GUIDE
- Left-click and drag the background to move the graph
- Left-click and drag the nodes to reorganize
- Left-click a node to view first level connections
- Double left-click a node to navigate to its page
- Double left-click the background to zoom in
- Right-click the background to zoom out
sigma.utils.pkg('sigma.canvas.nodes');
sigma.canvas.nodes.image = (function() {
var _cache = {},
_loading = {},
_callbacks = {};
// Return the renderer itself:
var renderer = function(node, context, settings) {
var args = arguments,
prefix = settings('prefix') || '',
size = node[prefix + 'size'],
color = node.color || settings('defaultNodeColor'),
url = node.url;
if (_cache[url]) {
context.save();
// Draw the clipping disc:
context.beginPath();
context.arc(
node[prefix + 'x'],
node[prefix + 'y'],
node[prefix + 'size'],
0,
Math.PI * 2,
true
);
context.closePath();
context.clip();
// Draw the image
context.drawImage(
_cache[url],
node[prefix + 'x'] - size,
node[prefix + 'y'] - size,
2 * size,
2 * size
);
// Quit the "clipping mode":
context.restore();
// Draw the border:
context.beginPath();
context.arc(
node[prefix + 'x'],
node[prefix + 'y'],
node[prefix + 'size'],
0,
Math.PI * 2,
true
);
context.lineWidth = 1;
context.strokeStyle = node.color || settings('defaultNodeColor');
context.stroke();
} else {
sigma.canvas.nodes.image.cache(url);
sigma.canvas.nodes.def.apply(
sigma.canvas.nodes,
args
);
}
};
// Let's add a public method to cache images, to make it possible to
// preload images before the initial rendering:
renderer.cache = function(url, callback) {
if (callback)
_callbacks[url] = callback;
if (_loading[url])
return;
var img = new Image();
img.onload = function() {
_loading[url] = false;
_cache[url] = img;
if (_callbacks[url]) {
_callbacks[url].call(this, img);
delete _callbacks[url];
}
};
_loading[url] = true;
img.src = url;
};
return renderer;
})();
var i,
s,
o,
offset_left = 0.5,
N = 1,
E = 40,
C = 5,
d = 0.5,
cs = [],
g = {
nodes: [],
edges: []
};
if (!sigma.classes.graph.hasMethod('neighbors')){
sigma.classes.graph.addMethod('neighbors', function(nodeId) {
var k,
neighbors = {},
index = this.allNeighborsIndex[nodeId] || {};
for (k in index)
neighbors[k] = this.nodesIndex[k];
return neighbors;
});
}
//adding the central node
g.nodes.push({
id: 20,
label: 'Developmental & Stem Cell Biology',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/06/research.pasteur.fr_stem-cells-150x150.jpg',
x: 0,
y: 0,
size: 30,
color: '#DDDDDD'
});
var x_node = Math.cos(2 * 0 * Math.PI / N) * 2;
var y_node = Math.sin(2 * 0 * Math.PI / N) * 2;
N=3
//check if content already exist
x_site = Math.cos(2 * 0 * Math.PI / N) * 2;
y_site = Math.sin(2 * 0 * Math.PI / N) * 2;
// adding site
g.nodes.push({
id: 8494,
label: 'Hélène Ribierre',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_ha4-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/helene-ribierre/',
x: x_site,
y: y_site,
size: 10,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 208494,
size: 0.5,
source: 20,
target: 8494 });
//check if content already exist
x_site = Math.cos(2 * 1 * Math.PI / N) * 2;
y_site = Math.sin(2 * 1 * Math.PI / N) * 2;
// adding site
g.nodes.push({
id: 4824,
label: 'François Schweisguth',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2017/05/research_pasteur-fs3-3-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/francois-schweisguth/',
x: x_site,
y: y_site,
size: 10,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 204824,
size: 0.5,
source: 20,
target: 4824 });
//check if content already exist
x_site = Math.cos(2 * 2 * Math.PI / N) * 2;
y_site = Math.sin(2 * 2 * Math.PI / N) * 2;
// adding site
g.nodes.push({
id: 64150,
label: 'Laure Bally-Cuif',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2016/04/research.pasteur.fr_laure_bally-cuiff-150x150.png',
page_url: 'https://research.pasteur.fr/en/member/laure-bally-cuif/',
x: x_site,
y: y_site,
size: 10,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 2064150,
size: 0.5,
source: 20,
target: 64150 });
N=16
// update positions
x_node = Math.cos(2 * 0 * Math.PI / N) * 10;
y_node = Math.sin(2 * 0 * Math.PI / N) * 10;
// adding node
var x_node = Math.cos(2 * 0 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 0 * Math.PI / N) * 10;
g.nodes.push({
id: 78781,
label: 'TEAM: Cell death and epithelial homeostasis',
x: x_node,
y: y_node,
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2017/01/research.pasteur.fr_bandeau-g5-r-levayer-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/team/cell-death-and-epithelial-homeostasis/',
size: 10,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 2078781,
size: 0.5,
source: 20,
target: 78781 });
//check if content already exist
if (x_node<0){
x_site = x_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
x_site = x_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
if (y_node<0){
y_site = y_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
y_site = y_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
// adding site
g.nodes.push({
id: 7785,
label: 'Florence Levillayer',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2017/05/research_pasteur-florence-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/florence-levillayer/',
x: x_site,
y: y_site,
size: 3,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 787817785,
size: 0.5,
source: 78781,
target: 7785 });
//check if content already exist
if (x_node<0){
x_site = x_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
x_site = x_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
if (y_node<0){
y_site = y_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
