GUIDE
- Left-click and drag the background to move the graph
- Left-click and drag the nodes to reorganize
- Left-click a node to view first level connections
- Double left-click a node to navigate to its page
- Double left-click the background to zoom in
- Right-click the background to zoom out
sigma.utils.pkg('sigma.canvas.nodes');
sigma.canvas.nodes.image = (function() {
var _cache = {},
_loading = {},
_callbacks = {};
// Return the renderer itself:
var renderer = function(node, context, settings) {
var args = arguments,
prefix = settings('prefix') || '',
size = node[prefix + 'size'],
color = node.color || settings('defaultNodeColor'),
url = node.url;
if (_cache[url]) {
context.save();
// Draw the clipping disc:
context.beginPath();
context.arc(
node[prefix + 'x'],
node[prefix + 'y'],
node[prefix + 'size'],
0,
Math.PI * 2,
true
);
context.closePath();
context.clip();
// Draw the image
context.drawImage(
_cache[url],
node[prefix + 'x'] - size,
node[prefix + 'y'] - size,
2 * size,
2 * size
);
// Quit the "clipping mode":
context.restore();
// Draw the border:
context.beginPath();
context.arc(
node[prefix + 'x'],
node[prefix + 'y'],
node[prefix + 'size'],
0,
Math.PI * 2,
true
);
context.lineWidth = 1;
context.strokeStyle = node.color || settings('defaultNodeColor');
context.stroke();
} else {
sigma.canvas.nodes.image.cache(url);
sigma.canvas.nodes.def.apply(
sigma.canvas.nodes,
args
);
}
};
// Let's add a public method to cache images, to make it possible to
// preload images before the initial rendering:
renderer.cache = function(url, callback) {
if (callback)
_callbacks[url] = callback;
if (_loading[url])
return;
var img = new Image();
img.onload = function() {
_loading[url] = false;
_cache[url] = img;
if (_callbacks[url]) {
_callbacks[url].call(this, img);
delete _callbacks[url];
}
};
_loading[url] = true;
img.src = url;
};
return renderer;
})();
var i,
s,
o,
offset_left = 0.5,
N = 1,
E = 40,
C = 5,
d = 0.5,
cs = [],
g = {
nodes: [],
edges: []
};
if (!sigma.classes.graph.hasMethod('neighbors')){
sigma.classes.graph.addMethod('neighbors', function(nodeId) {
var k,
neighbors = {},
index = this.allNeighborsIndex[nodeId] || {};
for (k in index)
neighbors[k] = this.nodesIndex[k];
return neighbors;
});
}
//adding the central node
g.nodes.push({
id: 166217,
label: 'Center for Vaccinology and Immunotherapy (CVI)',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2021/10/research_pasteur-encenter-for-vaccinology-and-immunotherapy-cvifrcentre-de-vaccinologie-et-dimmunotherapie-cvi-00004139-150x150.jpg',
x: 0,
y: 0,
size: 30,
color: '#DDDDDD'
});
var x_node = Math.cos(2 * 0 * Math.PI / N) * 2;
var y_node = Math.sin(2 * 0 * Math.PI / N) * 2;
N=4
//check if content already exist
x_site = Math.cos(2 * 0 * Math.PI / N) * 2;
y_site = Math.sin(2 * 0 * Math.PI / N) * 2;
// adding site
g.nodes.push({
id: 210524,
label: 'Sandra Bobichon',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2023/10/research_pasteur-sandra-bobichon-id-sb-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/sandra-bobichon/',
x: x_site,
y: y_site,
size: 10,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 166217210524,
size: 0.5,
source: 166217,
target: 210524 });
//check if content already exist
x_site = Math.cos(2 * 1 * Math.PI / N) * 2;
y_site = Math.sin(2 * 1 * Math.PI / N) * 2;
// adding site
g.nodes.push({
id: 239560,
label: 'Mahshad Mehrin',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/member/mahshad-mehrin/',
x: x_site,
y: y_site,
size: 10,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 166217239560,
size: 0.5,
source: 166217,
target: 239560 });
//check if content already exist
x_site = Math.cos(2 * 2 * Math.PI / N) * 2;
y_site = Math.sin(2 * 2 * Math.PI / N) * 2;
// adding site
g.nodes.push({
id: 4180,
label: 'James Di Santo',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2016/05/research.pasteur.fr_photojd-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/james-di-santo/',
x: x_site,
y: y_site,
size: 10,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 1662174180,
size: 0.5,
source: 166217,
target: 4180 });
//check if content already exist
x_site = Math.cos(2 * 3 * Math.PI / N) * 2;
y_site = Math.sin(2 * 3 * Math.PI / N) * 2;
// adding site
g.nodes.push({
id: 4184,
label: 'Guillemette Masse-Ranson',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/05/research_pasteur-enguillemette-masse-ranson-frguillemette-masse-ranson-pxl-20240827-130246643-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/guillemette-masse-ranson/',
x: x_site,
y: y_site,
size: 10,
color: '#DDDDDD'
});
//link to content
g.edges.push({
id: 1662174184,
size: 0.5,
source: 166217,
target: 4184 });
N=33
// update positions
x_node = Math.cos(2 * 0 * Math.PI / N) * 10;
y_node = Math.sin(2 * 0 * Math.PI / N) * 10;
// adding node
var x_node = Math.cos(2 * 0 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 0 * Math.PI / N) * 10;
