GUIDE
- Left-click and drag the background to move the graph
- Left-click and drag the nodes to reorganize
- Left-click a node to view first level connections
- Double left-click a node to navigate to its page
- Double left-click the background to zoom in
- Right-click the background to zoom out
sigma.utils.pkg('sigma.canvas.nodes');
sigma.canvas.nodes.image = (function() {
var _cache = {},
_loading = {},
_callbacks = {};
// Return the renderer itself:
var renderer = function(node, context, settings) {
var args = arguments,
prefix = settings('prefix') || '',
size = node[prefix + 'size'],
color = node.color || settings('defaultNodeColor'),
url = node.url;
if (_cache[url]) {
context.save();
// Draw the clipping disc:
context.beginPath();
context.arc(
node[prefix + 'x'],
node[prefix + 'y'],
node[prefix + 'size'],
0,
Math.PI * 2,
true
);
context.closePath();
context.clip();
// Draw the image
context.drawImage(
_cache[url],
node[prefix + 'x'] - size,
node[prefix + 'y'] - size,
2 * size,
2 * size
);
// Quit the "clipping mode":
context.restore();
// Draw the border:
context.beginPath();
context.arc(
node[prefix + 'x'],
node[prefix + 'y'],
node[prefix + 'size'],
0,
Math.PI * 2,
true
);
context.lineWidth = 1;
context.strokeStyle = node.color || settings('defaultNodeColor');
context.stroke();
} else {
sigma.canvas.nodes.image.cache(url);
sigma.canvas.nodes.def.apply(
sigma.canvas.nodes,
args
);
}
};
// Let's add a public method to cache images, to make it possible to
// preload images before the initial rendering:
renderer.cache = function(url, callback) {
if (callback)
_callbacks[url] = callback;
if (_loading[url])
return;
var img = new Image();
img.onload = function() {
_loading[url] = false;
_cache[url] = img;
if (_callbacks[url]) {
_callbacks[url].call(this, img);
delete _callbacks[url];
}
};
_loading[url] = true;
img.src = url;
};
return renderer;
})();
var i,
s,
o,
offset_left = 0.5,
N = 1,
E = 40,
C = 5,
d = 0.5,
cs = [],
g = {
nodes: [],
edges: []
};
if (!sigma.classes.graph.hasMethod('neighbors')){
sigma.classes.graph.addMethod('neighbors', function(nodeId) {
var k,
neighbors = {},
index = this.allNeighborsIndex[nodeId] || {};
for (k in index)
neighbors[k] = this.nodesIndex[k];
return neighbors;
});
}
//adding the central node
g.nodes.push({
id: 4207,
label: 'Alexandre Alanio',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2018/03/research_pasteur-alanio_2018_88830011-copie-1-150x150.jpeg',
x: 0,
y: 0,
size: 30,
color: '#DDDDDD'
});
var biggest_node_size = 0;
N=13
// adding node
var x_node = Math.cos(2 * 0 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 0 * Math.PI / N) * 10;
g.nodes.push({
id: 120206,
label: 'PROJECT: Improve molecular methods to detect Histoplasma capsulatum in humans',
x: x_node,
y: y_node,
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2019/01/research_pasteur-25082009-histoplasma-capsulatum-giemsa-palais-01-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/project/improve-molecular-methods-to-detect-histoplasma-capsulatum-in-humans/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 4207120206,
size: 0.5,
source: 4207,
target: 120206,
});
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 8554,
label: 'Aude Sturny-Leclere',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_asl-150x150.png',
page_url: 'https://research.pasteur.fr/en/member/aude-sturny-leclere/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 1202068554,
size: 0.5,
source: 120206,
target: 8554 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 105883,
label: 'Maud Gits-Muselli',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2018/08/research_pasteur-maud3-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/fr-maud-gits-muselli/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 120206105883,
size: 0.5,
source: 120206,
target: 105883 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 8551,
label: 'Stéphane Bretagne',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_sb-150x150.png',
page_url: 'https://research.pasteur.fr/en/member/stephane-bretagne/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 1202068551,
size: 0.5,
source: 120206,
target: 8551 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4203,
label: 'Olivier Lortholary',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_sans-titre-150x150.png',
page_url: 'https://research.pasteur.fr/en/member/olivier-lortholary/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 1202064203,
size: 0.5,
source: 120206,
target: 4203 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4209,
label: 'Dea Garcia-Hermoso',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_dgh-150x150.png',
page_url: 'https://research.pasteur.fr/en/member/dea-garcia-hermoso/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 1202064209,
size: 0.5,
source: 120206,
target: 4209 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4204,
label: 'Françoise Dromer',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2019/04/research_pasteur-phototetefd_042019-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/francoise-dromer/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 1202064204,
size: 0.5,
source: 120206,
target: 4204 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4207) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 1202064207,
size: 0.5,
source: 120206,
target: 4207 });
// adding node
var x_node = Math.cos(2 * 1 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 1 * Math.PI / N) * 10;
g.nodes.push({
id: 120199,
label: 'PROJECT: Understanding the genesis of the Titan cells in Cryptococcus neoformans',
x: x_node,
y: y_node,
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2019/01/research_pasteur-striking-image-3-improved-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/project/understanding-the-genesis-of-the-titan-cells-in-cryptococcus-neoformans/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 4207120199,
size: 0.5,
source: 4207,
target: 120199,
});
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 8554) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 1201998554,
size: 0.5,
source: 120199,
target: 8554 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4207) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 1201994207,
size: 0.5,
source: 120199,
target: 4207 });
// adding node
var x_node = Math.cos(2 * 2 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 2 * Math.PI / N) * 10;
g.nodes.push({
id: 119716,
label: 'PROJECT: Molecular variability of Pneumocystis jirovecii: from genotype to antigenic variability',
x: x_node,
y: y_node,
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2019/01/research_pasteur-pj-150x150.png',
