GUIDE
- Left-click and drag the background to move the graph
- Left-click and drag the nodes to reorganize
- Left-click a node to view first level connections
- Double left-click a node to navigate to its page
- Double left-click the background to zoom in
- Right-click the background to zoom out
sigma.utils.pkg('sigma.canvas.nodes');
sigma.canvas.nodes.image = (function() {
var _cache = {},
_loading = {},
_callbacks = {};
// Return the renderer itself:
var renderer = function(node, context, settings) {
var args = arguments,
prefix = settings('prefix') || '',
size = node[prefix + 'size'],
color = node.color || settings('defaultNodeColor'),
url = node.url;
if (_cache[url]) {
context.save();
// Draw the clipping disc:
context.beginPath();
context.arc(
node[prefix + 'x'],
node[prefix + 'y'],
node[prefix + 'size'],
0,
Math.PI * 2,
true
);
context.closePath();
context.clip();
// Draw the image
context.drawImage(
_cache[url],
node[prefix + 'x'] - size,
node[prefix + 'y'] - size,
2 * size,
2 * size
);
// Quit the "clipping mode":
context.restore();
// Draw the border:
context.beginPath();
context.arc(
node[prefix + 'x'],
node[prefix + 'y'],
node[prefix + 'size'],
0,
Math.PI * 2,
true
);
context.lineWidth = 1;
context.strokeStyle = node.color || settings('defaultNodeColor');
context.stroke();
} else {
sigma.canvas.nodes.image.cache(url);
sigma.canvas.nodes.def.apply(
sigma.canvas.nodes,
args
);
}
};
// Let's add a public method to cache images, to make it possible to
// preload images before the initial rendering:
renderer.cache = function(url, callback) {
if (callback)
_callbacks[url] = callback;
if (_loading[url])
return;
var img = new Image();
img.onload = function() {
_loading[url] = false;
_cache[url] = img;
if (_callbacks[url]) {
_callbacks[url].call(this, img);
delete _callbacks[url];
}
};
_loading[url] = true;
img.src = url;
};
return renderer;
})();
var i,
s,
o,
offset_left = 0.5,
N = 1,
E = 40,
C = 5,
d = 0.5,
cs = [],
g = {
nodes: [],
edges: []
};
if (!sigma.classes.graph.hasMethod('neighbors')){
sigma.classes.graph.addMethod('neighbors', function(nodeId) {
var k,
neighbors = {},
index = this.allNeighborsIndex[nodeId] || {};
for (k in index)
neighbors[k] = this.nodesIndex[k];
return neighbors;
});
}
//adding the central node
g.nodes.push({
id: 26203,
label: 'Clinical Investigation and Access to BioResources (ICAReB)',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/09/research.pasteur.fr_institutpasteur_36209-150x150.jpg',
x: 0,
y: 0,
size: 30,
color: '#DDDDDD'
});
N=15
var x_node = Math.cos(2 * 0 * Math.PI / N) * 2;
var y_node = Math.sin(2 * 0 * Math.PI / N) * 2;
var biggest_node_size = 0;
//check if content already exist
x_site = Math.cos(2 * 0 * Math.PI / N) * 2;
y_site = Math.sin(2 * 0 * Math.PI / N) * 2;
// adding site
g.nodes.push({
id: 7870,
label: 'Amina Ait Saadi',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/11/research.pasteur.fr_dsc84433-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/amina-ait-saadi/',
x: x_site,
y: y_site,
size: 16,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 262037870,
size: 0.5,
source: 26203,
target: 7870 });
//check if content already exist
x_site = Math.cos(2 * 1 * Math.PI / N) * 2;
y_site = Math.sin(2 * 1 * Math.PI / N) * 2;
// adding site
g.nodes.push({
id: 4958,
label: 'Laurence Arowas',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2018/01/research_pasteur-la-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/laurence-arowas/',
x: x_site,
y: y_site,
size: 16,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 262034958,
size: 0.5,
source: 26203,
target: 4958 });
//check if content already exist
x_site = Math.cos(2 * 2 * Math.PI / N) * 2;
y_site = Math.sin(2 * 2 * Math.PI / N) * 2;
// adding site
g.nodes.push({
id: 74238,
label: 'Remy Artus',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2017/04/research.pasteur.fr_artus-r®my-1-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/remy-artus/',
x: x_site,
y: y_site,
size: 16,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 2620374238,
size: 0.5,
source: 26203,
target: 74238 });
//check if content already exist
x_site = Math.cos(2 * 3 * Math.PI / N) * 2;
y_site = Math.sin(2 * 3 * Math.PI / N) * 2;
// adding site
g.nodes.push({
id: 2998,
label: 'Sophie Chaouche',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/03/DSC9338-e1433491257143-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/sophie-chaouche/',
x: x_site,
y: y_site,
size: 16,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 262032998,
size: 0.5,
source: 26203,
target: 2998 });
//check if content already exist
x_site = Math.cos(2 * 4 * Math.PI / N) * 2;
y_site = Math.sin(2 * 4 * Math.PI / N) * 2;
// adding site
g.nodes.push({
id: 154414,
label: 'Dorian Cheval',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/member/dorian-cheval/',
x: x_site,
y: y_site,
size: 16,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 26203154414,
size: 0.5,
source: 26203,
target: 154414 });
//check if content already exist
x_site = Math.cos(2 * 5 * Math.PI / N) * 2;
y_site = Math.sin(2 * 5 * Math.PI / N) * 2;
// adding site
g.nodes.push({
id: 131385,
label: 'Myriem Chikhaoui',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2019/09/research_pasteur-myriem-chikhaoui-njkzoti4-copier-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/myriem-chikhaoui/',
