GUIDE
- Left-click and drag the background to move the graph
- Left-click and drag the nodes to reorganize
- Left-click a node to view first level connections
- Double left-click a node to navigate to its page
- Double left-click the background to zoom in
- Right-click the background to zoom out
sigma.utils.pkg('sigma.canvas.nodes');
sigma.canvas.nodes.image = (function() {
var _cache = {},
_loading = {},
_callbacks = {};
// Return the renderer itself:
var renderer = function(node, context, settings) {
var args = arguments,
prefix = settings('prefix') || '',
size = node[prefix + 'size'],
color = node.color || settings('defaultNodeColor'),
url = node.url;
if (_cache[url]) {
context.save();
// Draw the clipping disc:
context.beginPath();
context.arc(
node[prefix + 'x'],
node[prefix + 'y'],
node[prefix + 'size'],
0,
Math.PI * 2,
true
);
context.closePath();
context.clip();
// Draw the image
context.drawImage(
_cache[url],
node[prefix + 'x'] - size,
node[prefix + 'y'] - size,
2 * size,
2 * size
);
// Quit the "clipping mode":
context.restore();
// Draw the border:
context.beginPath();
context.arc(
node[prefix + 'x'],
node[prefix + 'y'],
node[prefix + 'size'],
0,
Math.PI * 2,
true
);
context.lineWidth = 1;
context.strokeStyle = node.color || settings('defaultNodeColor');
context.stroke();
} else {
sigma.canvas.nodes.image.cache(url);
sigma.canvas.nodes.def.apply(
sigma.canvas.nodes,
args
);
}
};
// Let's add a public method to cache images, to make it possible to
// preload images before the initial rendering:
renderer.cache = function(url, callback) {
if (callback)
_callbacks[url] = callback;
if (_loading[url])
return;
var img = new Image();
img.onload = function() {
_loading[url] = false;
_cache[url] = img;
if (_callbacks[url]) {
_callbacks[url].call(this, img);
delete _callbacks[url];
}
};
_loading[url] = true;
img.src = url;
};
return renderer;
})();
var i,
s,
o,
offset_left = 0.5,
N = 1,
E = 40,
C = 5,
d = 0.5,
cs = [],
g = {
nodes: [],
edges: []
};
if (!sigma.classes.graph.hasMethod('neighbors')){
sigma.classes.graph.addMethod('neighbors', function(nodeId) {
var k,
neighbors = {},
index = this.allNeighborsIndex[nodeId] || {};
for (k in index)
neighbors[k] = this.nodesIndex[k];
return neighbors;
});
}
//adding the central node
g.nodes.push({
id: 137237,
label: 'Emmanuelle Permal',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2020/02/research_pasteur-pasteur2-150x150.jpg',
x: 0,
y: 0,
size: 30,
color: '#DDDDDD'
});
var biggest_node_size = 0;
N=8
// adding node
var x_node = Math.cos(2 * 0 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 0 * Math.PI / N) * 10;
g.nodes.push({
id: 228771,
label: 'COURSE: Bioinformatics program for PhD students 2024 2025',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/course/bioinformatics-program-for-phd-students/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 137237228771,
size: 0.5,
source: 137237,
target: 228771,
});
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 84017,
label: 'Emeline Perthame',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2017/02/research_pasteur-emeline-perthame-2022-01-13-14.37.20-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/emeline-perthame/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 22877184017,
size: 0.5,
source: 228771,
target: 84017 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 180302,
label: 'Marvin Albert',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2022/05/research_pasteur-marvin-albert-photo-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/marvin-albert/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 228771180302,
size: 0.5,
source: 228771,
target: 180302 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 137237) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 228771137237,
size: 0.5,
source: 228771,
target: 137237 });
// adding node
var x_node = Math.cos(2 * 1 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 1 * Math.PI / N) * 10;
g.nodes.push({
id: 205125,
label: 'COURSE: Bioinformatics program for PhD students 2023 2024',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/course/bioinformatics-program-for-phd-students-2023-2024/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 137237205125,
size: 0.5,
source: 137237,
target: 205125,
});
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 84017) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 20512584017,
size: 0.5,
source: 205125,
target: 84017 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 137237) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 205125137237,
size: 0.5,
source: 205125,
target: 137237 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 180302) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 205125180302,
size: 0.5,
source: 205125,
target: 180302 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 1581,
label: 'Jean-Yves Tinevez',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/02/JYT-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/jean-yves-tinevez/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 2051251581,
size: 0.5,
source: 205125,
target: 1581 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 152507,
label: 'Victoire Baillet',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2021/01/research_pasteur-victoire-baillet-foo2-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/victoire-baillet/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 205125152507,
size: 0.5,
source: 205125,
target: 152507 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 80005,
label: 'Thomas Bigot',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2016/11/research_pasteur-thomas-bigot-pour-profil2-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/thomas-bigot/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 20512580005,
size: 0.5,
source: 205125,
target: 80005 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 104981,
label: 'Pascal Campagne',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2018/07/research_pasteur-img_0911-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/pascal-campagne/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 205125104981,
size: 0.5,
source: 205125,
target: 104981 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 188699,
label: 'Elodie Chapeaublanc',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2022/10/research_pasteur-elodie-chapeaublanc-elodie-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/elodie-chapeaublanc/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 205125188699,
size: 0.5,
source: 205125,
target: 188699 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 57919,
label: 'Claudia Chica',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2018/09/research_pasteur-img_1035-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/claudia-chica/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 20512557919,
size: 0.5,
source: 205125,
target: 57919 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 104989,
label: 'Anđela Davidović',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2018/03/research_pasteur-692293-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/andela-davidovic/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 205125104989,
size: 0.5,
source: 205125,
target: 104989 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 187931,
label: 'Stephan Fischer',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/member/stephan-fischer/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 205125187931,
size: 0.5,
source: 205125,
target: 187931 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 37658,
label: 'Amine Ghozlane',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2020/06/research_pasteur-20200223_122542-1-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/amine-ghozlane/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 20512537658,
size: 0.5,
source: 205125,
target: 37658 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 37634,