page_url: 'https://research.pasteur.fr/en/project/molecular-variability-of-pneumocystis-jirovecii-from-genotype-to-antigenic-variability/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 4207119716,
size: 0.5,
source: 4207,
target: 119716,
});
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 105883) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 119716105883,
size: 0.5,
source: 119716,
target: 105883 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 8551) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 1197168551,
size: 0.5,
source: 119716,
target: 8551 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4207) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 1197164207,
size: 0.5,
source: 119716,
target: 4207 });
// adding node
var x_node = Math.cos(2 * 3 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 3 * Math.PI / N) * 10;
g.nodes.push({
id: 120203,
label: 'PROJECT: CryptoVIEW: Unraveling pathogenesis of Cryptococcosis using optical and multimodal visualizaion of enigmatic events and virulence aspects in vivo.',
x: x_node,
y: y_node,
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2019/01/research_pasteur-in-vivo-imaging-of-cn-strain-differences-glissees-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/project/cryptoview-unraveling-pathogenesis-of-cryptococcosis-using-optical-and-multimodal-visualizaion-of-enigmatic-events-and-virulence-aspects-in-vivo/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 4207120203,
size: 0.5,
source: 4207,
target: 120203,
});
// adding node
var x_node = Math.cos(2 * 4 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 4 * Math.PI / N) * 10;
g.nodes.push({
id: 110093,
label: 'COURSE: Medical Mycology Course in Africa',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/course/medical-mycology-course-in-africa/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 4207110093,
size: 0.5,
source: 4207,
target: 110093,
});
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4203) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 1100934203,
size: 0.5,
source: 110093,
target: 4203 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4209) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 1100934209,
size: 0.5,
source: 110093,
target: 4209 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 8554) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 1100938554,
size: 0.5,
source: 110093,
target: 8554 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4207) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 1100934207,
size: 0.5,
source: 110093,
target: 4207 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 92274,
label: 'Timothée Boyer Chammard',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2017/07/research_pasteur-img_20170227_183128-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/fr-timothee-boyer-chammard/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 11009392274,
size: 0.5,
source: 110093,
target: 92274 });
// adding node
var x_node = Math.cos(2 * 5 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 5 * Math.PI / N) * 10;
g.nodes.push({
id: 92960,
label: 'PROJECT: AMBITION-cm',
x: x_node,
y: y_node,
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2018/07/research_pasteur-ambition-logo-150x150.png',
page_url: 'https://research.pasteur.fr/en/project/ambition-cm/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 420792960,
size: 0.5,
source: 4207,
target: 92960,
});
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4203) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 929604203,
size: 0.5,
source: 92960,
target: 4203 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4207) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 929604207,
size: 0.5,
source: 92960,
target: 4207 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 92274) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 9296092274,
size: 0.5,
source: 92960,
target: 92274 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 111765,
label: 'Tshepiso MBANGIWA',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2018/08/research_pasteur-thsepiso2-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/tshepiso-mbangiwa/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 92960111765,
size: 0.5,
source: 92960,
target: 111765 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 8554) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 929608554,
size: 0.5,
source: 92960,
target: 8554 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4204) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 929604204,
size: 0.5,
source: 92960,
target: 4204 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 88350,
label: 'Joseph Jarvis',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2017/07/research_pasteur-jarvis_joseph01-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/epartner/joseph-jarvis/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 9296088350,
size: 0.5,
source: 92960,
target: 88350 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 93289,
label: 'Tom Harrison',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2017/07/research_pasteur-tomharrison-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/epartner/fr-tom-harrison/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 9296093289,
size: 0.5,
source: 92960,
target: 93289 });
// adding node
var x_node = Math.cos(2 * 6 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 6 * Math.PI / N) * 10;
g.nodes.push({
id: 28610,
label: 'PROJECT: Deciphering dormancy in Cryptocococcus neoformans',
x: x_node,
y: y_node,
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_cryptococcus-neoformans-stationary-phase-met-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/project/deciphering-dormancy-cryptocococcus-neoformans/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 420728610,
size: 0.5,
source: 4207,
target: 28610,
});
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 8554) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 286108554,
size: 0.5,
source: 28610,
target: 8554 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 8558,
label: 'Benjamin Hommel',
type: 'image',
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y_site = y_node + ((Math.random() * 2)-1) + offset_left;
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// adding site
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label: 'Nicolas Dufour',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_nic-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/nicolas-dufour/',
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//check if content already exist
