GUIDE
- Left-click and drag the background to move the graph
- Left-click and drag the nodes to reorganize
- Left-click a node to view first level connections
- Double left-click a node to navigate to its page
- Double left-click the background to zoom in
- Right-click the background to zoom out
sigma.utils.pkg('sigma.canvas.nodes');
sigma.canvas.nodes.image = (function() {
var _cache = {},
_loading = {},
_callbacks = {};
// Return the renderer itself:
var renderer = function(node, context, settings) {
var args = arguments,
prefix = settings('prefix') || '',
size = node[prefix + 'size'],
color = node.color || settings('defaultNodeColor'),
url = node.url;
if (_cache[url]) {
context.save();
// Draw the clipping disc:
context.beginPath();
context.arc(
node[prefix + 'x'],
node[prefix + 'y'],
node[prefix + 'size'],
0,
Math.PI * 2,
true
);
context.closePath();
context.clip();
// Draw the image
context.drawImage(
_cache[url],
node[prefix + 'x'] - size,
node[prefix + 'y'] - size,
2 * size,
2 * size
);
// Quit the "clipping mode":
context.restore();
// Draw the border:
context.beginPath();
context.arc(
node[prefix + 'x'],
node[prefix + 'y'],
node[prefix + 'size'],
0,
Math.PI * 2,
true
);
context.lineWidth = 1;
context.strokeStyle = node.color || settings('defaultNodeColor');
context.stroke();
} else {
sigma.canvas.nodes.image.cache(url);
sigma.canvas.nodes.def.apply(
sigma.canvas.nodes,
args
);
}
};
// Let's add a public method to cache images, to make it possible to
// preload images before the initial rendering:
renderer.cache = function(url, callback) {
if (callback)
_callbacks[url] = callback;
if (_loading[url])
return;
var img = new Image();
img.onload = function() {
_loading[url] = false;
_cache[url] = img;
if (_callbacks[url]) {
_callbacks[url].call(this, img);
delete _callbacks[url];
}
};
_loading[url] = true;
img.src = url;
};
return renderer;
})();
var i,
s,
o,
offset_left = 0.5,
N = 1,
E = 40,
C = 5,
d = 0.5,
cs = [],
g = {
nodes: [],
edges: []
};
if (!sigma.classes.graph.hasMethod('neighbors')){
sigma.classes.graph.addMethod('neighbors', function(nodeId) {
var k,
neighbors = {},
index = this.allNeighborsIndex[nodeId] || {};
for (k in index)
neighbors[k] = this.nodesIndex[k];
return neighbors;
});
}
//adding the central node
g.nodes.push({
id: 22,
label: 'Microbiology',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/06/research.pasteur.fr_microbiology-150x150.jpg',
x: 0,
y: 0,
size: 30,
color: '#DDDDDD'
});
var x_node = Math.cos(2 * 0 * Math.PI / N) * 2;
var y_node = Math.sin(2 * 0 * Math.PI / N) * 2;
N=4
//check if content already exist
x_site = Math.cos(2 * 0 * Math.PI / N) * 2;
y_site = Math.sin(2 * 0 * Math.PI / N) * 2;
// adding site
g.nodes.push({
id: 134269,
label: 'Rebecca Pavillard',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2019/10/research_pasteur-pavillard-150x150.png',
page_url: 'https://research.pasteur.fr/en/member/rebecca-pavillard/',
x: x_site,
y: y_site,
size: 10,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 22134269,
size: 0.5,
source: 22,
target: 134269 });
//check if content already exist
x_site = Math.cos(2 * 1 * Math.PI / N) * 2;
y_site = Math.sin(2 * 1 * Math.PI / N) * 2;
// adding site
g.nodes.push({
id: 157672,
label: 'Olivier Cordin',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/member/olivier-cordin/',
x: x_site,
y: y_site,
size: 10,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 22157672,
size: 0.5,
source: 22,
target: 157672 });
//check if content already exist
x_site = Math.cos(2 * 2 * Math.PI / N) * 2;
y_site = Math.sin(2 * 2 * Math.PI / N) * 2;
// adding site
g.nodes.push({
id: 103214,
label: 'Frédéric Barras',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2018/04/research_pasteur-f-barras-1-150x150.png',
page_url: 'https://research.pasteur.fr/en/member/frederic-barras/',
x: x_site,
y: y_site,
size: 10,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 22103214,
size: 0.5,
source: 22,
target: 103214 });
//check if content already exist
x_site = Math.cos(2 * 3 * Math.PI / N) * 2;
y_site = Math.sin(2 * 3 * Math.PI / N) * 2;
// adding site
g.nodes.push({
id: 4214,
label: 'Bruno Dupuy',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/09/research.pasteur.fr_bruno_id-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/bruno-dupuy/',
x: x_site,
y: y_site,
size: 10,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 224214,
size: 0.5,
source: 22,
target: 4214 });
N=19
// update positions
x_node = Math.cos(2 * 0 * Math.PI / N) * 10;
y_node = Math.sin(2 * 0 * Math.PI / N) * 10;
// adding node
var x_node = Math.cos(2 * 0 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 0 * Math.PI / N) * 10;
g.nodes.push({
id: 126281,
label: 'TEAM: Archaeal Virology',
x: x_node,
y: y_node,
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2019/05/research_pasteur-enarchaeal-virologyfrvirologie-des-archees-gelt-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/team/archaeal-virology/',
size: 10,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 22126281,
size: 0.5,
source: 22,
target: 126281 });
//check if content already exist
if (x_node<0){
x_site = x_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
x_site = x_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
if (y_node<0){
y_site = y_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
y_site = y_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
// adding site
g.nodes.push({
id: 78458,
label: 'Virginija Cvirkaite-Krupovic',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2016/10/research.pasteur.fr_vg-2-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/virginija-cvirkaite-krupovic/',
x: x_site,
y: y_site,
size: 3,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 12628178458,
size: 0.5,
source: 126281,
target: 78458 });
//check if content already exist
if (x_node<0){