label: 'Julien Guglielmini',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/09/research_pasteur-julien-guglielmini-last-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/julien-guglielmini/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 20512537634,
size: 0.5,
source: 205125,
target: 37634 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 80011,
label: 'Vincent Guillemot',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2016/11/research.pasteur.fr_vincent-guillemot-1-e1479989507346-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/vincent-guillemot/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 20512580011,
size: 0.5,
source: 205125,
target: 80011 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 152937,
label: 'Elise Jacquemet',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2021/01/research_pasteur-elise-jacquemet-elisej-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/elise-jacquemet/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 205125152937,
size: 0.5,
source: 205125,
target: 152937 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 912,
label: 'Bernd Jagla',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/02/research_pasteur-bernd-jagla-jagla-bernd-9029-scaled-e1619704164657-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/bernd-jagla/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 205125912,
size: 0.5,
source: 205125,
target: 912 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 101010,
label: 'Hanna Julienne',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2018/01/research_pasteur-hanna-julienne-microsoftteams-image-7-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/hanna-julienne/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 205125101010,
size: 0.5,
source: 205125,
target: 101010 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 176108,
label: 'Julia Kende',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2022/02/research_pasteur-julia-kende-photo-150x150.png',
page_url: 'https://research.pasteur.fr/en/member/julia-kende/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 205125176108,
size: 0.5,
source: 205125,
target: 176108 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 90271,
label: 'Vincent Laville',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2017/09/research_pasteur-lrvj9q4o-iju_h66kmj1skabjcq-1-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/vincent-laville/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 20512590271,
size: 0.5,
source: 205125,
target: 90271 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 57758,
label: 'Frédéric Lemoine',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/11/research_pasteur-frederic-lemoine-lemoine-frederic-26-small-crop-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/frederic-lemoine/',
x: x_site,
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url: 'https://research.pasteur.fr/wp-content/uploads/2018/06/research_pasteur-fumey-julien-10-e1528383655738-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/julien-fumey/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
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target: 101501 });
//check if content already exist
// update node size depending on the amount of edges
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//link to content
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//check if content already exist
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x_site = x_node + ((Math.random() * 2)-1) - offset_left;
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y_site = y_node + ((Math.random() * 2)-1) + offset_left;
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// adding site
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label: 'Quentin Giai Gianetto',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2016/11/research.pasteur.fr_p10001292_3-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/quentin-giai-gianetto/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
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//link to content
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//check if content already exist
// update node size depending on the amount of edges
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//link to content
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//check if content already exist
// update node size depending on the amount of edges
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//link to content
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target: 80011 });
//check if content already exist
// update node size depending on the amount of edges
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//link to content
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//check if content already exist
// update node size depending on the amount of edges
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//link to content
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//check if content already exist
// update node size depending on the amount of edges
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//link to content
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//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
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// adding site
g.nodes.push({
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label: 'Joseph Josephides',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2024/01/research_pasteur-enjoseph-josephidesfrjoseph-josephides-joseph-150x150.jpeg',
page_url: 'https://research.pasteur.fr/en/member/joseph-josephides/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
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//link to content
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//check if content already exist
// update node size depending on the amount of edges
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//link to content
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//check if content already exist
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y_site = y_node + ((Math.random() * 2)-1) + offset_left;
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// adding site
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label: 'Etienne Kornobis',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2017/06/research_pasteur-ekornobis-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/etienne-kornobis/',
x: x_site,
y: y_site,
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color: '#dddddd'
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//link to content
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//check if content already exist
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x_site = x_node + ((Math.random() * 2)-1) - offset_left;
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// adding site
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label: 'François Laurent',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2016/11/research_pasteur-francois-laurent-moi-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/francois-laurent/',
x: x_site,
y: y_site,
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color: '#dddddd'
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//link to content
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//check if content already exist
// update node size depending on the amount of edges
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//link to content
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//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
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y_site = y_node + ((Math.random() * 2)-1) + offset_left;
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// adding site
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label: 'Pierre Lechat',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_fig37-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/pierre-lechat/',