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// adding site
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//check if content already exist
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// adding site
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label: 'Clemence Hollande',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/09/research.pasteur.fr_photo18-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/clemence-hollande/',
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//check if content already exist
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// adding site
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label: 'Bich-Tram Huynh',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_bth-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/bich-tram-huynh/',
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// adding site
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label: 'Anita Beggiato',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/09/research.pasteur.fr_beggiato-150x150.png',
page_url: 'https://research.pasteur.fr/en/epartner/anita-beggiato/',
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// adding site
g.nodes.push({
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label: 'Richard Delorme',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/08/research.pasteur.fr_delorme-150x150.png',
page_url: 'https://research.pasteur.fr/en/member/richard-delorme/',
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y: y_site,
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color: '#dddddd'
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//link to content
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//check if content already exist
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// adding site
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label: 'Frédérique Amsellem',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/09/research.pasteur.fr_frederique_amsellem-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/epartner/frederique-amsellem/',
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// adding site
g.nodes.push({
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label: 'Aurélien Mazeraud',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/10/research.pasteur.fr_20151001_141625-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/aurelien-mazeraud/',
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//check if content already exist
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// adding site
g.nodes.push({
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label: 'Anna Maruani',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/09/research.pasteur.fr_maruani-150x150.png',
page_url: 'https://research.pasteur.fr/en/epartner/anna-maruani/',
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color: '#dddddd'
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//link to content
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//check if content already exist
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// adding site
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label: 'Blandine Rammaert',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_br-150x150.png',
page_url: 'https://research.pasteur.fr/en/member/blandine-rammaert/',
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color: '#dddddd'
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//check if content already exist
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// adding site
g.nodes.push({
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label: 'Laurence Weiss',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_laurence_0-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/laurence-weiss/',
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//link to content
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//check if content already exist
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// adding site
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page_url: '',
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//check if content already exist
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// adding site
g.nodes.push({
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label: 'Catherine Pierre-Audigier',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_pierre-150x150.jpeg',
page_url: 'https://research.pasteur.fr/en/member/catherine-pierre-audigier/',
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y: y_site,
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color: '#dddddd'
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//link to content
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//check if content already exist
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// adding site
g.nodes.push({
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label: 'Claire Poyart',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_ha30-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/claire-poyart/',
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color: '#dddddd'
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//link to content
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//check if content already exist
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// adding site
g.nodes.push({
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label: 'Marie-Elisabeth Bougnoux',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_eli-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/elisabeth-bougnoux-andremont/',
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y: y_site,
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color: '#dddddd'
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//link to content
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//check if content already exist
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//link to content
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//check if content already exist
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//link to content
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//check if content already exist
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y_site = y_node + ((Math.random() * 2)-1) + offset_left;
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// adding site
g.nodes.push({
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label: 'Jean Menotti',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_menotti-150x150.png',
page_url: 'https://research.pasteur.fr/en/member/jean-menotti/',