x: x_site,
y: y_site,
size: 16,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 26203131385,
size: 0.5,
source: 26203,
target: 131385 });
//check if content already exist
x_site = Math.cos(2 * 6 * Math.PI / N) * 2;
y_site = Math.sin(2 * 6 * Math.PI / N) * 2;
// adding site
g.nodes.push({
id: 7874,
label: 'Nicole Corre-Catelin',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/11/research.pasteur.fr_17-6kg-de-moins.jpg',
page_url: 'https://research.pasteur.fr/en/member/nicole-corre-catelin/',
x: x_site,
y: y_site,
size: 16,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 262037874,
size: 0.5,
source: 26203,
target: 7874 });
//check if content already exist
x_site = Math.cos(2 * 7 * Math.PI / N) * 2;
y_site = Math.sin(2 * 7 * Math.PI / N) * 2;
// adding site
g.nodes.push({
id: 7875,
label: 'Christine Fanaud',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/12/research.pasteur.fr_c_fanaud-1-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/christine-fanaud/',
x: x_site,
y: y_site,
size: 16,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 262037875,
size: 0.5,
source: 26203,
target: 7875 });
//check if content already exist
x_site = Math.cos(2 * 8 * Math.PI / N) * 2;
y_site = Math.sin(2 * 8 * Math.PI / N) * 2;
// adding site
g.nodes.push({
id: 8600,
label: 'Hélène Laude',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2018/10/research_pasteur-photo_helene_laude-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/helene-laude/',
x: x_site,
y: y_site,
size: 16,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 262038600,
size: 0.5,
source: 26203,
target: 8600 });
//check if content already exist
x_site = Math.cos(2 * 9 * Math.PI / N) * 2;
y_site = Math.sin(2 * 9 * Math.PI / N) * 2;
// adding site
g.nodes.push({
id: 154420,
label: 'Elsa Liévin',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2021/02/research_pasteur-elsa-lievin-img-3299-facetune-15-08-2020-18-50-37-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/elsa-lievin/',
x: x_site,
y: y_site,
size: 16,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 26203154420,
size: 0.5,
source: 26203,
target: 154420 });
//check if content already exist
x_site = Math.cos(2 * 10 * Math.PI / N) * 2;
y_site = Math.sin(2 * 10 * Math.PI / N) * 2;
// adding site
g.nodes.push({
id: 57470,
label: 'Blanca Liliana Perlaza',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2016/06/research.pasteur.fr_blanca-liliana-perlaza-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/blanca-liliana-perlaza-2/',
x: x_site,
y: y_site,
size: 16,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 2620357470,
size: 0.5,
source: 26203,
target: 57470 });
//check if content already exist
x_site = Math.cos(2 * 11 * Math.PI / N) * 2;
y_site = Math.sin(2 * 11 * Math.PI / N) * 2;
// adding site
g.nodes.push({
id: 147868,
label: 'Louise Perrin de Facci',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/member/fr-louise-perrin-de-faci/',
x: x_site,
y: y_site,
size: 16,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 26203147868,
size: 0.5,
source: 26203,
target: 147868 });
//check if content already exist
x_site = Math.cos(2 * 12 * Math.PI / N) * 2;
y_site = Math.sin(2 * 12 * Math.PI / N) * 2;
// adding site
g.nodes.push({
id: 98371,
label: 'Linda Sangari',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2018/11/research_pasteur-linda.jpg-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/linda-sangari/',
x: x_site,
y: y_site,
size: 16,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 2620398371,
size: 0.5,
source: 26203,
target: 98371 });
//check if content already exist
x_site = Math.cos(2 * 13 * Math.PI / N) * 2;
y_site = Math.sin(2 * 13 * Math.PI / N) * 2;
// adding site
g.nodes.push({
id: 154423,
label: 'Ayla Zayoud',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/member/ayla-zayoud/',
x: x_site,
y: y_site,
size: 16,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 26203154423,
size: 0.5,
source: 26203,
target: 154423 });
//check if content already exist
x_site = Math.cos(2 * 14 * Math.PI / N) * 2;
y_site = Math.sin(2 * 14 * Math.PI / N) * 2;
// adding site
g.nodes.push({
id: 7878,
label: 'Marie-Noelle Ungeheuer',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_institutpasteur_43070-e1437491181428-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/marie-noelle-ungeheuer/',
x: x_site,
y: y_site,
size: 16,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 262037878,
size: 0.5,
source: 26203,
target: 7878 });
// update positions
x_node = Math.cos(2 * 0 * Math.PI / N) * 10;
y_node = Math.sin(2 * 0 * Math.PI / N) * 10;
N=28
// adding node
var x_node = Math.cos(2 * 0 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 0 * Math.PI / N) * 10;
g.nodes.push({
id: 148550,
label: 'PROJECT: ANR-VIROMET-Uncovering the VIRome of archaeal METhanogens',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/project/anr-viromet/',
size: 24,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 26203148550,
size: 0.5,
source: 26203,
target: 148550 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4287,
label: 'Mart Krupovic',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2019/05/research_pasteur-mart_krupovic-1-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/mart-krupovic/',
x: x_site,
y: y_site,
size: 10,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 1485504287,
