 2479014266,
size: 0.5,
source: 247901,
target: 4266 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 2624,
label: 'Arnaud Fontanet',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_arnaud-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/arnaud-fontanet/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 2479012624,
size: 0.5,
source: 247901,
target: 2624 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 7063,
label: 'Monica Sala',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/05/research_pasteur-monica-sala-research-pasteur-monica-sala-monicaphoto2020-3-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/monica-sala/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 2479017063,
size: 0.5,
source: 247901,
target: 7063 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 7199,
label: 'Hervé Waxin',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_herve-150x150.jpeg',
page_url: 'https://research.pasteur.fr/en/member/herve-waxin/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 2479017199,
size: 0.5,
source: 247901,
target: 7199 });
// adding node
var x_node = Math.cos(2 * 1 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 1 * Math.PI / N) * 10;
g.nodes.push({
id: 143621,
label: 'PROJECT: AFRIPOX – A One Health approach of monkeypox in Centrafrican Republic',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/project/afripox/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 4266143621,
size: 0.5,
source: 4266,
target: 143621,
});
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4328,
label: 'Antoine Gessain',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/09/research.pasteur.fr_a.g-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/antoine-gessain/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 1436214328,
size: 0.5,
source: 143621,
target: 4328 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4508,
label: 'Jean-Claude Manuguerra',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_fig43-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/jean-claude-manuguerra/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 1436214508,
size: 0.5,
source: 143621,
target: 4508 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4515,
label: 'Nicolas Berthet',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/member/nicolas-berthet/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 1436214515,
size: 0.5,
source: 143621,
target: 4515 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4510,
label: 'Jessica Vanhomwegen',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/05/research_pasteur-jessica-vanhomwegen-photo-j-vanhomwegen-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/jessica-vanhomwegen/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 1436214510,
size: 0.5,
source: 143621,
target: 4510 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4273,
label: 'Romulus Breban',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_breban-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/romulus-breban/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 1436214273,
size: 0.5,
source: 143621,
target: 4273 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4275,
label: 'Tamara Giles-Vernick',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/09/research.pasteur.fr_dsc6500-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/tamara-giles-vernick/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 1436214275,
size: 0.5,
source: 143621,
target: 4275 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 120408,
label: 'Romain Duda',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/?post_type=member&p=120408',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 143621120408,
size: 0.5,
source: 143621,
target: 120408 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 72419,
label: 'Emmanuel Nakouné',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/riip_member/emmanuel-nakoune/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 14362172419,
size: 0.5,
source: 143621,
target: 72419 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 7885,
label: 'Cassandre Von Platen',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2019/02/research_pasteur-photo_cassandre.jpg',
page_url: 'https://research.pasteur.fr/en/member/cassandre-von-platen/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 1436217885,
size: 0.5,
source: 143621,
target: 7885 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4501,
label: 'Christophe Batejat',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/?post_type=member&p=4501',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 1436214501,
size: 0.5,
source: 143621,
target: 4501 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4503,
label: 'Valérie Caro',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2020/07/research_pasteur-valerie_2020-3-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/valerie-caro/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 1436214503,
size: 0.5,
source: 143621,
target: 4503 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4266) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 1436214266,
size: 0.5,
source: 143621,
target: 4266 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 2624) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 1436212624,
size: 0.5,
source: 143621,
target: 2624 });
// adding node
var x_node = Math.cos(2 * 2 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 2 * Math.PI / N) * 10;
g.nodes.push({
id: 244772,
label: 'PROJECT: Vax-Action – MINT & SMART (Motivational Interviewing Training & Short Mapping And Reflexivity Tool): Development and evaluation of interventions to promote vaccine acceptance among healthcare professionals',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/project/vax-action-mint-smart-motivational-interviewing-training-short-mapping-and-reflexivity-tooldevelopment-and-evaluation-of-interventions-to-promote-vaccine-acceptance-among-healthcare-p/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 4266244772,
size: 0.5,
source: 4266,
target: 244772,
});
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 176461,
label: 'Gaëlle Lievre',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/member/gaelle-lievre/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 244772176461,
size: 0.5,
source: 244772,
target: 176461 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4266) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 2447724266,
size: 0.5,
source: 244772,
target: 4266 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4267,
