GUIDE
- Left-click and drag the background to move the graph
- Left-click and drag the nodes to reorganize
- Left-click a node to view first level connections
- Double left-click a node to navigate to its page
- Double left-click the background to zoom in
- Right-click the background to zoom out
sigma.utils.pkg('sigma.canvas.nodes');
sigma.canvas.nodes.image = (function() {
var _cache = {},
_loading = {},
_callbacks = {};
// Return the renderer itself:
var renderer = function(node, context, settings) {
var args = arguments,
prefix = settings('prefix') || '',
size = node[prefix + 'size'],
color = node.color || settings('defaultNodeColor'),
url = node.url;
if (_cache[url]) {
context.save();
// Draw the clipping disc:
context.beginPath();
context.arc(
node[prefix + 'x'],
node[prefix + 'y'],
node[prefix + 'size'],
0,
Math.PI * 2,
true
);
context.closePath();
context.clip();
// Draw the image
context.drawImage(
_cache[url],
node[prefix + 'x'] - size,
node[prefix + 'y'] - size,
2 * size,
2 * size
);
// Quit the "clipping mode":
context.restore();
// Draw the border:
context.beginPath();
context.arc(
node[prefix + 'x'],
node[prefix + 'y'],
node[prefix + 'size'],
0,
Math.PI * 2,
true
);
context.lineWidth = 1;
context.strokeStyle = node.color || settings('defaultNodeColor');
context.stroke();
} else {
sigma.canvas.nodes.image.cache(url);
sigma.canvas.nodes.def.apply(
sigma.canvas.nodes,
args
);
}
};
// Let's add a public method to cache images, to make it possible to
// preload images before the initial rendering:
renderer.cache = function(url, callback) {
if (callback)
_callbacks[url] = callback;
if (_loading[url])
return;
var img = new Image();
img.onload = function() {
_loading[url] = false;
_cache[url] = img;
if (_callbacks[url]) {
_callbacks[url].call(this, img);
delete _callbacks[url];
}
};
_loading[url] = true;
img.src = url;
};
return renderer;
})();
var i,
s,
o,
offset_left = 0.5,
N = 1,
E = 40,
C = 5,
d = 0.5,
cs = [],
g = {
nodes: [],
edges: []
};
if (!sigma.classes.graph.hasMethod('neighbors')){
sigma.classes.graph.addMethod('neighbors', function(nodeId) {
var k,
neighbors = {},
index = this.allNeighborsIndex[nodeId] || {};
for (k in index)
neighbors[k] = this.nodesIndex[k];
return neighbors;
});
}
//adding the central node
g.nodes.push({
id: 104999,
label: 'Yoann Dufresne',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2018/03/research_pasteur-profile-150x150.jpg',
x: 0,
y: 0,
size: 30,
color: '#DDDDDD'
});
var biggest_node_size = 0;
N=5
// adding node
var x_node = Math.cos(2 * 0 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 0 * Math.PI / N) * 10;
g.nodes.push({
id: 146929,
label: 'PROJECT: 10X Genomics barcode ordering',
x: x_node,
y: y_node,
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2020/09/research_pasteur-10x-genomics-barcode-ordering-nice-corrected-d2-150x150.png',
page_url: 'https://research.pasteur.fr/en/project/10x-genomics-barcode-ordering/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 104999146929,
size: 0.5,
source: 104999,
target: 146929,
});
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 104999) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 146929104999,
size: 0.5,
source: 146929,
target: 104999 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 119690,
label: 'Rayan Chikhi',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2019/05/research_pasteur-photo_pasteur-150x150.png',
page_url: 'https://research.pasteur.fr/en/member/rayan-chikhi/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 146929119690,
size: 0.5,
source: 146929,
target: 119690 });
// adding node
var x_node = Math.cos(2 * 1 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 1 * Math.PI / N) * 10;
g.nodes.push({
id: 119692,
label: 'TEAM: Sequence Bioinformatics',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/team/sequence-bioinformatics/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 104999119692,
size: 0.5,
source: 104999,
target: 119692,
});
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 104999) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 119692104999,
size: 0.5,
source: 119692,
target: 104999 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 104949,
label: 'Mélanie Bernardini Ridel',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2018/03/research_pasteur-melanie-bernardini-ridel-thumbnail-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/melanie-ridel/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 119692104949,
size: 0.5,
source: 119692,
target: 104949 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 148457,
label: 'Camila Duitama González',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2021/08/research_pasteur-fotocamila-e1630400272906-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/camila-duitama-gonzalez/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 119692148457,
size: 0.5,
source: 119692,
target: 148457 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 180038,
label: 'Francesco Andreace',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/member/francesco-andreace/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 119692180038,
size: 0.5,
source: 119692,
target: 180038 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 226204,
label: 'Timothé Rouzé',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/member/timothe-rouze/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 119692226204,
size: 0.5,
source: 119692,
target: 226204 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 226214,
label: 'Yoshihiro Shibuya',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/member/yoshihiro-shibuya/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 119692226214,
size: 0.5,
source: 119692,
target: 226214 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 226209,
label: 'Gaëtan Benoit',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/member/gaetan-benoit/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 119692226209,
size: 0.5,
source: 119692,
target: 226209 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 234035,
label: 'Kristen Curry',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/member/kristen-curry/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 119692234035,
size: 0.5,
source: 119692,
target: 234035 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 119690) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 119692119690,
size: 0.5,
source: 119692,
target: 119690 });
// adding node
var x_node = Math.cos(2 * 2 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 2 * Math.PI / N) * 10;
g.nodes.push({
id: 110860,
label: 'SOFTWARE: BPM – Beautiful Pattern Matching',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/software/bpm-beautiful-pattern-matching/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 104999110860,
size: 0.5,
source: 104999,
target: 110860,
});
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 104999) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 110860104999,
size: 0.5,
source: 110860,
target: 104999 });
// adding node
var x_node = Math.cos(2 * 3 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 3 * Math.PI / N) * 10;