x_site = x_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
x_site = x_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
if (y_node<0){
y_site = y_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
y_site = y_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
// adding site
g.nodes.push({
id: 137130,
label: 'Ying Liu',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2020/01/research_pasteur-ying-liu-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/ying-liu/',
x: x_site,
y: y_site,
size: 3,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 126281137130,
size: 0.5,
source: 126281,
target: 137130 });
//check if content already exist
if (x_node<0){
x_site = x_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
x_site = x_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
if (y_node<0){
y_site = y_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
y_site = y_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
// adding site
g.nodes.push({
id: 126125,
label: 'Diana Paola Baquero Uriza',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2020/01/research_pasteur-untitled-2-150x150.png',
page_url: 'https://research.pasteur.fr/en/member/diana-paola-baquero-uriza/',
x: x_site,
y: y_site,
size: 3,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 126281126125,
size: 0.5,
source: 126281,
target: 126125 });
//check if content already exist
if (x_node<0){
x_site = x_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
x_site = x_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
if (y_node<0){
y_site = y_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
y_site = y_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
// adding site
g.nodes.push({
id: 153144,
label: 'Anamarija Butković',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/member/anamarija-butkovic/',
x: x_site,
y: y_site,
size: 3,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 126281153144,
size: 0.5,
source: 126281,
target: 153144 });
//check if content already exist
if (x_node<0){
x_site = x_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
x_site = x_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
if (y_node<0){
y_site = y_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
y_site = y_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
// adding site
g.nodes.push({
id: 168566,
label: 'Miguel Gomez-Raya-Vilanova',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2021/10/research_pasteur-miguel-gomez-raya-vilanova-img-4082-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/miguel-gomez-raya-vilanova/',
x: x_site,
y: y_site,
size: 3,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 126281168566,
size: 0.5,
source: 126281,
target: 168566 });
//check if content already exist
if (x_node<0){
x_site = x_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
x_site = x_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
if (y_node<0){
y_site = y_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
y_site = y_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
// adding site
g.nodes.push({
id: 179080,
label: 'Yifan Zhou',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/member/yifan-zhou/',
x: x_site,
y: y_site,
size: 3,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 126281179080,
size: 0.5,
source: 126281,
target: 179080 });
//check if content already exist
if (x_node<0){
x_site = x_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
x_site = x_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
if (y_node<0){
y_site = y_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
y_site = y_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
// adding site
g.nodes.push({
id: 7054,
label: 'Ana Cova Rodrigues',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_anacova-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/ana-cova-rodrigues/',
x: x_site,
y: y_site,
size: 3,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 1262817054,
size: 0.5,
source: 126281,
target: 7054 });
//check if content already exist
if (x_node<0){
x_site = x_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
x_site = x_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
if (y_node<0){
y_site = y_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
y_site = y_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
// adding site
g.nodes.push({
id: 4287,
label: 'Mart Krupovic',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2019/05/research_pasteur-mart_krupovic-1-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/mart-krupovic/',
x: x_site,
y: y_site,
size: 3,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 1262814287,
size: 0.5,
source: 126281,
target: 4287 });
// adding node
var x_node = Math.cos(2 * 1 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 1 * Math.PI / N) * 10;
g.nodes.push({
id: 111545,
label: 'TEAM: Collection of the Institut Pasteur (CIP)',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/team/collection-of-the-institut-pasteur-cip/',
size: 10,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 22111545,
size: 0.5,
source: 22,
target: 111545 });
//check if content already exist
if (x_node<0){
x_site = x_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
x_site = x_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
if (y_node<0){
y_site = y_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
y_site = y_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
// adding site
g.nodes.push({
id: 8392,
label: 'Sandrine Favre-Rochex',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_favre-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/sandrine-favre-rochex/',
x: x_site,
y: y_site,
size: 3,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 1115458392,
size: 0.5,
source: 111545,
target: 8392 });
//check if content already exist
if (x_node<0){
x_site = x_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