g.nodes.push({
id: 199398,
label: 'TEAM: Dendritic cells and adaptive immunity',
x: x_node,
y: y_node,
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2023/03/research_pasteur-endendritic-cells-and-adaptive-immunityfrcellules-dendritiques-et-immunite-adaptative-institutpasteur-46120-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/team/dendritic-cells-and-adaptive-immunity/',
size: 10,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 166217199398,
size: 0.5,
source: 166217,
target: 199398 });
// adding node
var x_node = Math.cos(2 * 1 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 1 * Math.PI / N) * 10;
g.nodes.push({
id: 196110,
label: 'TEAM: FlavImmunity',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/team/flavimmunity/',
size: 10,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 166217196110,
size: 0.5,
source: 166217,
target: 196110 });
// adding node
var x_node = Math.cos(2 * 2 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 2 * Math.PI / N) * 10;
g.nodes.push({
id: 170297,
label: 'TEAM: Human Disease Models core facility',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/team/human-disease-models-core-facility/',
size: 10,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 166217170297,
size: 0.5,
source: 166217,
target: 170297 });
// adding node
var x_node = Math.cos(2 * 3 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 3 * Math.PI / N) * 10;
g.nodes.push({
id: 141830,
label: 'TEAM: Group : Milieu Intérieur',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/team/group-milieu-interieur/',
size: 10,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 166217141830,
size: 0.5,
source: 166217,
target: 141830 });
// adding node
var x_node = Math.cos(2 * 4 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 4 * Math.PI / N) * 10;
g.nodes.push({
id: 139045,
label: 'TEAM: Plasmodium Infection and Transmission',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/team/biology-of-plasmodium-infection-and-transmission/',
size: 10,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 166217139045,
size: 0.5,
source: 166217,
target: 139045 });
// adding node
var x_node = Math.cos(2 * 5 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 5 * Math.PI / N) * 10;
g.nodes.push({
id: 101904,
label: 'TEAM: Evolutionary genomics of RNA viruses',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/team/evolutionary-genomics-rna-viruses/',
size: 10,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 166217101904,
size: 0.5,
source: 166217,
target: 101904 });
// adding node
var x_node = Math.cos(2 * 6 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 6 * Math.PI / N) * 10;
g.nodes.push({
id: 90653,
label: 'TEAM: Mouse Genetics, Immunity and Infections',
x: x_node,
y: y_node,
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2017/05/research_pasteur-enmouse-geneticsfrgenetique-de-la-souris-illustration-mouse-genetics-v2-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/team/mouse-genetics-immunity-and-infections/',
size: 10,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 16621790653,
size: 0.5,
source: 166217,
target: 90653 });
// adding node
var x_node = Math.cos(2 * 7 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 7 * Math.PI / N) * 10;
g.nodes.push({
id: 65444,
label: 'TEAM: Virus sensing and signaling',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/team/virus-sensing-and-signaling/',
size: 10,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 16621765444,
size: 0.5,
source: 166217,
target: 65444 });
// adding node
var x_node = Math.cos(2 * 8 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 8 * Math.PI / N) * 10;
g.nodes.push({
id: 26170,
label: 'TEAM: Clinical Research Coordination Office',
x: x_node,
y: y_node,
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/09/research.pasteur.fr_institutpasteur_36110-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/team/clinical-core/',
size: 10,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 16621726170,
size: 0.5,
source: 166217,
target: 26170 });
// adding node
var x_node = Math.cos(2 * 9 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 9 * Math.PI / N) * 10;
g.nodes.push({
id: 24119,
label: 'TEAM: Malaria Infection & Immunity',
x: x_node,
y: y_node,
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/05/research.pasteur.fr_malaria-biology-and-genetics-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/team/malaria-infection-immunity/',
size: 10,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 16621724119,
size: 0.5,
source: 166217,
target: 24119 });
// adding node
var x_node = Math.cos(2 * 10 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 10 * Math.PI / N) * 10;
g.nodes.push({
id: 18489,
label: 'TEAM: Bioinformatics and Biostatistics HUB',
x: x_node,
y: y_node,