g.nodes.push({
id: 110826,
label: 'PROJECT: Bioconvert',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/project/bioconvert/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 104999110826,
size: 0.5,
source: 104999,
target: 110826,
});
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 63328,
label: 'Anne Biton',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2018/09/research_pasteur-img_e2453-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/anne-biton/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 11082663328,
size: 0.5,
source: 110826,
target: 63328 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 104972,
label: 'Bryan Brancotte',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2018/03/research_pasteur-me-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/bryan-brancotte/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 110826104972,
size: 0.5,
source: 110826,
target: 104972 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 104999) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 110826104999,
size: 0.5,
source: 110826,
target: 104999 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 82340,
label: 'Kenzo-Hugo Hillion',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2017/05/research_pasteur-img_5340-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/fr-kenzo-hugo-hillion/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 11082682340,
size: 0.5,
source: 110826,
target: 82340 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 81431,
label: 'Etienne Kornobis',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2017/06/research_pasteur-ekornobis-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/etienne-kornobis/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 11082681431,
size: 0.5,
source: 110826,
target: 81431 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 7847,
label: 'Pierre Lechat',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_fig37-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/pierre-lechat/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 1108267847,
size: 0.5,
source: 110826,
target: 7847 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 57915,
label: 'Rachel Legendre',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/11/research_pasteur-rachel-legendre-img-20201028-145758-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/rachel-legendre/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 11082657915,
size: 0.5,
source: 110826,
target: 57915 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 57758,
label: 'Frédéric Lemoine',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/11/research_pasteur-frederic-lemoine-lemoine-frederic-26-small-crop-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/frederic-lemoine/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 11082657758,
size: 0.5,
source: 110826,
target: 57758 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 74050,
label: 'Blaise Li',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2016/07/research.pasteur.fr_blaise-low-resolution-150x150.png',
page_url: 'https://research.pasteur.fr/en/member/blaise-li/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 11082674050,
size: 0.5,
source: 110826,
target: 74050 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 63337,
label: 'Nicolas Maillet',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2017/01/research.pasteur.fr_690123-1-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/nicolas-maillet/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 11082663337,
size: 0.5,
source: 110826,
target: 63337 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 53076,
label: 'Amandine Perrin',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/10/research.pasteur.fr_untitled4-142x150.jpg',
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// adding site
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url: 'https://research.pasteur.fr/wp-content/uploads/2016/11/research_pasteur-francois-laurent-moi-150x150.jpg',
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//check if content already exist
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label: 'Sébastien MELLA',
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// adding site
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label: 'Hervé Menager',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/10/research.pasteur.fr_face-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/herve-menager/',
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color: '#dddddd'
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// adding site
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label: 'Arnaud MENG',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2023/10/research_pasteur-enarnaud-mengfrarnaud-meng-arnaud-meng-1-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/arnaud-meng/',
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// adding site
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type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2022/10/research_pasteur-juliette-meyer-photo1-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/juliette-meyer/',
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// adding site
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label: 'Gaël Millot',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2016/11/research.pasteur.fr_gael-portrait-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/gael-millot/',
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// adding site
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label: 'Olivier Mirabeau',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2021/02/research_pasteur-olivier-mirabeau-omirabeau-badge-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/olivier-mirabeau/',
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// adding site
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label: 'Damien Mornico',
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url: 'https://research.pasteur.fr/wp-content/uploads/2016/11/research.pasteur.fr_3c89054-150x150.jpeg',
page_url: 'https://research.pasteur.fr/en/member/damien-mornico/',
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//check if content already exist
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// adding site
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type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2016/06/research.pasteur.fr_p1040999_crop-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/thomas-obadia/',
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label: 'Rania Ouazahrou',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/member/rania-ouazahrou/',
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// adding site
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label: 'Adrien Pain',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2016/11/research.pasteur.fr_dsc_8827_2-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/adrien-pain/',