y_site = y_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
// adding site
g.nodes.push({
id: 90349,
label: 'Léo Valon',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2017/05/research_pasteur-leo-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/leo-valon/',
x: x_site,
y: y_site,
size: 3,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 7878190349,
size: 0.5,
source: 78781,
target: 90349 });
//check if content already exist
if (x_node<0){
x_site = x_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
x_site = x_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
if (y_node<0){
y_site = y_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
y_site = y_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
// adding site
g.nodes.push({
id: 78773,
label: 'Romain Levayer',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2016/11/research.pasteur.fr_dsc_0008-001-1-1-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/romain-levayer/',
x: x_site,
y: y_site,
size: 3,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 7878178773,
size: 0.5,
source: 78781,
target: 78773 });
// adding node
var x_node = Math.cos(2 * 1 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 1 * Math.PI / N) * 10;
g.nodes.push({
id: 64152,
label: 'TEAM: Zebrafish Neurogenetics',
x: x_node,
y: y_node,
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2016/02/research.pasteur.fr_zebrafish-neurogenetics-1-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/team/zebrafish-neurogenetics/',
size: 10,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 2064152,
size: 0.5,
source: 20,
target: 64152 });
//check if content already exist
if (x_node<0){
x_site = x_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
x_site = x_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
if (y_node<0){
y_site = y_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
y_site = y_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
// adding site
g.nodes.push({
id: 75892,
label: 'Alessandro Alunni',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2016/09/research.pasteur.fr_ale-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/alessandro-alunni/',
x: x_site,
y: y_site,
size: 3,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 6415275892,
size: 0.5,
source: 64152,
target: 75892 });
//check if content already exist
if (x_node<0){
x_site = x_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
x_site = x_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
if (y_node<0){
y_site = y_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
y_site = y_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
// adding site
g.nodes.push({
id: 75914,
label: 'Sébastien Bedu',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2016/09/research.pasteur.fr_p1000492-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/sebastien-bedu/',
x: x_site,
y: y_site,
size: 3,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 6415275914,
size: 0.5,
source: 64152,
target: 75914 });
//check if content already exist
if (x_node<0){
x_site = x_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
x_site = x_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
if (y_node<0){
y_site = y_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
y_site = y_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
// adding site
g.nodes.push({
id: 76188,
label: 'Nicolas Chanthapathet',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2016/09/research.pasteur.fr_kola2-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/nicolas-chanthapathet/',
x: x_site,
y: y_site,
size: 3,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 6415276188,
size: 0.5,
source: 64152,
target: 76188 });
//check if content already exist
if (x_node<0){
x_site = x_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
x_site = x_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
if (y_node<0){
y_site = y_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
y_site = y_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
// adding site
g.nodes.push({
id: 75812,
label: 'Marion Coolen',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2016/08/research.pasteur.fr_me-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/fr-marion-coolen/',
x: x_site,
y: y_site,
size: 3,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 6415275812,
size: 0.5,
source: 64152,
target: 75812 });
//check if content already exist
if (x_node<0){
x_site = x_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
x_site = x_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
if (y_node<0){
y_site = y_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
y_site = y_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
// adding site
g.nodes.push({
id: 75802,
label: 'Valentina Cuccioli',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2016/08/research.pasteur.fr_vale2-1-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/fr-valentina-cuccioli/',
x: x_site,
y: y_site,
size: 3,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 6415275802,
size: 0.5,
source: 64152,
target: 75802 });
//check if content already exist
if (x_node<0){
x_site = x_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
x_site = x_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
if (y_node<0){
y_site = y_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
y_site = y_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
// adding site
g.nodes.push({
id: 75885,
label: 'Delphine Cussigh',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2016/09/research.pasteur.fr_p1000480-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/delphine-cussigh/',