x_site = x_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
if (y_node<0){
y_site = y_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
y_site = y_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
// adding site
g.nodes.push({
id: 6984,
label: 'Gogoa Marthe Goly',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/09/research.pasteur.fr_marthe-goly-bis-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/gogoa-marthe-goly/',
x: x_site,
y: y_site,
size: 3,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 1115456984,
size: 0.5,
source: 111545,
target: 6984 });
//check if content already exist
if (x_node<0){
x_site = x_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
x_site = x_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
if (y_node<0){
y_site = y_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
y_site = y_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
// adding site
g.nodes.push({
id: 6986,
label: 'Estelle Mühle',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/09/research.pasteur.fr_20150904_152255-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/estelle-muhle/',
x: x_site,
y: y_site,
size: 3,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 1115456986,
size: 0.5,
source: 111545,
target: 6986 });
//check if content already exist
if (x_node<0){
x_site = x_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
x_site = x_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
if (y_node<0){
y_site = y_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
y_site = y_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
// adding site
g.nodes.push({
id: 88898,
label: 'Olivier Chesneau',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/member/olivier-chesneau/',
x: x_site,
y: y_site,
size: 3,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 11154588898,
size: 0.5,
source: 111545,
target: 88898 });
//check if content already exist
if (x_node<0){
x_site = x_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
x_site = x_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
if (y_node<0){
y_site = y_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
y_site = y_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
// adding site
g.nodes.push({
id: 1633,
label: 'Christiane Bouchier',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/member/christiane-bouchier/',
x: x_site,
y: y_site,
size: 3,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 1115451633,
size: 0.5,
source: 111545,
target: 1633 });
//check if content already exist
if (x_node<0){
x_site = x_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
x_site = x_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
if (y_node<0){
y_site = y_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
y_site = y_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
// adding site
g.nodes.push({
id: 144350,
label: 'Estelle Boulanger',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2020/08/research_pasteur-eb-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/estelle-boulanger/',
x: x_site,
y: y_site,
size: 3,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 111545144350,
size: 0.5,
source: 111545,
target: 144350 });
//check if content already exist
if (x_node<0){
x_site = x_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
x_site = x_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
if (y_node<0){
y_site = y_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
y_site = y_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
// adding site
g.nodes.push({
id: 146951,
label: 'Gérald Touak',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/member/fr-gerald-touak/',
x: x_site,
y: y_site,
size: 3,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 111545146951,
size: 0.5,
source: 111545,
target: 146951 });
//check if content already exist
if (x_node<0){
x_site = x_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
x_site = x_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
if (y_node<0){
y_site = y_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
y_site = y_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
// adding site
g.nodes.push({
id: 6980,
label: 'Dominique Clermont',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/09/research.pasteur.fr_dominique-clermont-bis-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/dominique-clermont/',
x: x_site,
y: y_site,
size: 3,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 1115456980,
size: 0.5,
source: 111545,
target: 6980 });
// adding node
var x_node = Math.cos(2 * 2 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 2 * Math.PI / N) * 10;
g.nodes.push({
id: 109556,
label: 'TEAM: National Collection of Cultures of Microorganisms',
x: x_node,
y: y_node,
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2019/08/research_pasteur-cncm_institutpasteur_27853-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/team/national-collection-of-cultures-of-microorganisms/',
size: 10,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 22109556,
size: 0.5,
source: 22,
target: 109556 });
//check if content already exist
if (x_node<0){
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label: 'Elisabeth Gutierrez',
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url: 'https://research.pasteur.fr/wp-content/uploads/2021/04/research_pasteur-lou-mondange-photo-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/lou-mondange/',
x: x_site,
y: y_site,
size: 3,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 6195157904,
size: 0.5,
source: 6195,
target: 157904 });
//check if content already exist
if (x_node<0){
x_site = x_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
x_site = x_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
if (y_node<0){
y_site = y_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
