GUIDE
- Left-click and drag the background to move the graph
- Left-click and drag the nodes to reorganize
- Left-click a node to view first level connections
- Double left-click a node to navigate to its page
- Double left-click the background to zoom in
- Right-click the background to zoom out
sigma.utils.pkg('sigma.canvas.nodes');
sigma.canvas.nodes.image = (function() {
var _cache = {},
_loading = {},
_callbacks = {};
// Return the renderer itself:
var renderer = function(node, context, settings) {
var args = arguments,
prefix = settings('prefix') || '',
size = node[prefix + 'size'],
color = node.color || settings('defaultNodeColor'),
url = node.url;
if (_cache[url]) {
context.save();
// Draw the clipping disc:
context.beginPath();
context.arc(
node[prefix + 'x'],
node[prefix + 'y'],
node[prefix + 'size'],
0,
Math.PI * 2,
true
);
context.closePath();
context.clip();
// Draw the image
context.drawImage(
_cache[url],
node[prefix + 'x'] - size,
node[prefix + 'y'] - size,
2 * size,
2 * size
);
// Quit the "clipping mode":
context.restore();
// Draw the border:
context.beginPath();
context.arc(
node[prefix + 'x'],
node[prefix + 'y'],
node[prefix + 'size'],
0,
Math.PI * 2,
true
);
context.lineWidth = 1;
context.strokeStyle = node.color || settings('defaultNodeColor');
context.stroke();
} else {
sigma.canvas.nodes.image.cache(url);
sigma.canvas.nodes.def.apply(
sigma.canvas.nodes,
args
);
}
};
// Let's add a public method to cache images, to make it possible to
// preload images before the initial rendering:
renderer.cache = function(url, callback) {
if (callback)
_callbacks[url] = callback;
if (_loading[url])
return;
var img = new Image();
img.onload = function() {
_loading[url] = false;
_cache[url] = img;
if (_callbacks[url]) {
_callbacks[url].call(this, img);
delete _callbacks[url];
}
};
_loading[url] = true;
img.src = url;
};
return renderer;
})();
var i,
s,
o,
offset_left = 0.5,
N = 1,
E = 40,
C = 5,
d = 0.5,
cs = [],
g = {
nodes: [],
edges: []
};
if (!sigma.classes.graph.hasMethod('neighbors')){
sigma.classes.graph.addMethod('neighbors', function(nodeId) {
var k,
neighbors = {},
index = this.allNeighborsIndex[nodeId] || {};
for (k in index)
neighbors[k] = this.nodesIndex[k];
return neighbors;
});
}
//adding the central node
g.nodes.push({
id: 100027,
label: 'Charles Baroud',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2017/12/research_pasteur-dsc0120-150x150.jpg',
x: 0,
y: 0,
size: 30,
color: '#DDDDDD'
});
var biggest_node_size = 0;
N=13
// adding node
var x_node = Math.cos(2 * 0 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 0 * Math.PI / N) * 10;
g.nodes.push({
id: 232584,
label: 'PROJECT: Measuring single-cell susceptibility to antibiotics within monoclonal bacterial populations',
x: x_node,
y: y_node,
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2024/10/research_pasteur-ensingle-cell-bacterial-susceptibility-on-the-chip-research-pasteur-ensingle-cell-bacterial-susceptibility-on-the-chip-screenshot-from-2023-06-12-18-08-05-e1729086572945-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/project/single-cell-bacterial-susceptibility-on-the-chip/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 100027232584,
size: 0.5,
source: 100027,
target: 232584,
});
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4975,
label: 'Andrey Aristov',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/05/research_pasteur-andrey-aristov-img-2727-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/andrey-aristov/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 2325844975,
size: 0.5,
source: 232584,
target: 4975 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 181804,
label: 'Erik Maikranz',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2022/06/research_pasteur-erik-maikranz-img-0344-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/erik-maikranz/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 232584181804,
size: 0.5,
source: 232584,
target: 181804 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 100027) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 232584100027,
size: 0.5,
source: 232584,
target: 100027 });
// adding node
var x_node = Math.cos(2 * 1 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 1 * Math.PI / N) * 10;
g.nodes.push({
id: 225182,
label: 'NEWS: Congratulations to Charles Baroud (Physical Microfluidics and Bioengineering unit) for being awarded an ERC Advanced grant',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/news/congratulations-to-charles-baroud-physical-microfluidics-and-bioengineering-unit-for-being-awarded-an-erc-advanced-grant/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 100027225182,
size: 0.5,
source: 100027,
target: 225182,
});
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 100027) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 225182100027,
size: 0.5,
source: 225182,
target: 100027 });
// adding node
var x_node = Math.cos(2 * 2 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 2 * Math.PI / N) * 10;
g.nodes.push({
id: 208125,
label: 'NEWS: New publication – Apical size and deltaA expression predict adult neural stem cell decisions along lineage progression',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/news/new-publication-apical-size-and-deltaa-expression-predict-adult-neural-stem-cell-decisions-along-lineage-progressionnew-publication/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 100027208125,