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color: '#dddddd'
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//link to content
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//check if content already exist
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y_site = y_node + ((Math.random() * 2)-1) + offset_left;
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// adding site
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label: 'Rachel Legendre',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/11/research_pasteur-rachel-legendre-img-20201028-145758-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/rachel-legendre/',
x: x_site,
y: y_site,
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color: '#dddddd'
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//link to content
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//check if content already exist
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// adding site
g.nodes.push({
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label: 'Nathalie Lehmann',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2023/10/research_pasteur-ennathalie-lehmannfrnathalie-lehmann-nathalie-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/nathalie-lehmann/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
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//link to content
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//check if content already exist
// update node size depending on the amount of edges
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//link to content
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//check if content already exist
// update node size depending on the amount of edges
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//link to content
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//check if content already exist
// update node size depending on the amount of edges
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//link to content
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//check if content already exist
// update node size depending on the amount of edges
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n.size = n.size + 8;
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//link to content
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//check if content already exist
// update node size depending on the amount of edges
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//link to content
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target: 154492 });
//check if content already exist
// update node size depending on the amount of edges
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n.size = n.size + 8;
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//link to content
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//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
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if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
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// adding site
g.nodes.push({
id: 4405,
label: 'Simon Malesys',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2018/02/research_pasteur-pasteur-profile-1-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/simon-malesys/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
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//link to content
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target: 4405 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
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x_site = x_node + ((Math.random() * 2)-1) + offset_left;
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y_site = y_node + ((Math.random() * 2)-1) - offset_left;
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y_site = y_node + ((Math.random() * 2)-1) + offset_left;
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// adding site
g.nodes.push({
id: 6830,
label: 'Fabien Mareuil',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/09/research.pasteur.fr_imag0560_1_2-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/fabien-mareuil/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
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source: 18489,
target: 6830 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 6822) {
n.size = n.size + 8;
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//link to content
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source: 18489,
target: 6822 });
//check if content already exist
// update node size depending on the amount of edges
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n.size = n.size + 8;
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//link to content
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source: 18489,
target: 79704 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
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x_site = x_node + ((Math.random() * 2)-1) + offset_left;
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if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
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y_site = y_node + ((Math.random() * 2)-1) + offset_left;
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// adding site
g.nodes.push({
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label: 'Hervé Menager',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/10/research.pasteur.fr_face-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/herve-menager/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
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//link to content
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target: 6820 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
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x_site = x_node + ((Math.random() * 2)-1) + offset_left;
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if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
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// adding site
g.nodes.push({
id: 210021,
label: 'Arnaud MENG',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2023/10/research_pasteur-enarnaud-mengfrarnaud-meng-arnaud-meng-1-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/arnaud-meng/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
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//link to content
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target: 210021 });
//check if content already exist
// update node size depending on the amount of edges
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n.size = n.size + 8;
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});
//link to content
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target: 188697 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
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n.size = n.size + 8;
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//link to content
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source: 18489,
target: 79863 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 153773) {
n.size = n.size + 8;
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//link to content
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target: 153773 });
//check if content already exist
// update node size depending on the amount of edges
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n.size = n.size + 8;
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//link to content
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//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
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x_site = x_node + ((Math.random() * 2)-1) + offset_left;
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y_site = y_node + ((Math.random() * 2)-1) - offset_left;
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y_site = y_node + ((Math.random() * 2)-1) + offset_left;
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// adding site