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/06/research.pasteur.fr_complex-system-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/team/bioinformatics-and-biostatistics-hub/',
size: 10,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 16621718489,
size: 0.5,
source: 166217,
target: 18489 });
// adding node
var x_node = Math.cos(2 * 11 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 11 * Math.PI / N) * 10;
g.nodes.push({
id: 6122,
label: 'TEAM: Immunology of Fungal Infections',
x: x_node,
y: y_node,
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/05/research_pasteur-enimmunology-of-fungal-infectionsfrimmunologie-des-infections-fongiques-research-pasteur-enimmunology-of-fungal-infectionsfrimmunologie-des-infections-fongiques-sd-cnr-ai-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/team/immunology-of-fungal-infections/',
size: 10,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 1662176122,
size: 0.5,
source: 166217,
target: 6122 });
// adding node
var x_node = Math.cos(2 * 12 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 12 * Math.PI / N) * 10;
g.nodes.push({
id: 6134,
label: 'TEAM: Dynamics of Host-Pathogen Interactions',
x: x_node,
y: y_node,
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/06/research.pasteur.fr_453295a-f1.2-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/team/dynamics-of-host-pathogen-interactions/',
size: 10,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 1662176134,
size: 0.5,
source: 166217,
target: 6134 });
// adding node
var x_node = Math.cos(2 * 13 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 13 * Math.PI / N) * 10;
g.nodes.push({
id: 6152,
label: 'TEAM: Chemistry of Biomolecules',
x: x_node,
y: y_node,
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_institutpasteur_383851-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/team/chemistry-of-biomolecules/',
size: 10,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 1662176152,
size: 0.5,
source: 166217,
target: 6152 });
// adding node
var x_node = Math.cos(2 * 14 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 14 * Math.PI / N) * 10;
g.nodes.push({
id: 6149,
label: 'TEAM: Biochemistry of Macromolecular Interactions',
x: x_node,
y: y_node,
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_institutpasteur_i05999-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/team/biochemistry-of-macromolecular-interactions/',
size: 10,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 1662176149,
size: 0.5,
source: 166217,
target: 6149 });
// adding node
var x_node = Math.cos(2 * 15 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 15 * Math.PI / N) * 10;
g.nodes.push({
id: 6163,
label: 'TEAM: Integrated Mycobacterial Pathogenomics',
x: x_node,
y: y_node,
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/06/research.pasteur.fr_tuberculosis2-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/team/integrated-mycobacterial-pathogenomics/',
size: 10,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 1662176163,
size: 0.5,
source: 166217,
target: 6163 });
// adding node
var x_node = Math.cos(2 * 16 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 16 * Math.PI / N) * 10;
g.nodes.push({
id: 6166,
label: 'TEAM: Ecology and Emergence of Arthropod-borne Pathogens',
x: x_node,
y: y_node,
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/06/research.pasteur.fr_malaria-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/team/ecology-and-emergence-of-arthropod-borne-pathogens/',
size: 10,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 1662176166,
size: 0.5,
source: 166217,
target: 6166 });
// adding node
var x_node = Math.cos(2 * 17 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 17 * Math.PI / N) * 10;
g.nodes.push({
id: 6169,
label: 'TEAM: Innate Immunity',
x: x_node,
y: y_node,
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/06/research.pasteur.fr_hepvir-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/team/innate-immunity/',
size: 10,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 1662176169,
size: 0.5,
source: 166217,
target: 6169 });
// adding node
var x_node = Math.cos(2 * 18 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 18 * Math.PI / N) * 10;
g.nodes.push({
id: 6171,
label: 'TEAM: Microenvironment and Immunity',
x: x_node,
y: y_node,
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_hiv-infected-h9-t-cell-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/team/microenvironment-and-immunity/',
size: 10,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 1662176171,
size: 0.5,
source: 166217,
target: 6171 });
// adding node
var x_node = Math.cos(2 * 19 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 19 * Math.PI / N) * 10;
g.nodes.push({
id: 6172,
label: 'TEAM: Dynamics of Immune Responses',
x: x_node,
y: y_node,
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/05/research.pasteur.fr_dynamics-of-immune-responses4-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/team/dynamics-of-immune-responses/',