size: 0.5,
source: 100027,
target: 208125,
});
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 75781,
label: 'Sara Ortica',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2016/09/research.pasteur.fr_dsc04469-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/sara-ortica/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 20812575781,
size: 0.5,
source: 208125,
target: 75781 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 104707,
label: 'Miriam Labusch',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2018/03/research_pasteur-img_20180307_163728_resized_20180307_043759116-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/miriam-labusch/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 208125104707,
size: 0.5,
source: 208125,
target: 104707 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 155547,
label: 'Valentin Bonnet',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2021/03/research_pasteur-valentin-bonnet-20221030-162954-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/valentin-bonnet/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 208125155547,
size: 0.5,
source: 208125,
target: 155547 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 151445,
label: 'Minh-Son Phan',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2020/12/research_pasteur-minh-son-phan-img-9420-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/minh-son-phan/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 208125151445,
size: 0.5,
source: 208125,
target: 151445 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 75914,
label: 'Sébastien Bedu',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2016/09/research.pasteur.fr_p1000492-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/sebastien-bedu/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 20812575914,
size: 0.5,
source: 208125,
target: 75914 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 1581,
label: 'Jean-Yves Tinevez',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/02/JYT-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/jean-yves-tinevez/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 2081251581,
size: 0.5,
source: 208125,
target: 1581 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 100027) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 208125100027,
size: 0.5,
source: 208125,
target: 100027 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 64150,
label: 'Laure Bally-Cuif',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2016/04/research.pasteur.fr_laure_bally-cuiff-150x150.png',
page_url: 'https://research.pasteur.fr/en/member/laure-bally-cuif/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 20812564150,
size: 0.5,
source: 208125,
target: 64150 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 75880,
label: 'Nicolas Dray',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2016/09/research.pasteur.fr_nico1-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/nicolas-dray/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 20812575880,
size: 0.5,
source: 208125,
target: 75880 });
// adding node
var x_node = Math.cos(2 * 3 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 3 * Math.PI / N) * 10;
g.nodes.push({
id: 202473,
label: 'NEWS: New publication – Transient suppression of SUMOylation in embryonic stem cells generates embryo like structures',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/news/new-publication-transient-suppression-of-sumoylation-in-embryonic-stem-cells-generates-embryo-like-structures/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 100027202473,
size: 0.5,
source: 100027,
target: 202473,
});
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4129,
label: 'Jack Christophe Cossec',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2015/09/research.pasteur.fr_photowebsite2-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/jack-christophe-cossec/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 2024734129,
size: 0.5,
source: 202473,
target: 4129 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 104407,
label: 'Tatiana Traboulsi',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2019/07/research_pasteur-tatiana-profile-pic-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/tatiana-traboulsi/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 202473104407,
size: 0.5,
source: 202473,
target: 104407 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 100201,
label: 'Sebastien Sart',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/member/sebastien-sart/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 202473100201,
size: 0.5,
source: 202473,
target: 100201 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 65751,
label: 'Yann Loe-Mie',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2016/08/research.pasteur.fr_img_0998-1-150x150.jpeg',
page_url: 'https://research.pasteur.fr/en/member/yann-loe-mi/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 20247365751,
size: 0.5,
source: 202473,
target: 65751 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 8564,
label: 'Ilan Theurillat',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/?post_type=member&p=8564',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 2024738564,