y_site = y_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
// adding site
g.nodes.push({
id: 175649,
label: 'Josue Rafael Barquero Chavarria',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2022/02/research_pasteur-josue-rafael-barquero-chavarria-photo-josue-barquero-chavarria2-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/josue-rafael-barquero-chavarria/',
x: x_site,
y: y_site,
size: 3,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 6195175649,
size: 0.5,
source: 6195,
target: 175649 });
//check if content already exist
if (x_node<0){
x_site = x_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
x_site = x_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
if (y_node<0){
y_site = y_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
y_site = y_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
// adding site
g.nodes.push({
id: 101985,
label: 'Laura Guichard',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2018/11/research_pasteur-laura-2018-11-28-a-11.47.39-150x150.png',
page_url: 'https://research.pasteur.fr/en/member/laura-guichard/',
x: x_site,
y: y_site,
size: 3,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 6195101985,
size: 0.5,
source: 6195,
target: 101985 });
//check if content already exist
if (x_node<0){
x_site = x_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
x_site = x_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
if (y_node<0){
y_site = y_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
y_site = y_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
// adding site
g.nodes.push({
id: 4094,
label: 'Javier Pizarro-Cerda',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/09/research.pasteur.fr_javier-pizarro-cerda-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/javier-pizarro-cerda/',
x: x_site,
y: y_site,
size: 3,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 61954094,
size: 0.5,
source: 6195,
target: 4094 });
// adding node
var x_node = Math.cos(2 * 18 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 18 * Math.PI / N) * 10;
g.nodes.push({
id: 6189,
label: 'TEAM: Biology of Gram-Positive Pathogens',
x: x_node,
y: y_node,
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_institutpasteur_27823-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/team/biology-of-gram-positive-pathogens/',
size: 10,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 226189,
size: 0.5,
source: 22,
target: 6189 });
//check if content already exist
if (x_node<0){
x_site = x_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
x_site = x_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
if (y_node<0){
y_site = y_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
y_site = y_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
// adding site
g.nodes.push({
id: 4905,
label: 'Shaynoor Dramsi',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2017/09/research_pasteur-shaynoor-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/shaynoor-dramsi/',
x: x_site,
y: y_site,
size: 3,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 61894905,
size: 0.5,
source: 6189,
target: 4905 });
//check if content already exist
if (x_node<0){
x_site = x_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
x_site = x_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
if (y_node<0){
y_site = y_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
y_site = y_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
// adding site
g.nodes.push({
id: 4909,
label: 'Tarek Msadek',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_ha36-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/tarek-msadek/',
x: x_site,
y: y_site,
size: 3,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 61894909,
size: 0.5,
source: 6189,
target: 4909 });
//check if content already exist
if (x_node<0){
x_site = x_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
x_site = x_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
if (y_node<0){
y_site = y_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
y_site = y_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
// adding site
g.nodes.push({
id: 4902,
label: 'Claire Poyart',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_ha30-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/claire-poyart/',
x: x_site,
y: y_site,
size: 3,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 61894902,
size: 0.5,
source: 6189,
target: 4902 });
//check if content already exist
if (x_node<0){
x_site = x_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
x_site = x_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
if (y_node<0){
y_site = y_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
y_site = y_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
// adding site
g.nodes.push({
id: 4910,
label: 'Bruno Perichon',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_ha32-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/bruno-perichon/',
x: x_site,
y: y_site,
size: 3,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 61894910,
size: 0.5,
source: 6189,
target: 4910 });
//check if content already exist
if (x_node<0){
x_site = x_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
x_site = x_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
if (y_node<0){
y_site = y_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
y_site = y_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
// adding site
g.nodes.push({
id: 4907,
label: 'Arnaud Firon',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/10/research.pasteur.fr_photo-9-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/arnaud-firon/',
x: x_site,
y: y_site,
size: 3,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 61894907,
size: 0.5,
source: 6189,
target: 4907 });
//check if content already exist
if (x_node<0){