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label: 'Bertrand Néron',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/12/research.pasteur.fr_avatar-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/bertrand-neron/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
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//link to content
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//check if content already exist
// update node size depending on the amount of edges
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});
//link to content
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//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
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x_site = x_node + ((Math.random() * 2)-1) + offset_left;
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if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
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y_site = y_node + ((Math.random() * 2)-1) + offset_left;
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// adding site
g.nodes.push({
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label: 'Rania Ouazahrou',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/member/rania-ouazahrou/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
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//link to content
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target: 204626 });
//check if content already exist
// update node size depending on the amount of edges
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//link to content
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target: 4943 });
//check if content already exist
// update node size depending on the amount of edges
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//link to content
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//check if content already exist
if (x_node<0){
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x_site = x_node + ((Math.random() * 2)-1) + offset_left;
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y_site = y_node + ((Math.random() * 2)-1) - offset_left;
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y_site = y_node + ((Math.random() * 2)-1) + offset_left;
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// adding site
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label: 'Amandine Perrin',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/10/research.pasteur.fr_untitled4-142x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/amandine-perrin/',
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y: y_site,
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//link to content
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//check if content already exist
// update node size depending on the amount of edges
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//link to content
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//check if content already exist
// update node size depending on the amount of edges
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//link to content
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//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
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x_site = x_node + ((Math.random() * 2)-1) + offset_left;
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if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
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y_site = y_node + ((Math.random() * 2)-1) + offset_left;
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// adding site
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label: 'Rémi Planel',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2019/10/research_pasteur-photos_pasteur-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/remi-planel/',
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y: y_site,
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color: '#dddddd'
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//link to content
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//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
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x_site = x_node + ((Math.random() * 2)-1) + offset_left;
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if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
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y_site = y_node + ((Math.random() * 2)-1) + offset_left;
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// adding site
g.nodes.push({
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label: 'Maguelonne Roux',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2020/01/research_pasteur-maguelonne_roux-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/fr-maguelonne-roux/',
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});
//link to content
g.edges.push({
id: 18489138400,
size: 0.5,
source: 18489,
target: 138400 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 104985) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 18489104985,
size: 0.5,
source: 18489,
target: 104985 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 218702,
label: 'Marie Schmit',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2024/01/research_pasteur-enmarie-schmitfrmarie-schmit-moi-photo-150x150.jpeg',
page_url: 'https://research.pasteur.fr/en/member/marie-schmit/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 18489218702,
size: 0.5,
source: 18489,
target: 218702 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 218693,
label: 'Raphaël Tackx',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/member/raphael-tackx/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 18489218693,
size: 0.5,
source: 18489,
target: 218693 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 90107) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 1848990107,
size: 0.5,
source: 18489,
target: 90107 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 7763) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 184897763,
size: 0.5,
source: 18489,
target: 7763 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 187500,
label: 'Nicolas Traut',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2022/09/research_pasteur-nicolas-traut-photo-nicolas-upscaled-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/nicolas-traut/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 18489187500,
size: 0.5,
source: 18489,
target: 187500 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 2237) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 184892237,
size: 0.5,
source: 18489,
target: 2237 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 101015) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 18489101015,
size: 0.5,
source: 18489,
target: 101015 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 7762,
label: 'Stevenn Volant',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_stevennvolant-150x150.png',
page_url: 'https://research.pasteur.fr/en/member/stevenn-volant/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 184897762,
size: 0.5,
source: 18489,
target: 7762 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 57911,
label: 'Anna Zhukova',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/11/research_pasteur-anna-zhukova-anna2024-1-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/anna-zhukova/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 1848957911,
size: 0.5,
source: 18489,
target: 57911 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 214061,
label: 'Laurent Essioux',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/member/laurent-essioux/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 18489214061,
size: 0.5,
source: 18489,
target: 214061 });
var s = new sigma({
//container: document.getElementById('graph-main'),
graph: g,
renderer: {
// IMPORTANT:
// This works only with the canvas renderer, so the
// renderer type set as "canvas" is necessary here.