size: 0.5,
source: 148550,
target: 4287 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 78458,
label: 'Virginija Cvirkaite-Krupovic',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2016/10/research.pasteur.fr_vg-2-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/virginija-cvirkaite-krupovic/',
x: x_site,
y: y_site,
size: 10,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 14855078458,
size: 0.5,
source: 148550,
target: 78458 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 57997,
label: 'Guillaume Borrel',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/11/research.pasteur.fr_photo-guillaume-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/guillaume-borrel/',
x: x_site,
y: y_site,
size: 10,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 14855057997,
size: 0.5,
source: 148550,
target: 57997 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 90107,
label: 'Najwa Taib',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2017/05/research_pasteur-photo_ntaib-150x150.jpeg',
page_url: 'https://research.pasteur.fr/en/member/najwa-taib/',
x: x_site,
y: y_site,
size: 10,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 14855090107,
size: 0.5,
source: 148550,
target: 90107 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4286,
label: 'Simonetta Gribaldo',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2017/10/research_pasteur-photo-simo2-150x150.png',
page_url: 'https://research.pasteur.fr/en/member/simonetta-gribaldo/',
x: x_site,
y: y_site,
size: 10,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 1485504286,
size: 0.5,
source: 148550,
target: 4286 });
// adding node
var x_node = Math.cos(2 * 1 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 1 * Math.PI / N) * 10;
g.nodes.push({
id: 144997,
label: 'CENTER: Biological Resource Center of the Institut Pasteur (CRBIP)',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/center/biological-resource-center-of-the-institut-pasteur-crbip/',
size: 24,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 26203144997,
size: 0.5,
source: 26203,
target: 144997 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 144350,
label: 'Estelle Boulanger',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2020/08/research_pasteur-eb-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/estelle-boulanger/',
x: x_site,
y: y_site,
size: 10,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 144997144350,
size: 0.5,
source: 144997,
target: 144350 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 2495,
label: 'Sylvain Brisse',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/03/9c960524567ea360a3_l_2ae2a-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/sylvain-brisse/',
x: x_site,
y: y_site,
size: 10,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 1449972495,
size: 0.5,
source: 144997,
target: 2495 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 111900,
label: 'Mery Piña',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2018/10/research_pasteur-meryhec-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/mery-pina/',
x: x_site,
y: y_site,
size: 10,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 144997111900,
size: 0.5,
source: 144997,
target: 111900 });
// adding node
var x_node = Math.cos(2 * 2 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 2 * Math.PI / N) * 10;
g.nodes.push({
id: 143611,
label: 'NEWS: Curie-O-SA : étude de la réponse immunitaire contre le virus SARS-CoV2',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/news/curi-o-sa/',
size: 24,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 26203143611,
size: 0.5,
source: 26203,
target: 143611 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
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page_url: 'https://research.pasteur.fr/en/epartner/gerard-socie/',
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label: 'Philippe Musette',
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url: 'https://research.pasteur.fr/wp-content/uploads/2016/11/research.pasteur.fr_phm-132x150.png',
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label: 'Sophie Matheron',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2016/12/research.pasteur.fr_img_6072-150x150.jpg',
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label: 'Corinne Richard-Miceli',
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label: 'Jean-Ralph Zahar',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2016/11/research.pasteur.fr_capture-d’écran-2016-11-28-à-18.44.57-150x150.png',
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label: 'Caroline Charlier-Woerther',
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n.size = n.size + 10;
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// adding node
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var y_node = Math.sin(2 * 25 * Math.PI / N) * 10;
g.nodes.push({
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x: x_node,
y: y_node,
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2017/12/research_pasteur-microbiote-2-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/project/participer-a-la-recherche-en-tant-que-volontaire-sain/',
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//link to content
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//check if content already exist