size: 10,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 1662176172,
size: 0.5,
source: 166217,
target: 6172 });
// adding node
var x_node = Math.cos(2 * 20 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 20 * Math.PI / N) * 10;
g.nodes.push({
id: 6177,
label: 'TEAM: Immunobiology and Therapy',
x: x_node,
y: y_node,
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/05/research_pasteur-enimmunobiology-and-therapyfrimmunobiologie-et-therapie-institutpasteur-i04790-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/team/immunobiology-and-therapy/',
size: 10,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 1662176177,
size: 0.5,
source: 166217,
target: 6177 });
// adding node
var x_node = Math.cos(2 * 21 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 21 * Math.PI / N) * 10;
g.nodes.push({
id: 6174,
label: 'TEAM: Immunoregulation',
x: x_node,
y: y_node,
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/05/research.pasteur.fr_immunoregulation-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/team/immunoregulation/',
size: 10,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 1662176174,
size: 0.5,
source: 166217,
target: 6174 });
// adding node
var x_node = Math.cos(2 * 22 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 22 * Math.PI / N) * 10;
g.nodes.push({
id: 6178,
label: 'TEAM: Antibodies in Therapy and Pathology',
x: x_node,
y: y_node,
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/05/research.pasteur.fr_antibodies-in-therapy-and-pathology-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/team/antibodies-in-therapy-and-pathology/',
size: 10,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 1662176178,
size: 0.5,
source: 166217,
target: 6178 });
// adding node
var x_node = Math.cos(2 * 23 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 23 * Math.PI / N) * 10;
g.nodes.push({
id: 6184,
label: 'TEAM: Invasive Bacterial Infections',
x: x_node,
y: y_node,
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/05/research.pasteur.fr_invasive-bacterial-infections-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/team/invasive-bacterial-infections/',
size: 10,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 1662176184,
size: 0.5,
source: 166217,
target: 6184 });
// adding node
var x_node = Math.cos(2 * 24 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 24 * Math.PI / N) * 10;
g.nodes.push({
id: 6190,
label: 'TEAM: Biology and Genetics of Bacterial Cell Wall',
x: x_node,
y: y_node,
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/05/research.pasteur.fr_biology-and-genetics-of-bacterial-cell-wall-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/team/biology-and-genetics-of-bacterial-cell-wall/',
size: 10,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 1662176190,
size: 0.5,
source: 166217,
target: 6190 });
// adding node
var x_node = Math.cos(2 * 25 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 25 * Math.PI / N) * 10;
g.nodes.push({
id: 6195,
label: 'TEAM: Yersinia',
x: x_node,
y: y_node,
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/05/research.pasteur.fr_yersinia-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/team/yersinia/',
size: 10,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 1662176195,
size: 0.5,
source: 166217,
target: 6195 });
// adding node
var x_node = Math.cos(2 * 26 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 26 * Math.PI / N) * 10;
g.nodes.push({
id: 6210,
label: 'TEAM: Malaria Parasite Biology and Vaccines',
x: x_node,
y: y_node,
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/05/research.pasteur.fr_malaria-parasite-biology-and-vaccines-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/team/malaria-parasite-biology-and-vaccines/',
size: 10,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 1662176210,
size: 0.5,
source: 166217,
target: 6210 });
// adding node
var x_node = Math.cos(2 * 27 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 27 * Math.PI / N) * 10;
g.nodes.push({
id: 6211,
label: 'TEAM: Biology of Viral Emerging Infections',
x: x_node,
y: y_node,
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_institutpasteur_i04690-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/team/biology-of-viral-emerging-infections/',
size: 10,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 1662176211,
size: 0.5,
source: 166217,
target: 6211 });
// adding node
var x_node = Math.cos(2 * 28 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 28 * Math.PI / N) * 10;
g.nodes.push({
id: 6223,
label: 'TEAM: Structural Virology',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/team/structural-virology/',
size: 10,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 1662176223,
size: 0.5,
source: 166217,
target: 6223 });
// adding node