size: 0.5,
source: 202473,
target: 8564 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 100027) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 202473100027,
size: 0.5,
source: 202473,
target: 100027 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 4125,
label: 'Anne Dejean',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2016/03/research.pasteur.fr_anne-dejean-4-150x150.png',
page_url: 'https://research.pasteur.fr/en/member/anne-dejean/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 2024734125,
size: 0.5,
source: 202473,
target: 4125 });
// adding node
var x_node = Math.cos(2 * 4 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 4 * Math.PI / N) * 10;
g.nodes.push({
id: 182341,
label: 'NEWS: New publication – High resolution microfluidic assay and probabilistic modeling reveal cooperation between T cells in tumor killing, Nature Communications, June 3, 2022',
x: x_node,
y: y_node,
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/news/new-publication-high-resolution-microfluidic-assay-and-probabilistic-modeling-reveal-cooperation-between-t-cells-in-tumor-killing-nature-communications-june-3-2022/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 100027182341,
size: 0.5,
source: 100027,
target: 182341,
});
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
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label: 'Madison Lenormand',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2021/10/research_pasteur-madison-lenormand-e1633695343496-150x150.jpeg',
page_url: 'https://research.pasteur.fr/en/member/madison-lenormand/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 100029168665,
size: 0.5,
source: 100029,
target: 168665 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 204971,
label: 'Elisa Lenzi',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2023/07/research_pasteur-elisa-lenzi-elisa-lenzi-photo-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/elisa-lenzi/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 100029204971,
size: 0.5,
source: 100029,
target: 204971 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 216060,
label: 'Emmanouil Angelidakis',
type: 'image',
url: '',
page_url: 'https://research.pasteur.fr/en/member/emmanouil-angelidakis/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 100029216060,
size: 0.5,
source: 100029,
target: 216060 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 219952,
label: 'Clara Delahousse',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2024/02/research_pasteur-enclara-delahoussefrclara-delahousse-research-pasteur-enclara-delahoussefrclara-delahousse-photo-delahousse-2-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/clara-delahousse/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 100029219952,
size: 0.5,
source: 100029,
target: 219952 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 100027) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 100029100027,
size: 0.5,
source: 100029,
target: 100027 });
// adding node
var x_node = Math.cos(2 * 12 * Math.PI / N) * 10;
var y_node = Math.sin(2 * 12 * Math.PI / N) * 10;
g.nodes.push({
id: 71491,
label: 'PROGRAM_PROJECT: Quantitative biology',
x: x_node,
y: y_node,
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2016/07/research.pasteur.fr_bandeau-quantitative-biology-2-150x150.png',
page_url: 'https://research.pasteur.fr/en/program_project/quantitative-biology/',
size: 35,
color: '#DDDDDD'
});
//link content to central post
g.edges.push({
id: 10002771491,
size: 0.5,
source: 100027,
target: 71491,
});
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 78773) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 7149178773,
size: 0.5,
source: 71491,
target: 78773 });
//check if content already exist
// update node size depending on the amount of edges
g.nodes.forEach(function(n) {
if (n.id == 100027) {
n.size = n.size + 8;
}
});
//link to content
g.edges.push({
id: 71491100027,
size: 0.5,
source: 71491,
target: 100027 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 95285,
label: 'Thomas Gregor',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2017/09/research_pasteur-gregor_pic2-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/thomas-gregor/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 7149195285,
size: 0.5,
source: 71491,
target: 95285 });
//check if content already exist
if (x_node<0){
x_site = x_node + ((Math.random() * 2)-1) - offset_left;
}else{
x_site = x_node + ((Math.random() * 2)-1) + offset_left;
}
if (y_node<0){
y_site = y_node + ((Math.random() * 2)-1) - offset_left;
}else{
y_site = y_node + ((Math.random() * 2)-1) + offset_left;
}
// adding site
g.nodes.push({
id: 50133,
label: 'Jean-Baptiste Masson',
type: 'image',
url: 'https://research.pasteur.fr/wp-content/uploads/2018/06/research_pasteur-jbm_photo_serieux_low_res-150x150.jpg',
page_url: 'https://research.pasteur.fr/en/member/jean-baptiste-masson/',
x: x_site,
y: y_site,
size: 10,
color: '#dddddd'
});
//link to content
g.edges.push({
id: 7149150133,
size: 0.5,
source: 71491,
target: 50133 });
var s = new sigma({
//container: document.getElementById('graph-main'),
graph: g,
renderer: {
// IMPORTANT:
// This works only with the canvas renderer, so the
// renderer type set as "canvas" is necessary here.