x: x_site,
y: y_site,
size: 3,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 6415275885,
size: 0.5,
source: 64152,
target: 75885 });
//check if content already exist
if (x_node<0){
x_site = x_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
x_site = x_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
if (y_node<0){
y_site = y_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
y_site = y_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
// adding site
g.nodes.push({
id: 75880,
label: 'Nicolas Dray',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2016/09/research.pasteur.fr_nico1-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/nicolas-dray/',
x: x_site,
y: y_site,
size: 3,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 6415275880,
size: 0.5,
source: 64152,
target: 75880 });
//check if content already exist
if (x_node<0){
x_site = x_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
x_site = x_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
if (y_node<0){
y_site = y_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
y_site = y_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
// adding site
g.nodes.push({
id: 76198,
label: 'Rosaria Esposito',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2016/09/research.pasteur.fr_rosaria-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/rosaria-esposito/',
x: x_site,
y: y_site,
size: 3,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 6415276198,
size: 0.5,
source: 64152,
target: 76198 });
//check if content already exist
if (x_node<0){
x_site = x_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
x_site = x_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
if (y_node<0){
y_site = y_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
y_site = y_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
// adding site
g.nodes.push({
id: 75907,
label: 'Isabelle Foucher',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2016/09/research.pasteur.fr_p1000478-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/isabelle-foucher/',
x: x_site,
y: y_site,
size: 3,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 6415275907,
size: 0.5,
source: 64152,
target: 75907 });
//check if content already exist
if (x_node<0){
x_site = x_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
x_site = x_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
if (y_node<0){
y_site = y_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
y_site = y_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
// adding site
g.nodes.push({
id: 35825,
label: 'Laure Mancini',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2016/09/research.pasteur.fr_laurette-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/laure-mancini/',
x: x_site,
y: y_site,
size: 3,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 6415235825,
size: 0.5,
source: 64152,
target: 35825 });
//check if content already exist
if (x_node<0){
x_site = x_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
x_site = x_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
if (y_node<0){
y_site = y_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
y_site = y_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
// adding site
g.nodes.push({
id: 75781,
label: 'Sara Ortica',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2016/09/research.pasteur.fr_dsc04469-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/sara-ortica/',
x: x_site,
y: y_site,
size: 3,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 6415275781,
size: 0.5,
source: 64152,
target: 75781 });
//check if content already exist
if (x_node<0){
x_site = x_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
x_site = x_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
if (y_node<0){
y_site = y_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
y_site = y_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
// adding site
g.nodes.push({
id: 76181,
label: 'Marie-Elise Schwartz',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2016/09/research.pasteur.fr_photo-me-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/marie-elise-schwartz/',
x: x_site,
y: y_site,
size: 3,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 6415276181,
size: 0.5,
source: 64152,
target: 76181 });
//check if content already exist
if (x_node<0){
x_site = x_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
x_site = x_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
if (y_node<0){
y_site = y_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
y_site = y_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
// adding site
g.nodes.push({
id: 75792,
label: 'Emmanuel Than-Trong',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2016/08/research.pasteur.fr_manu-2-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/emmanuel-than-trong/',
x: x_site,
y: y_site,
size: 3,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 6415275792,
size: 0.5,
source: 64152,
target: 75792 });
//check if content already exist
if (x_node<0){
x_site = x_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
x_site = x_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
if (y_node<0){
y_site = y_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
y_site = y_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
// adding site
g.nodes.push({
id: 7765,
label: 'Sylvie Laganier',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/member/sylvie-laganier/',
x: x_site,
y: y_site,
size: 3,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 641527765,
size: 0.5,