x_site = x_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
x_site = x_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
if (y_node<0){
y_site = y_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
y_site = y_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
// adding site
g.nodes.push({
id: 4908,
label: 'Pierre Alexandr Kaminski',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_ha25-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/pierre-alexandr-kaminski/',
x: x_site,
y: y_site,
size: 3,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 61894908,
size: 0.5,
source: 6189,
target: 4908 });
//check if content already exist
if (x_node<0){
x_site = x_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
x_site = x_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
if (y_node<0){
y_site = y_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
y_site = y_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
// adding site
g.nodes.push({
id: 917,
label: 'Odile Sismeiro',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/02/OdileSismeiro-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/odile-sismeiro/',
x: x_site,
y: y_site,
size: 3,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 6189917,
size: 0.5,
source: 6189,
target: 917 });
//check if content already exist
if (x_node<0){
x_site = x_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
x_site = x_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
if (y_node<0){
y_site = y_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
y_site = y_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
// adding site
g.nodes.push({
id: 8225,
label: 'Myriam Gominet',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2016/05/research.pasteur.fr_2016-05-24-09.24.54-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/myriam-gominet/',
x: x_site,
y: y_site,
size: 3,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 61898225,
size: 0.5,
source: 6189,
target: 8225 });
//check if content already exist
if (x_node<0){
x_site = x_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
x_site = x_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
if (y_node<0){
y_site = y_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
y_site = y_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
// adding site
g.nodes.push({
id: 8224,
label: 'Laurence du Merle',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_ha33-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/laurence-du-merle/',
x: x_site,
y: y_site,
size: 3,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 61898224,
size: 0.5,
source: 6189,
target: 8224 });
//check if content already exist
if (x_node<0){
x_site = x_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
x_site = x_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
if (y_node<0){
y_site = y_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
y_site = y_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
// adding site
g.nodes.push({
id: 89828,
label: 'Ewa Pasquereau-Kotula',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2017/09/research_pasteur-ewa-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/ewa-pasquereau-kotula/',
x: x_site,
y: y_site,
size: 3,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 618989828,
size: 0.5,
source: 6189,
target: 89828 });
//check if content already exist
if (x_node<0){
x_site = x_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
x_site = x_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
if (y_node<0){
y_site = y_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
y_site = y_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
// adding site
g.nodes.push({
id: 127552,
label: 'Terry Brissac',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2019/06/research_pasteur-terry-brissac-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/fr-ferry-brissac/',
x: x_site,
y: y_site,
size: 3,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 6189127552,
size: 0.5,
source: 6189,
target: 127552 });
//check if content already exist
//link to content
g.edges.push({
id: 61898320,
size: 0.5,
source: 6189,
target: 8320 });
//check if content already exist
//link to content
g.edges.push({
id: 618968493,
size: 0.5,
source: 6189,
target: 68493 });
//check if content already exist
if (x_node<0){
x_site = x_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
x_site = x_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
if (y_node<0){
y_site = y_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
y_site = y_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
// adding site
g.nodes.push({
id: 135968,
label: 'Cosme Claverie',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2019/12/research_pasteur-cosme-claverie-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/cosme-claverie/',
x: x_site,
y: y_site,
size: 3,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 6189135968,
size: 0.5,
source: 6189,
target: 135968 });
//check if content already exist
if (x_node<0){
x_site = x_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
x_site = x_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
if (y_node<0){
y_site = y_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
y_site = y_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
// adding site
g.nodes.push({
id: 4913,
label: 'Patrick Trieu-Cuot',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_photo_p_trieu_cuot_aout01-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/patrick-trieu-cuot/',
x: x_site,
y: y_site,
size: 3,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 61894913,
size: 0.5,
source: 6189,
target: 4913 });
var s = new sigma({
//container: document.getElementById('graph-main'),
graph: g,
renderer: {
// IMPORTANT:
// This works only with the canvas renderer, so the
// renderer type set as "canvas" is necessary here.