label: 'Laura Tondeur',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/09/research.pasteur.fr_research.pasteur.fr_tondeur-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/laura-tondeur/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 2447724267,
size: 0.5,
source: 244772,
target: 4267 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 8543,
label: 'Judith Mueller',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_mueller-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/judith-mueller/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 2447728543,
size: 0.5,
source: 244772,
target: 8543 });
// adding node
var x_node = Math.cos(2 * 3 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 3 * Math.PI / N) * 10;
g.nodes.push({
id: 244636,
label: 'PROJECT: MAGFA – Point of care magnetic immunoassay for sub-Saharan Africa: Application to triple elimination of mother-to-child transmission of HIV, viral hepatitis, and syphilis',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/project/magfa-point-of-care-magnetic-immunoassay-for-sub-saharan-africa-application-to-triple-elimination-of-mother-to-child-transmission-of-hiv-viral-hepatitis-and-syphilis/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 4266244636,
size: 0.5,
source: 4266,
target: 244636,
});
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 239701,
label: 'Rewhandamzi Boms',
type: 'image',
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//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 232303) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 232762232303,
size: 0.5,
source: 232762,
target: 232303 });
// adding node
var x_node = Math.cos(2 * 7 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 7 * Math.PI / N) * 10;
g.nodes.push({
id: 157824,
label: 'PROJECT: ComCor: Study of sociodemographic factors, behaviors and practices associated with SARS-CoV-2 infection',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/project/comcor-study-of-sociodemographic-factors-behaviors-and-practices-associated-with-sars-cov-2-infection/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 4266157824,
size: 0.5,
source: 4266,
target: 157824,
});
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4266) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 1578244266,
size: 0.5,
source: 157824,
target: 4266 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 67917,
label: 'Rebecca Grant',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2016/07/research.pasteur.fr_21dfcdd-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/rebecca-grant/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 15782467917,
size: 0.5,
source: 157824,
target: 67917 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 78192,
label: 'Olivia Chény',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2017/01/research.pasteur.fr_dsc0616mod2-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/olivia-cheny/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 15782478192,
size: 0.5,
source: 157824,
target: 78192 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 7885) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 1578247885,
size: 0.5,
source: 157824,
target: 7885 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 176455,
label: 'Simon Galmiche',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/?post_type=member&p=176455',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 157824176455,
size: 0.5,
source: 157824,
target: 176455 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 2624) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 1578242624,
size: 0.5,
source: 157824,
target: 2624 });
// adding node
var x_node = Math.cos(2 * 8 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 8 * Math.PI / N) * 10;
g.nodes.push({
id: 35021,
label: 'PROJECT: ANRS 12332 HepNile: Evaluation of “Real Life” Efficacy and Safety of antiviral treatments including new Direct Antiviral Agents among patients treated for Chronic Hepatitis C at Egyptian National Treatment Centres',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/project/anrs-12332-hepnile-evaluation-of-real-life-efficacy-and-safety-of-antiviral-treatments-including-new-direct-antiviral-agents-among-patients-treated-for-chronic-hepatitis-c-at-egyptian-national-tr/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 426635021,
size: 0.5,
source: 4266,
target: 35021,
});
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4277) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 350214277,
size: 0.5,
source: 35021,
target: 4277 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4266) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 350214266,
size: 0.5,
source: 35021,
target: 4266 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 63491,
label: 'Larissa Vernier',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2016/03/research.pasteur.fr_dsc1831-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/larissa-vernier/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 3502163491,
size: 0.5,
source: 35021,
target: 63491 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 2624) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 350212624,
size: 0.5,
source: 35021,
target: 2624 });
// adding node
var x_node = Math.cos(2 * 9 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 9 * Math.PI / N) * 10;
g.nodes.push({
id: 6229,
label: 'TEAM: Epidemiology of Emerging Diseases',
x: x_node,
y: y_node,
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_electron-micrograph-of-ebola-virus-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/team/epidemiology-of-emerging-diseases/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 42666229,
size: 0.5,
source: 4266,
target: 6229,
});
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 239701) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 6229239701,
size: 0.5,
source: 6229,
target: 239701 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4273) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 62294273,
size: 0.5,
source: 6229,
target: 4273 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 239683,
label: 'Michael Casera',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/member/michael-casera/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 6229239683,
size: 0.5,
source: 6229,
target: 239683 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 233386) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 6229233386,
size: 0.5,
source: 6229,
target: 233386 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 234627,
label: 'Alexandra FAMIGLIETTI',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2024/11/research_pasteur-enalexandra-famigliettifralexandra-famiglietti-img-4373-150x150.jpeg',