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y_site = y_node + ((Math.random() * 2)-1) - offset_left;
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// adding site
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label: 'Gloria Morizot',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/12/research.pasteur.fr_g_morizot-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/gloria-morizot/',
x: x_site,
y: y_site,
size: 10,
color: '#DDDDDD'
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//check if content already exist
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if (n.id == 26203) {
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//check if content already exist
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n.size = n.size + 10;
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//link to content
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//check if content already exist
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//link to content
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//check if content already exist
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n.size = n.size + 10;
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biggest_node_size = n.size;
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n.size = biggest_node_size;
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// adding site
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label: 'Sean Kennedy',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/03/Kennedy-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/sean-kennedy/',
x: x_site,
y: y_site,
size: 10,
color: '#DDDDDD'
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size: 0.5,
source: 94465,
target: 2669 });
//check if content already exist
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x_site = x_node + ((Math.random() * 2)-1) - offset_left;
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// adding site
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id: 4764,
label: 'Anavaj Sakuntabhai',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/09/research.pasteur.fr_l1000961-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/anavaj-sakuntabhai/',
x: x_site,
y: y_site,
size: 10,
color: '#DDDDDD'
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size: 0.5,
source: 94465,
target: 80515 });
//check if content already exist
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n.size = biggest_node_size;
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//link to content
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source: 94465,
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//check if content already exist
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var y_node = Math.sin(2 * 26 * Math.PI / N) * 10;
g.nodes.push({
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label: 'PROJECT: Pathogen discovery',
x: x_node,
y: y_node,
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/09/research.pasteur.fr_491423virus-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/project/pathogen-discovery/',
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color: '#DDDDDD'
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size: 0.5,
source: 26203,
target: 43650 });
//check if content already exist
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//link to content
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size: 0.5,
source: 43650,
target: 4479 });
//check if content already exist
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x_site = x_node + ((Math.random() * 2)-1) - offset_left;
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}
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y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 8234,
label: 'Aurélie Du Thanh',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/09/research.pasteur.fr_aurelie1-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/aurelie-du-thanh/',
x: x_site,
y: y_site,
size: 10,
color: '#DDDDDD'
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size: 0.5,
source: 43650,
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x_site = x_node + ((Math.random() * 2)-1) + offset_left;
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y_site = y_node + ((Math.random() * 2)-1) - offset_left;
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y_site = y_node + ((Math.random() * 2)-1) + offset_left;
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// adding site
g.nodes.push({
id: 8231,
label: 'Marie Ramirez',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/09/research.pasteur.fr_marie-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/marie-ramirez/',
x: x_site,
y: y_site,
size: 10,
color: '#DDDDDD'
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y_site = y_node + ((Math.random() * 2)-1) - offset_left;
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// adding site
g.nodes.push({
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label: 'Antoine Gessain',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/09/research.pasteur.fr_a.g-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/antoine-gessain/',
x: x_site,
y: y_site,
size: 10,
color: '#DDDDDD'
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size: 0.5,
source: 43650,
target: 4328 });