container: document.getElementById('graph-main'),
type: 'canvas'
},
settings: {
minNodeSize: 6,
maxNodeSize: 35,
mouseWheelEnabled: false,
font: 'Montserrat',
labelThreshold:25,
borderSize:1,
defaultNodeBorderColor: '#999',
sideMargin:25,
}
});
// We first need to save the original colors of our
// nodes and edges, like this:
s.graph.nodes().forEach(function(n) {
n.originalColor = n.color;
});
s.graph.edges().forEach(function(e) {
e.originalColor = e.color;
});
// When a node is clicked, we check for each node
// if it is a neighbor of the clicked one. If not,
// we set its color as grey, and else, it takes its
// original color.
// We do the same for the edges, and we only keep
// edges that have both extremities colored.
s.bind('clickNode', function(e) {
var nodeId = e.data.node.id,
toKeep = s.graph.neighbors(nodeId);
toKeep[nodeId] = e.data.node;
s.graph.nodes().forEach(function(n) {
if (toKeep[n.id])
n.color = '#35a9f5';
else
n.color = '#dddddd';
});
s.graph.edges().forEach(function(e) {
if (toKeep[e.source] && toKeep[e.target])
e.color = '#35a9f5';
else
e.color = '#dddddd';
});
// Since the data has been modified, we need to
// call the refresh method to make the colors
// update effective.
s.refresh();
});
// When the stage is clicked, we just color each
// node and edge with its original color.
s.bind('clickStage', function(e) {
s.graph.nodes().forEach(function(n) {
n.color = n.originalColor;
});
s.graph.edges().forEach(function(e) {
e.color = e.originalColor;
});
// Same as in the previous event:
s.refresh();
});
s.bind("doubleClickNode", function (e) {
$("#canvas-wrap, .sigma-scene, .sigma-mouse").val();
ajax_load_page( e.data.node.page_url );
});
var c = s.camera;
s.bind("rightClickStage", function (e) {
sigma.misc.animation.camera(c, {
ratio: c.ratio * c.settings('zoomingRatio')
}, {
duration: 200
});
});
// Configure the noverlap layout:
var noverlapListener = s.configNoverlap({
nodeMargin: 10,
scaleNodes: 0.3,
gridSize: 1,
easing: 'quadraticInOut', // animation transition function
duration: 4000 // animation duration. Long here for the purposes of this example only
});
// Bind the events:
noverlapListener.bind('start stop interpolate', function(e) {
//console.log(e.type);
if(e.type === 'start') {
//console.time('noverlap');
}
if(e.type === 'interpolate') {
//console.timeEnd('noverlap');
}
});
// Start the layout:
s.startNoverlap();
//s.refresh();
// Initialize the dragNodes plugin:
var dragListener = sigma.plugins.dragNodes(s, s.renderers[0]);
dragListener.bind('startdrag', function(event) {
});
dragListener.bind('drag', function(event) {
});
dragListener.bind('drop', function(event) {
});
dragListener.bind('dragend', function(event) {
});