page_url: 'https://research.pasteur.fr/en/member/alexandra-famiglietti/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 6229234627,
size: 0.5,
source: 6229,
target: 234627 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 234637) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 6229234637,
size: 0.5,
source: 6229,
target: 234637 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 238805,
label: 'Sayfonh Khamphasith',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2025/02/research_pasteur-ensayfonh-khamphasithfrsayfonh-khamphasith-research-pasteur-ensayfonh-khamphasithfrsayfonh-khamphasith-photo-sk-nb-l-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/sayfonh-khamphasith/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 6229238805,
size: 0.5,
source: 6229,
target: 238805 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 176461) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 6229176461,
size: 0.5,
source: 6229,
target: 176461 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4263) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 62294263,
size: 0.5,
source: 6229,
target: 4263 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 246955,
label: 'Camila Montesinos Guevara',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/member/camila-montesinos-guevara/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 6229246955,
size: 0.5,
source: 6229,
target: 246955 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 8543) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 62298543,
size: 0.5,
source: 6229,
target: 8543 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 239698,
label: 'Amanda Munoz',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2025/02/research_pasteur-enamanda-munozframanda-munoz-photo-amz-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/amanda-munoz/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 6229239698,
size: 0.5,
source: 6229,
target: 239698 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 234642,
label: 'Juan Carlos Ocampo',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2024/11/research_pasteur-enjuan-carlos-ocampofrjuan-carlos-ocampo-foto-perfil-fondo-gris-cara-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/juan-carlos-ocampo/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 6229234642,
size: 0.5,
source: 6229,
target: 234642 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 145046,
label: 'Laurie Pinaud',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2020/11/research_pasteur-1398451-10151989867577520-1823773709-o-e1604852006341-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/laurie-pinaud-2/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 6229145046,
size: 0.5,
source: 6229,
target: 145046 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4265,
label: 'Claire Rekacewicz',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/member/claire-rekacewicz/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 62294265,
size: 0.5,
source: 6229,
target: 4265 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4266) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 62294266,
size: 0.5,
source: 6229,
target: 4266 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4277) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 62294277,
size: 0.5,
source: 6229,
target: 4277 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4267) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 62294267,
size: 0.5,
source: 6229,
target: 4267 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4272) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 62294272,
size: 0.5,
source: 6229,
target: 4272 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 2624) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 62292624,
size: 0.5,
source: 6229,
target: 2624 });
var s = new sigma({
//container: document.getElementById('graph-main'),
graph: g,
renderer: {
// IMPORTANT:
// This works only with the canvas renderer, so the
// renderer type set as "canvas" is necessary here.
container: document.getElementById('graph-main'),
type: 'canvas'
},
settings: {
minNodeSize: 6,
maxNodeSize: 35,
mouseWheelEnabled: false,
font: 'Montserrat',
labelThreshold:25,
borderSize:1,
defaultNodeBorderColor: '#999',
sideMargin:25,
}
});
// We first need to save the original colors of our
// nodes and edges, like this:
s.graph.nodes().forEach(function(n) {
n.originalColor = n.color;
});
s.graph.edges().forEach(function(e) {
e.originalColor = e.color;
});
// When a node is clicked, we check for each node
// if it is a neighbor of the clicked one. If not,
// we set its color as grey, and else, it takes its
// original color.
// We do the same for the edges, and we only keep
// edges that have both extremities colored.
s.bind('clickNode', function(e) {
var nodeId = e.data.node.id,
toKeep = s.graph.neighbors(nodeId);
toKeep[nodeId] = e.data.node;
s.graph.nodes().forEach(function(n) {
if (toKeep[n.id])
n.color = '#35a9f5';
else
n.color = '#dddddd';
});
s.graph.edges().forEach(function(e) {
if (toKeep[e.source] && toKeep[e.target])
e.color = '#35a9f5';
else
e.color = '#dddddd';
});
// Since the data has been modified, we need to
// call the refresh method to make the colors
// update effective.
s.refresh();
});
// When the stage is clicked, we just color each
// node and edge with its original color.
s.bind('clickStage', function(e) {
s.graph.nodes().forEach(function(n) {
n.color = n.originalColor;
});
s.graph.edges().forEach(function(e) {
e.color = e.originalColor;
});
// Same as in the previous event:
s.refresh();
});
s.bind("doubleClickNode", function (e) {
$("#canvas-wrap, .sigma-scene, .sigma-mouse").val();
ajax_load_page( e.data.node.page_url );
});
var c = s.camera;
s.bind("rightClickStage", function (e) {
sigma.misc.animation.camera(c, {
ratio: c.ratio * c.settings('zoomingRatio')
}, {
duration: 200
});
});
// Configure the noverlap layout:
var noverlapListener = s.configNoverlap({
nodeMargin: 10,
scaleNodes: 0.3,
gridSize: 1,
easing: 'quadraticInOut', // animation transition function
duration: 4000 // animation duration. Long here for the purposes of this example only
});
// Bind the events:
noverlapListener.bind('start stop interpolate', function(e) {
//console.log(e.type);
if(e.type === 'start') {
//console.time('noverlap');
}
if(e.type === 'interpolate') {
//console.timeEnd('noverlap');
}
});
// Start the layout:
s.startNoverlap();
//s.refresh();
// Initialize the dragNodes plugin:
var dragListener = sigma.plugins.dragNodes(s, s.renderers[0]);
dragListener.bind('startdrag', function(event) {
});
dragListener.bind('drag', function(event) {
});
dragListener.bind('drop', function(event) {
});
dragListener.bind('dragend', function(event) {
});