var x_node = Math.cos(2 * 29 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 29 * Math.PI / N) * 10;
g.nodes.push({
id: 6224,
label: 'TEAM: Virus and Immunity',
x: x_node,
y: y_node,
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_institutpasteur_40763-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/team/virus-and-immunity/',
size: 10,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 1662176224,
size: 0.5,
source: 166217,
target: 6224 });
// adding node
var x_node = Math.cos(2 * 30 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 30 * Math.PI / N) * 10;
g.nodes.push({
id: 6226,
label: 'TEAM: HIV, Inflammation and Viral Persistences',
x: x_node,
y: y_node,
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/09/research.pasteur.fr_duo-1-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/team/hiv-inflammation-and-persistence/',
size: 10,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 1662176226,
size: 0.5,
source: 166217,
target: 6226 });
// adding node
var x_node = Math.cos(2 * 31 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 31 * Math.PI / N) * 10;
g.nodes.push({
id: 6228,
label: 'TEAM: Environment and Infectious Risks',
x: x_node,
y: y_node,
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_institutpasteur_i03450-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/team/environment-and-infectious-risks/',
size: 10,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 1662176228,
size: 0.5,
source: 166217,
target: 6228 });
// adding node
var x_node = Math.cos(2 * 32 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 32 * Math.PI / N) * 10;
g.nodes.push({
id: 1072,
label: 'TEAM: Proteomics',
x: x_node,
y: y_node,
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/02/P53-Protein-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/team/proteomics/',
size: 10,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 1662171072,
size: 0.5,
source: 166217,
target: 1072 });
var s = new sigma({
//container: document.getElementById('graph-main'),
graph: g,
renderer: {
// IMPORTANT:
// This works only with the canvas renderer, so the
// renderer type set as "canvas" is necessary here.
container: document.getElementById('graph-main'),
type: 'canvas'
},
settings: {
minNodeSize: 6,
maxNodeSize: 30,
mouseWheelEnabled: false,
font: 'Montserrat',
labelThreshold:25,
borderSize:1,
defaultNodeBorderColor: '#333',
sideMargin:25,
}
});
// We first need to save the original colors of our
// nodes and edges, like this:
s.graph.nodes().forEach(function(n) {
n.originalColor = n.color;
//console.log(n.id);
//console.log(s.graph.nodes(n.id));
});
s.graph.edges().forEach(function(e) {
e.originalColor = e.color;
});
// When a node is clicked, we check for each node
// if it is a neighbor of the clicked one. If not,
// we set its color as grey, and else, it takes its
// original color.
// We do the same for the edges, and we only keep
// edges that have both extremities colored.
s.bind('clickNode', function(e) {
var nodeId = e.data.node.id,
toKeep = s.graph.neighbors(nodeId);
toKeep[nodeId] = e.data.node;
s.graph.nodes().forEach(function(n) {
if (toKeep[n.id])
n.color = '#35a9f5';
else
n.color = '#dddddd';
});
s.graph.edges().forEach(function(e) {
if (toKeep[e.source] && toKeep[e.target])
e.color = '#35a9f5';
else
e.color = '#dddddd';
});
// Since the data has been modified, we need to
// call the refresh method to make the colors
// update effective.
s.refresh();
});
// When the stage is clicked, we just color each
// node and edge with its original color.
s.bind('clickStage', function(e) {
s.graph.nodes().forEach(function(n) {
n.color = n.originalColor;
});
s.graph.edges().forEach(function(e) {
e.color = e.originalColor;
});
// Same as in the previous event:
s.refresh();
});
s.bind("doubleClickNode", function (e) {
$("#canvas-wrap, .sigma-scene, .sigma-mouse").val();
ajax_load_page( e.data.node.page_url );
});
var c = s.camera;
s.bind("rightClickStage", function (e) {
sigma.misc.animation.camera(c, {
ratio: c.ratio * c.settings('zoomingRatio')
}, {
duration: 200
});
});
// Configure the noverlap layout:
var noverlapListener = s.configNoverlap({
nodeMargin: 5,
scaleNodes: 0.3,
gridSize: 1,
easing: 'quadraticInOut', // animation transition function
duration: 4000 // animation duration. Long here for the purposes of this example only
});
// Bind the events:
noverlapListener.bind('start stop interpolate', function(e) {
//console.log(e.type);
if(e.type === 'start') {
//console.time('noverlap');
}
if(e.type === 'interpolate') {
//console.timeEnd('noverlap');
}
});
// Start the layout:
s.startNoverlap();
//s.refresh();
// Initialize the dragNodes plugin:
var dragListener = sigma.plugins.dragNodes(s, s.renderers[0]);
dragListener.bind('startdrag', function(event) {
});
dragListener.bind('drag', function(event) {
});
dragListener.bind('drop', function(event) {
});
dragListener.bind('dragend', function(event) {
});