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y_site = y_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
y_site = y_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
// adding site
g.nodes.push({
id: 70511,
label: 'Zuzanna Andrzejewska',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2016/11/research.pasteur.fr_zuza-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/zuzanna-andrzejewska/',
x: x_site,
y: y_site,
size: 3,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 614270511,
size: 0.5,
source: 6142,
target: 70511 });
//check if content already exist
if (x_node<0){
x_site = x_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
x_site = x_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
if (y_node<0){
y_site = y_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
y_site = y_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
// adding site
g.nodes.push({
id: 78109,
label: 'Maria Benavente Diaz',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2016/11/research.pasteur.fr_maria-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/fr-maria-benavente-diaz/',
x: x_site,
y: y_site,
size: 3,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 614278109,
size: 0.5,
source: 6142,
target: 78109 });
//check if content already exist
if (x_node<0){
x_site = x_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
x_site = x_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
if (y_node<0){
y_site = y_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
y_site = y_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
// adding site
g.nodes.push({
id: 79698,
label: 'Alexandre Grimaldi',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2016/11/research.pasteur.fr_20161108_103115-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/fr-alexandre-grimaldi/',
x: x_site,
y: y_site,
size: 3,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 614279698,
size: 0.5,
source: 6142,
target: 79698 });
//check if content already exist
if (x_node<0){
x_site = x_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
x_site = x_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
if (y_node<0){
y_site = y_node + 0.01*(((Math.random() * 2)-1) - offset_left);
}else{
y_site = y_node + 0.01*(((Math.random() * 2)-1) + offset_left);
}
// adding site
g.nodes.push({
id: 4876,
label: 'Shahragim Tajbakhsh',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/06/research.pasteur.fr_shahragrim-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/shahragim-tajbakhsh/',
x: x_site,
y: y_site,
size: 3,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 61424876,
size: 0.5,
source: 6142,
target: 4876 });
var s = new sigma({
//container: document.getElementById('graph-main'),
graph: g,
renderer: {
// IMPORTANT:
// This works only with the canvas renderer, so the
// renderer type set as "canvas" is necessary here.
container: document.getElementById('graph-main'),
type: 'canvas'
},
settings: {
minNodeSize: 6,
maxNodeSize: 30,
mouseWheelEnabled: false,
font: 'Montserrat',
labelThreshold:25,
borderSize:1,
defaultNodeBorderColor: '#333',
sideMargin:25,
}
});
// We first need to save the original colors of our
// nodes and edges, like this:
s.graph.nodes().forEach(function(n) {
n.originalColor = n.color;
//console.log(n.id);
//console.log(s.graph.nodes(n.id));
});
s.graph.edges().forEach(function(e) {
e.originalColor = e.color;
});
// When a node is clicked, we check for each node
// if it is a neighbor of the clicked one. If not,
// we set its color as grey, and else, it takes its
// original color.
// We do the same for the edges, and we only keep
// edges that have both extremities colored.
s.bind('clickNode', function(e) {
var nodeId = e.data.node.id,
toKeep = s.graph.neighbors(nodeId);
toKeep[nodeId] = e.data.node;
s.graph.nodes().forEach(function(n) {
if (toKeep[n.id])
n.color = '#35a9f5';
else
n.color = '#dddddd';
});
s.graph.edges().forEach(function(e) {
if (toKeep[e.source] && toKeep[e.target])
e.color = '#35a9f5';
else
e.color = '#dddddd';
});
// Since the data has been modified, we need to
// call the refresh method to make the colors
// update effective.
s.refresh();
});
// When the stage is clicked, we just color each
// node and edge with its original color.
s.bind('clickStage', function(e) {
s.graph.nodes().forEach(function(n) {
n.color = n.originalColor;
});
s.graph.edges().forEach(function(e) {
e.color = e.originalColor;
});
// Same as in the previous event:
s.refresh();
});
s.bind("doubleClickNode", function (e) {
$("#canvas-wrap, .sigma-scene, .sigma-mouse").val();
ajax_load_page( e.data.node.page_url );
});
var c = s.camera;
s.bind("rightClickStage", function (e) {
sigma.misc.animation.camera(c, {
ratio: c.ratio * c.settings('zoomingRatio')
}, {
duration: 200
});
});
// Configure the noverlap layout:
var noverlapListener = s.configNoverlap({
nodeMargin: 5,
scaleNodes: 0.3,
gridSize: 1,
easing: 'quadraticInOut', // animation transition function
duration: 4000 // animation duration. Long here for the purposes of this example only
});
// Bind the events:
noverlapListener.bind('start stop interpolate', function(e) {
//console.log(e.type);
if(e.type === 'start') {
//console.time('noverlap');
}
if(e.type === 'interpolate') {
//console.timeEnd('noverlap');
}
});
// Start the layout:
s.startNoverlap();
//s.refresh();
// Initialize the dragNodes plugin:
var dragListener = sigma.plugins.dragNodes(s, s.renderers[0]);
dragListener.bind('startdrag', function(event) {
});
dragListener.bind('drag', function(event) {
});
dragListener.bind('drop', function(event) {
});
dragListener.bind('dragend', function(event) {
});