container: document.getElementById('graph-main'),
type: 'canvas'
},
settings: {
minNodeSize: 6,
maxNodeSize: 35,
mouseWheelEnabled: false,
font: 'Montserrat',
labelThreshold:25,
borderSize:1,
defaultNodeBorderColor: '#999',
sideMargin:25,
}
});
// We first need to save the original colors of our
// nodes and edges, like this:
s.graph.nodes().forEach(function(n) {
n.originalColor = n.color;
});
s.graph.edges().forEach(function(e) {
e.originalColor = e.color;
});
// When a node is clicked, we check for each node
// if it is a neighbor of the clicked one. If not,
// we set its color as grey, and else, it takes its
// original color.
// We do the same for the edges, and we only keep
// edges that have both extremities colored.
s.bind('clickNode', function(e) {
var nodeId = e.data.node.id,
toKeep = s.graph.neighbors(nodeId);
toKeep[nodeId] = e.data.node;
s.graph.nodes().forEach(function(n) {
if (toKeep[n.id])
n.color = '#35a9f5';
else
n.color = '#dddddd';
});
s.graph.edges().forEach(function(e) {
if (toKeep[e.source] && toKeep[e.target])
e.color = '#35a9f5';
else
e.color = '#dddddd';
});
// Since the data has been modified, we need to
// call the refresh method to make the colors
// update effective.
s.refresh();
});
// When the stage is clicked, we just color each
// node and edge with its original color.
s.bind('clickStage', function(e) {
s.graph.nodes().forEach(function(n) {
n.color = n.originalColor;
});
s.graph.edges().forEach(function(e) {
e.color = e.originalColor;
});
// Same as in the previous event:
s.refresh();
});
s.bind("doubleClickNode", function (e) {
$("#canvas-wrap, .sigma-scene, .sigma-mouse").val();
ajax_load_page( e.data.node.page_url );
});
var c = s.camera;
s.bind("rightClickStage", function (e) {
sigma.misc.animation.camera(c, {
ratio: c.ratio * c.settings('zoomingRatio')
}, {
duration: 200
});
});
// Configure the noverlap layout:
var noverlapListener = s.configNoverlap({
nodeMargin: 10,
scaleNodes: 0.3,
gridSize: 1,
easing: 'quadraticInOut', // animation transition function
duration: 4000 // animation duration. Long here for the purposes of this example only
});
// Bind the events:
noverlapListener.bind('start stop interpolate', function(e) {
//console.log(e.type);
if(e.type === 'start') {
//console.time('noverlap');
}
if(e.type === 'interpolate') {
//console.timeEnd('noverlap');
}
});
// Start the layout:
s.startNoverlap();
//s.refresh();
// Initialize the dragNodes plugin:
var dragListener = sigma.plugins.dragNodes(s, s.renderers[0]);
dragListener.bind('startdrag', function(event) {
});
dragListener.bind('drag', function(event) {
});
dragListener.bind('drop', function(event) {
});
dragListener.bind('dragend', function(event) {
});