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//check if content already exist
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// adding site
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label: 'Emmanuelle Permal',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2020/02/research_pasteur-pasteur2-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/emmanuelle-permal/',
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//check if content already exist
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// adding site
g.nodes.push({
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label: 'Emeline Perthame',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2017/02/research_pasteur-emeline-perthame-2022-01-13-14.37.20-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/emeline-perthame/',
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// adding site
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label: 'Natalia Pietrosemoli',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2016/03/research.pasteur.fr_natphoto-1-150x150.png',
page_url: 'https://research.pasteur.fr/en/member/natalia-pietrosemoli/',
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// adding site
g.nodes.push({
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label: 'Rémi Planel',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2019/10/research_pasteur-photos_pasteur-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/remi-planel/',
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color: '#dddddd'
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// adding site
g.nodes.push({
id: 138400,
label: 'Maguelonne Roux',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2020/01/research_pasteur-maguelonne_roux-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/fr-maguelonne-roux/',
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color: '#dddddd'
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y_site = y_node + ((Math.random() * 2)-1) + offset_left;
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// adding site
g.nodes.push({
id: 104985,
label: 'Violaine Saint-André',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2018/04/research_pasteur-portraitcoupe-1-150x150.jpeg',
page_url: 'https://research.pasteur.fr/en/member/violaine-saint-andre/',
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y: y_site,
size: 10,
color: '#dddddd'
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//check if content already exist
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// adding site
g.nodes.push({
id: 218702,
label: 'Marie Schmit',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2024/01/research_pasteur-enmarie-schmitfrmarie-schmit-moi-photo-150x150.jpeg',
page_url: 'https://research.pasteur.fr/en/member/marie-schmit/',
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y: y_site,
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color: '#dddddd'
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//check if content already exist
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// adding site
g.nodes.push({
id: 218693,
label: 'Raphaël Tackx',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/member/raphael-tackx/',
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y: y_site,
size: 10,
color: '#dddddd'
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//check if content already exist
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y_site = y_node + ((Math.random() * 2)-1) - offset_left;
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y_site = y_node + ((Math.random() * 2)-1) + offset_left;
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// adding site
g.nodes.push({
id: 90107,
label: 'Najwa Taib',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2017/05/research_pasteur-photo_ntaib-150x150.jpeg',
page_url: 'https://research.pasteur.fr/en/member/najwa-taib/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
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//check if content already exist
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// adding site
g.nodes.push({
id: 187500,
label: 'Nicolas Traut',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2022/09/research_pasteur-nicolas-traut-photo-nicolas-upscaled-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/nicolas-traut/',
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y: y_site,
size: 10,
color: '#dddddd'
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//check if content already exist
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y_site = y_node + ((Math.random() * 2)-1) + offset_left;
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// adding site
g.nodes.push({
id: 2237,
label: 'Hugo Varet',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/03/IMG_5255-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/hugo-varet/',
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y: y_site,
size: 10,
color: '#dddddd'
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//check if content already exist
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y_site = y_node + ((Math.random() * 2)-1) - offset_left;
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y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 101015,
label: 'Amaury Vaysse',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2018/06/research_pasteur-photo_av-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/amaury-vaysse/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
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//check if content already exist
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y_site = y_node + ((Math.random() * 2)-1) + offset_left;
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// adding site
g.nodes.push({
id: 7762,
label: 'Stevenn Volant',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/07/research.pasteur.fr_stevennvolant-150x150.png',
page_url: 'https://research.pasteur.fr/en/member/stevenn-volant/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
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target: 7762 });
//check if content already exist
// update node size depending on the amount of edges
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n.size = n.size + 8;
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});
//link to content
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//check if content already exist
if (x_node<0){
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y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 906,
label: 'Marie-Agnès Dillies',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2018/09/research_pasteur-photomadillies2-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/marie-agnes-dillies/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
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g.edges.push({
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var s = new sigma({
//container: document.getElementById('graph-main'),
graph: g,
renderer: {
// IMPORTANT:
// This works only with the canvas renderer, so the
// renderer type set as "canvas" is necessary here.