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color: '#dddddd'
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//check if content already exist
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// adding site
g.nodes.push({
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label: 'Tarek Sharshar',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/11/research.pasteur.fr_img_20151120_154248-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/tarek-sharshar/',
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color: '#dddddd'
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//check if content already exist
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y_site = y_node + ((Math.random() * 2)-1) + offset_left;
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// adding site
g.nodes.push({
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label: 'Anne Claude Tabet',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/08/research.pasteur.fr_tabetac-150x150.png',
page_url: 'https://research.pasteur.fr/en/member/anne-claude-tabet/',
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//check if content already exist
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// adding site
g.nodes.push({
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label: 'Adrien Bouglé',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/11/research.pasteur.fr_lisbonne-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/adrien-bougle/',
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y: y_site,
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color: '#dddddd'
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//check if content already exist
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// adding site
g.nodes.push({
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label: 'Camille d’Humières',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2016/01/research.pasteur.fr_photo_sm-150x150.png',
page_url: 'https://research.pasteur.fr/en/member/camille-dhumieres/',
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y: y_site,
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color: '#dddddd'
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//check if content already exist
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// adding site
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label: 'Perrine Parize',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2017/09/research_pasteur-perrine-p1-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/perrine-parize/',
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color: '#dddddd'
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//check if content already exist
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// adding site
g.nodes.push({
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label: 'Asmaa Tazi',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_asma-150x150.jpeg',
page_url: 'https://research.pasteur.fr/en/member/asmaa-tazi/',
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//check if content already exist
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y_site = y_node + ((Math.random() * 2)-1) - offset_left;
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// adding site
g.nodes.push({
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label: 'Odile Gelpi',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2016/04/research.pasteur.fr_og-pasteur-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/odile-gelpi/',
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y: y_site,
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color: '#dddddd'
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//check if content already exist
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// adding site
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label: 'Clementine Schilte',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/08/research.pasteur.fr_photo-clem-150x150.png',
page_url: 'https://research.pasteur.fr/en/member/clementine-schilte/',
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g.nodes.forEach(function(n) {
if (n.id == 55986) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 619855986,
size: 0.5,
source: 6198,
target: 55986 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4203) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 61984203,
size: 0.5,
source: 6198,
target: 4203 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 8554) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 61988554,
size: 0.5,
source: 6198,
target: 8554 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 105883) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 6198105883,
size: 0.5,
source: 6198,
target: 105883 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 111765) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 6198111765,
size: 0.5,
source: 6198,
target: 111765 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4039,
label: 'Sarah Wong',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2018/07/research_pasteur-sarah1-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/sze-wah-sarah-wong/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 61984039,
size: 0.5,
source: 6198,
target: 4039 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 144154) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 6198144154,
size: 0.5,
source: 6198,
target: 144154 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 144165) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 6198144165,
size: 0.5,
source: 6198,
target: 144165 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 144169,
label: 'Raffael Araujo de Castro',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/member/raffael-araujo-de-castro/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 6198144169,
size: 0.5,
source: 6198,
target: 144169 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 144391,
label: 'Sarah Dellière',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2020/07/research_pasteur-id-eccmid-2019-copie-2-150x150.jpeg',
page_url: 'https://research.pasteur.fr/en/member/sarah-delliere/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 6198144391,
size: 0.5,
source: 6198,
target: 144391 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4204) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 61984204,
size: 0.5,
source: 6198,
target: 4204 });
var s = new sigma({
//container: document.getElementById('graph-main'),
graph: g,
renderer: {
// IMPORTANT:
// This works only with the canvas renderer, so the
// renderer type set as "canvas" is necessary here.