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y_site = y_node + ((Math.random() * 2)-1) - offset_left;
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y_site = y_node + ((Math.random() * 2)-1) + offset_left;
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// adding site
g.nodes.push({
id: 3977,
label: 'Hervé Bourhy',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_fig50-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/herve-bourhy/',
x: x_site,
y: y_site,
size: 10,
color: '#DDDDDD'
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size: 0.5,
source: 43650,
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if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
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y_site = y_node + ((Math.random() * 2)-1) - offset_left;
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y_site = y_node + ((Math.random() * 2)-1) + offset_left;
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// adding site
g.nodes.push({
id: 4162,
label: 'Francis Delpeyroux',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/08/research.pasteur.fr_photo-mooc-cv-fr.delp_.-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/francis-delpeyroux/',
x: x_site,
y: y_site,
size: 10,
color: '#DDDDDD'
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//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
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x_site = x_node + ((Math.random() * 2)-1) + offset_left;
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y_site = y_node + ((Math.random() * 2)-1) - offset_left;
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y_site = y_node + ((Math.random() * 2)-1) + offset_left;
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// adding site
g.nodes.push({
id: 4508,
label: 'Jean-Claude Manuguerra',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_fig43-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/jean-claude-manuguerra/',
x: x_site,
y: y_site,
size: 10,
color: '#DDDDDD'
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if (n.id == 4470) {
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if ( n.size > biggest_node_size ){
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g.nodes.forEach(function(n) {
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target: 4470 });
//check if content already exist
// update node size depending on the amount of edges
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g.nodes.forEach(function(n) {
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size: 0.5,
source: 43650,
target: 4474 });
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y_site = y_node + ((Math.random() * 2)-1) - offset_left;
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y_site = y_node + ((Math.random() * 2)-1) + offset_left;
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// adding site
g.nodes.push({
id: 137394,
label: 'Sarah Temmam',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2020/01/research_pasteur-photo_identite_sarah-temmam-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/sarah-temmam/',
x: x_site,
y: y_site,
size: 10,
color: '#DDDDDD'
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if (x_node<0){
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x_site = x_node + ((Math.random() * 2)-1) + offset_left;
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y_site = y_node + ((Math.random() * 2)-1) - offset_left;
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y_site = y_node + ((Math.random() * 2)-1) + offset_left;
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// adding site
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label: 'Delphine Chretien',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/member/delphine-chretien/',
x: x_site,
y: y_site,
size: 10,
color: '#DDDDDD'
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size: 0.5,
source: 43650,
target: 137400 });
//check if content already exist
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x_site = x_node + ((Math.random() * 2)-1) + offset_left;
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y_site = y_node + ((Math.random() * 2)-1) - offset_left;
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y_site = y_node + ((Math.random() * 2)-1) + offset_left;
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// adding site
g.nodes.push({
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label: 'Eric Troadec',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2020/02/research_pasteur-troadec-eric-2360_b-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/eric-troadec/',
x: x_site,
y: y_site,
size: 10,
color: '#DDDDDD'
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y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 1633,
label: 'Christiane Bouchier',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/member/christiane-bouchier/',
x: x_site,
y: y_site,
size: 10,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 436501633,
size: 0.5,
source: 43650,
target: 1633 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 80005,
label: 'Thomas Bigot',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2016/11/research_pasteur-thomas-bigot-pour-profil2-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/thomas-bigot/',
x: x_site,
y: y_site,
size: 10,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 4365080005,