container: document.getElementById('graph-main'),
type: 'canvas'
},
settings: {
minNodeSize: 6,
maxNodeSize: 35,
mouseWheelEnabled: false,
font: 'Montserrat',
labelThreshold:25,
borderSize:1,
defaultNodeBorderColor: '#999',
sideMargin:25,
}
});
// We first need to save the original colors of our
// nodes and edges, like this:
s.graph.nodes().forEach(function(n) {
n.originalColor = n.color;
});
s.graph.edges().forEach(function(e) {
e.originalColor = e.color;
});
// When a node is clicked, we check for each node
// if it is a neighbor of the clicked one. If not,
// we set its color as grey, and else, it takes its
// original color.
// We do the same for the edges, and we only keep
// edges that have both extremities colored.
s.bind('clickNode', function(e) {
var nodeId = e.data.node.id,
toKeep = s.graph.neighbors(nodeId);
toKeep[nodeId] = e.data.node;
s.graph.nodes().forEach(function(n) {
if (toKeep[n.id])
n.color = '#35a9f5';
else
n.color = '#dddddd';
});
s.graph.edges().forEach(function(e) {
if (toKeep[e.source] && toKeep[e.target])
e.color = '#35a9f5';
else
e.color = '#dddddd';
});
// Since the data has been modified, we need to
// call the refresh method to make the colors
// update effective.
s.refresh();
});
// When the stage is clicked, we just color each
// node and edge with its original color.
s.bind('clickStage', function(e) {
s.graph.nodes().forEach(function(n) {
n.color = n.originalColor;
});
s.graph.edges().forEach(function(e) {
e.color = e.originalColor;
});
// Same as in the previous event:
s.refresh();
});
s.bind("doubleClickNode", function (e) {
$("#canvas-wrap, .sigma-scene, .sigma-mouse").val();
ajax_load_page( e.data.node.page_url );
});
var c = s.camera;
s.bind("rightClickStage", function (e) {
sigma.misc.animation.camera(c, {
ratio: c.ratio * c.settings('zoomingRatio')
}, {
duration: 200
});
});
// Configure the noverlap layout:
var noverlapListener = s.configNoverlap({
nodeMargin: 10,
scaleNodes: 0.3,
gridSize: 1,
easing: 'quadraticInOut', // animation transition function
duration: 4000 // animation duration. Long here for the purposes of this example only
});
// Bind the events:
noverlapListener.bind('start stop interpolate', function(e) {
//console.log(e.type);
if(e.type === 'start') {
//console.time('noverlap');
}
if(e.type === 'interpolate') {
//console.timeEnd('noverlap');
}
});
// Start the layout:
s.startNoverlap();
//s.refresh();
// Initialize the dragNodes plugin:
var dragListener = sigma.plugins.dragNodes(s, s.renderers[0]);
dragListener.bind('startdrag', function(event) {
});
dragListener.bind('drag', function(event) {
});
dragListener.bind('drop', function(event) {
});
dragListener.bind('dragend', function(event) {
});