container: document.getElementById('graph-main'),
type: 'canvas'
},
settings: {
minNodeSize: 6,
maxNodeSize: 35,
mouseWheelEnabled: false,
font: 'Montserrat',
labelThreshold:25,
borderSize:1,
defaultNodeBorderColor: '#999',
sideMargin:25,
}
});
// We first need to save the original colors of our
// nodes and edges, like this:
s.graph.nodes().forEach(function(n) {
n.originalColor = n.color;
});
s.graph.edges().forEach(function(e) {
e.originalColor = e.color;
});
// When a node is clicked, we check for each node
// if it is a neighbor of the clicked one. If not,
// we set its color as grey, and else, it takes its
// original color.
// We do the same for the edges, and we only keep
// edges that have both extremities colored.
s.bind('clickNode', function(e) {
var nodeId = e.data.node.id,
toKeep = s.graph.neighbors(nodeId);
toKeep[nodeId] = e.data.node;
s.graph.nodes().forEach(function(n) {
if (toKeep[n.id])
n.color = '#35a9f5';
else
n.color = '#dddddd';
});
s.graph.edges().forEach(function(e) {
if (toKeep[e.source] && toKeep[e.target])
e.color = '#35a9f5';
else
e.color = '#dddddd';
});
// Since the data has been modified, we need to
// call the refresh method to make the colors
// update effective.
s.refresh();
});
// When the stage is clicked, we just color each
// node and edge with its original color.
s.bind('clickStage', function(e) {
s.graph.nodes().forEach(function(n) {
n.color = n.originalColor;
});
s.graph.edges().forEach(function(e) {
e.color = e.originalColor;
});
// Same as in the previous event:
s.refresh();
});
s.bind("doubleClickNode", function (e) {
$("#canvas-wrap, .sigma-scene, .sigma-mouse").val();
ajax_load_page( e.data.node.page_url );
});
var c = s.camera;
s.bind("rightClickStage", function (e) {
sigma.misc.animation.camera(c, {
ratio: c.ratio * c.settings('zoomingRatio')
}, {
duration: 200
});
});
// Configure the noverlap layout:
var noverlapListener = s.configNoverlap({
nodeMargin: 10,
scaleNodes: 0.3,
gridSize: 1,
easing: 'quadraticInOut', // animation transition function
duration: 4000 // animation duration. Long here for the purposes of this example only
});
// Bind the events:
noverlapListener.bind('start stop interpolate', function(e) {
//console.log(e.type);
if(e.type === 'start') {
//console.time('noverlap');
}
if(e.type === 'interpolate') {
//console.timeEnd('noverlap');
}
});
// Start the layout:
s.startNoverlap();
//s.refresh();
// Initialize the dragNodes plugin:
var dragListener = sigma.plugins.dragNodes(s, s.renderers[0]);
dragListener.bind('startdrag', function(event) {
});
dragListener.bind('drag', function(event) {
});
dragListener.bind('drop', function(event) {
});
dragListener.bind('dragend', function(event) {
});