size: 0.5,
source: 43650,
target: 80005 });
// adding node
var x_node = Math.cos(2 * 27 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 27 * Math.PI / N) * 10;
g.nodes.push({
id: 77752,
label: 'PROJECT: Diagmicoll : Collection of bioresources from healthy subjects or patients, in order to develop and validate new diagnosis methods and for undertaking infectious and tropical diseases diagnosis expert assessments',
x: x_node,
y: y_node,
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2016/10/research_pasteur-diagmicoll-volontaire-icareb-150x150.png',
page_url: 'https://research.pasteur.fr/en/project/diagmicoll/',
size: 24,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 2620377752,
size: 0.5,
source: 26203,
target: 77752 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 7870) {
n.size = n.size + 10;
if ( n.size > biggest_node_size ){
biggest_node_size = n.size;
}
}
});
g.nodes.forEach(function(n) {
if (n.id == 26203) {
if ( n.size < biggest_node_size ){
n.size = biggest_node_size;
}
}
});
//link to content
g.edges.push({
id: 777527870,
size: 0.5,
source: 77752,
target: 7870 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4958) {
n.size = n.size + 10;
if ( n.size > biggest_node_size ){
biggest_node_size = n.size;
}
}
});
g.nodes.forEach(function(n) {
if (n.id == 26203) {
if ( n.size < biggest_node_size ){
n.size = biggest_node_size;
}
}
});
//link to content
g.edges.push({
id: 777524958,
size: 0.5,
source: 77752,
target: 4958 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 2998) {
n.size = n.size + 10;
if ( n.size > biggest_node_size ){
biggest_node_size = n.size;
}
}
});
g.nodes.forEach(function(n) {
if (n.id == 26203) {
if ( n.size < biggest_node_size ){
n.size = biggest_node_size;
}
}
});
//link to content
g.edges.push({
id: 777522998,
size: 0.5,
source: 77752,
target: 2998 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 7874) {
n.size = n.size + 10;
if ( n.size > biggest_node_size ){
biggest_node_size = n.size;
}
}
});
g.nodes.forEach(function(n) {
if (n.id == 26203) {
if ( n.size < biggest_node_size ){
n.size = biggest_node_size;
}
}
});
//link to content
g.edges.push({
id: 777527874,
size: 0.5,
source: 77752,
target: 7874 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 7879) {
n.size = n.size + 10;
if ( n.size > biggest_node_size ){
biggest_node_size = n.size;
}
}
});
g.nodes.forEach(function(n) {
if (n.id == 26203) {
if ( n.size < biggest_node_size ){
n.size = biggest_node_size;
}
}
});
//link to content
g.edges.push({
id: 777527879,
size: 0.5,
source: 77752,
target: 7879 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 7875) {
n.size = n.size + 10;
if ( n.size > biggest_node_size ){
biggest_node_size = n.size;
}
}
});
g.nodes.forEach(function(n) {
if (n.id == 26203) {
if ( n.size < biggest_node_size ){
n.size = biggest_node_size;
}
}
});
//link to content
g.edges.push({
id: 777527875,
size: 0.5,
source: 77752,
target: 7875 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 8600) {
n.size = n.size + 10;
if ( n.size > biggest_node_size ){
biggest_node_size = n.size;
}
}
});
g.nodes.forEach(function(n) {
if (n.id == 26203) {
if ( n.size < biggest_node_size ){
n.size = biggest_node_size;
}
}
});
//link to content
g.edges.push({
id: 777528600,
size: 0.5,
source: 77752,
target: 8600 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 7880) {
n.size = n.size + 10;
if ( n.size > biggest_node_size ){
biggest_node_size = n.size;
}
}
});
g.nodes.forEach(function(n) {
if (n.id == 26203) {
if ( n.size < biggest_node_size ){
n.size = biggest_node_size;
}
}
});
//link to content
g.edges.push({
id: 777527880,
size: 0.5,
source: 77752,
target: 7880 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 57470) {
n.size = n.size + 10;
if ( n.size > biggest_node_size ){
biggest_node_size = n.size;
}
}
});
g.nodes.forEach(function(n) {
if (n.id == 26203) {
if ( n.size < biggest_node_size ){
n.size = biggest_node_size;
}
}
});
//link to content
g.edges.push({
id: 7775257470,
size: 0.5,
source: 77752,
target: 57470 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 4202) {
n.size = n.size + 10;
if ( n.size > biggest_node_size ){
biggest_node_size = n.size;
}
}
});
g.nodes.forEach(function(n) {
if (n.id == 26203) {
if ( n.size < biggest_node_size ){
n.size = biggest_node_size;
}
}
});
//link to content
g.edges.push({
id: 777524202,
size: 0.5,
source: 77752,
target: 4202 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 98371) {
n.size = n.size + 10;
if ( n.size > biggest_node_size ){
biggest_node_size = n.size;
}
}
});
g.nodes.forEach(function(n) {
if (n.id == 26203) {
if ( n.size < biggest_node_size ){
n.size = biggest_node_size;
}
}
});
//link to content
g.edges.push({
id: 7775298371,
size: 0.5,
source: 77752,
target: 98371 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 7878) {
n.size = n.size + 10;
if ( n.size > biggest_node_size ){
biggest_node_size = n.size;
}
}
});
g.nodes.forEach(function(n) {
if (n.id == 26203) {
if ( n.size < biggest_node_size ){
n.size = biggest_node_size;
}
}
});
//link to content
g.edges.push({
id: 777527878,
size: 0.5,
source: 77752,
target: 7878 });
var s = new sigma({
//container: document.getElementById('graph-main'),
graph: g,
renderer: {
// IMPORTANT:
// This works only with the canvas renderer, so the
// renderer type set as "canvas" is necessary here.