container: document.getElementById('graph-main'),
type: 'canvas'
},
settings: {
minNodeSize: 6,
maxNodeSize: 30,
mouseWheelEnabled: false,
font: 'Montserrat',
labelThreshold:25,
borderSize:1,
defaultNodeBorderColor: '#333',
sideMargin:25,
}
});
// We first need to save the original colors of our
// nodes and edges, like this:
s.graph.nodes().forEach(function(n) {
n.originalColor = n.color;
//console.log(n.id);
//console.log(s.graph.nodes(n.id));
});
s.graph.edges().forEach(function(e) {
e.originalColor = e.color;
});
// When a node is clicked, we check for each node
// if it is a neighbor of the clicked one. If not,
// we set its color as grey, and else, it takes its
// original color.
// We do the same for the edges, and we only keep
// edges that have both extremities colored.
s.bind('clickNode', function(e) {
var nodeId = e.data.node.id,
toKeep = s.graph.neighbors(nodeId);
toKeep[nodeId] = e.data.node;
s.graph.nodes().forEach(function(n) {
if (toKeep[n.id])
n.color = '#35a9f5';
else
n.color = '#dddddd';
});
s.graph.edges().forEach(function(e) {
if (toKeep[e.source] && toKeep[e.target])
e.color = '#35a9f5';
else
e.color = '#dddddd';
});
// Since the data has been modified, we need to
// call the refresh method to make the colors
// update effective.
s.refresh();
});
// When the stage is clicked, we just color each
// node and edge with its original color.
s.bind('clickStage', function(e) {
s.graph.nodes().forEach(function(n) {
n.color = n.originalColor;
});
s.graph.edges().forEach(function(e) {
e.color = e.originalColor;
});
// Same as in the previous event:
s.refresh();
});
s.bind("doubleClickNode", function (e) {
$("#canvas-wrap, .sigma-scene, .sigma-mouse").val();
ajax_load_page( e.data.node.page_url );
});
var c = s.camera;
s.bind("rightClickStage", function (e) {
sigma.misc.animation.camera(c, {
ratio: c.ratio * c.settings('zoomingRatio')
}, {
duration: 200
});
});
// Configure the noverlap layout:
var noverlapListener = s.configNoverlap({
nodeMargin: 5,
scaleNodes: 0.3,
gridSize: 1,
easing: 'quadraticInOut', // animation transition function
duration: 4000 // animation duration. Long here for the purposes of this example only
});
// Bind the events:
noverlapListener.bind('start stop interpolate', function(e) {
//console.log(e.type);
if(e.type === 'start') {
//console.time('noverlap');
}
if(e.type === 'interpolate') {
//console.timeEnd('noverlap');
}
});
// Start the layout:
s.startNoverlap();
//s.refresh();
// Initialize the dragNodes plugin:
var dragListener = sigma.plugins.dragNodes(s, s.renderers[0]);
dragListener.bind('startdrag', function(event) {
});
dragListener.bind('drag', function(event) {
});
dragListener.bind('drop', function(event) {
});
dragListener.bind('dragend', function(event) {
});