publication [25945]

Accurate profiling of microbial communities for shotgun metagenomic sequencing with Meteor2.

Microbiome

Ghozlane A, Thirion F, Plaza Oñate F, Gauthier F, Le Chatelier E, Annamalé A, Almeida M, Ehrlich SD, Pons N

Common DNA sequence variation influences epigenetic aging in African populations.

Communications biology

Meeks GL, Scelza B, Asnake HM, Prall S, Patin E, Froment A, Fagny M, Quintana-Murci L, Henn BM, Gopalan S

Pulsatile dynamics propagate crystalline order in the developing Drosophila eye

Dev Cell

Lydie Couturier, Juan Luna-Escalante, Khallil Mazouni, Claire Mestdagh, Minh-Son Phan, Jean-Yves Tinevez, François Schweisguth, Francis Corson

Pulsatile dynamics propagate crystalline order in the developing Drosophila eye.

Developmental cell

Couturier L, Luna-Escalante J, Mazouni K, Mestdagh C, Phan MS, Tinevez JY, Schweisguth F, Corson F

Urine PCR testing as an effective method for early diagnosis of leptospirosis.

Microbiology spectrum

Le Turnier P, Zenou M, Nacher M, Higel N, Jaonasoa J, Carod J-F, Fremery A, Blanchot T, Bourhy P, Saout M, Epelboin L, Picardeau M

STORIES: learning cell fate landscapes from spatial transcriptomics using optimal transport.

Nature methods

Huizing GJ, Samaran J, Capocefalo D, Audit A, Peyré G, Cantini L

Transposon invasion of primate genomes shaped human inflammatory enhancers and susceptibility to inflammatory diseases.

Nature communications

Ye M, Rotival M, Amigorena S, Zueva E

Viruses and virus satellites of haloarchaea and their nanosized DPANN symbionts reveal intricate nested interactions

Nature Microbiology

Zhou Y, Gutiérrez-Preciado A, Liu Y, Moreira D, Yakimov MM, López-García P, Krupovic M

No innocent bystanders: pertussis vaccination and evolutionary parallelisms between Bordetella parapertussis and Bordetella pertussis.

Microbial genomics

Bouchez V, Moreno-Mingorance A, Mir-Cros A, Landier A, Armatys N, Guillot S, Martín-Gómez MT, Rodrigues C, Toubiana J, Bento AI, Weigand MR, González-López JJ, Brisse S

Methanobrevibacter smithii.

Trends in microbiology

Villa R, Martin-Gallausiaux C, Gribaldo S, Borrel G

Polygenic viral factors enable efficient mosquito-borne transmission of African Zika virus.

Nature communications

Torii S, Lord JS, Lavina M, Prot M, Lecuyer A, Diagne CT, Faye O, Faye O, Sall AA, Bonsall MB, Simon-Lorière E, Montagutelli X, Lambrechts L

Virome sequencing and analysis of Aedes aegypti and Aedes albopictus from ecologically different sites in the Philippines.

Parasites & vectors

Asin ICA, Egana JMC, Paul RE, Bautista MAM

IL-26 from innate lymphoid cells regulates early-life gut epithelial homeostasis by shaping microbiota composition.

The EMBO journal

Salloum Y, Gros G, Quintero-Castillo K, Garcia-Baudino C, Rabahi S, Janardhana Kurup A, Diabangouaya P, Pérez-Pascual D, Morales Castro RA, Boekhorst J, Villablanca EJ, Ghigo JM, Feijoo CG, Brugman S, Hernandez PP

Ethical issues and research during infectious disease outbreaks and pandemic

Institut Pasteur Ethics Unit

Female C57BL/6J mice perform distinctive urination behaviour accompanied by ultrasonic vocalisation sequences with a stereotyped temporal organisation.

Behavioural brain research

de Chaumont F, Yvenou G, Perez-Villalba A, Hérault Y, Bourgeron T, Ey E

Whose line is it anyway? Defining sero-positivity cut-offs for infectious disease surveillance.

The Journal of infectious diseases

White MT, Baudemont G, Donnadieu F, Diatta AS, Sarr I, Diagne A, Toure-Balde A, Sarr FD, Faye J, Sokhna C, Bassene H, Vigan-Womas I, Pelleau S, Niang M