container: document.getElementById('graph-main'),
type: 'canvas'
},
settings: {
minNodeSize: 12,
maxNodeSize: 30,
mouseWheelEnabled: false,
font: 'Montserrat',
labelThreshold:25,
borderSize:1,
defaultNodeBorderColor: '#333',
sideMargin:25,
}
});
// We first need to save the original colors of our
// nodes and edges, like this:
s.graph.nodes().forEach(function(n) {
n.originalColor = n.color;
//console.log(n.id);
//console.log(s.graph.nodes(n.id));
});
s.graph.edges().forEach(function(e) {
e.originalColor = e.color;
});
// When a node is clicked, we check for each node
// if it is a neighbor of the clicked one. If not,
// we set its color as grey, and else, it takes its
// original color.
// We do the same for the edges, and we only keep
// edges that have both extremities colored.
s.bind('clickNode', function(e) {
var nodeId = e.data.node.id,
toKeep = s.graph.neighbors(nodeId);
toKeep[nodeId] = e.data.node;
s.graph.nodes().forEach(function(n) {
if (toKeep[n.id])
n.color = '#35a9f5';
else
n.color = '#dddddd';
});
s.graph.edges().forEach(function(e) {
if (toKeep[e.source] && toKeep[e.target])
e.color = '#35a9f5';
else
e.color = '#dddddd';
});
// Since the data has been modified, we need to
// call the refresh method to make the colors
// update effective.
s.refresh();
});
// When the stage is clicked, we just color each
// node and edge with its original color.
s.bind('clickStage', function(e) {
s.graph.nodes().forEach(function(n) {
n.color = n.originalColor;
});
s.graph.edges().forEach(function(e) {
e.color = e.originalColor;
});
// Same as in the previous event:
s.refresh();
});
s.bind("doubleClickNode", function (e) {
$("#canvas-wrap, .sigma-scene, .sigma-mouse").val();
ajax_load_page( e.data.node.page_url );
});
var c = s.camera;
s.bind("rightClickStage", function (e) {
sigma.misc.animation.camera(c, {
ratio: c.ratio * c.settings('zoomingRatio')
}, {
duration: 200
});
});
// Configure the noverlap layout:
var noverlapListener = s.configNoverlap({
nodeMargin: 10,
scaleNodes: 0.3,
gridSize: 1,
easing: 'quadraticInOut', // animation transition function
duration: 4000 // animation duration. Long here for the purposes of this example only
});
// Bind the events:
noverlapListener.bind('start stop interpolate', function(e) {
//console.log(e.type);
if(e.type === 'start') {
//console.time('noverlap');
}
if(e.type === 'interpolate') {
//console.timeEnd('noverlap');
}
});
// Start the layout:
s.startNoverlap();
//s.refresh();
// Initialize the dragNodes plugin:
var dragListener = sigma.plugins.dragNodes(s, s.renderers[0]);
dragListener.bind('startdrag', function(event) {
});
dragListener.bind('drag', function(event) {
});
dragListener.bind('drop', function(event) {
});
dragListener.bind('dragend', function(event) {
});