-
2025Information maximization for a broad variety of multi-armed bandit games, .
-
2024Approximate information maximization for bandit games, 2024.
-
2024Compression-based inference of network motif sets, PLoS Computational Biology, 2024, 20 (10), pp.e1012460. ⟨10.1371/journal.pcbi.1012460⟩.
-
2024LarvaTagger: manual and automatic tagging of Drosophila larval behaviour., Bioinformatics 2024 Jul; 40(7): .
-
2024Statistical signature of subtle behavioural changes in large-scale behavioural assays, 2024.
-
2023Approximate information for efficient exploration-exploitation strategies Information approximée pour des stratégies d’exploration-exploitation efficaces, Physical Review E , 2023, 109 (5), pp.L052105. ⟨10.1103/PhysRevE.109.L052105⟩.
-
2023Simulation-based inference for non-parametric statistical comparison of biomolecule dynamics., PLoS Comput Biol 2023 Feb; 19(2): e1010088.
-
2022Gillespie Algorithms for Stochastic Multiagent Dynamics in Populations and Networks, Cambridge University Press, 2022, Cambridge Elements: The Structure and Dynamics of Complex Networks, Guido Caldarelli, 978-1-009-23915-8 (ebook). ⟨10.1017/9781009239158⟩.
-
2022Variational inference of fractional Brownian motion with linear computational complexity, Physical Review E , 2022, 106, pp.055311. ⟨10.1103/PhysRevE.106.055311⟩.
-
2022Randomized reference models for temporal networks, SIAM Review, 2022, 64 (4), ⟨10.1137/19M1242252⟩.
-
2022TRamWAy: mapping physical properties of individual biomolecule random motion in large-scale single-particle tracking experiments., Bioinformatics 2022 May; 38(11): 3149-3150.
-
2022Hematopoietic stem cell transplantation chemotherapy causes microglia senescence and peripheral macrophage engraftment in the brain., Nat Med 2022 Mar; 28(3): 517-527.
-
2021Learning physical properties of anomalous random walks using graph neural networks, J. Phys. A: Math. Theor. 54 234001.
-
2020Statistical Tests for Force Inference in Heterogeneous Environments., Sci Rep 2020 03; 10(1): 3783.
-
2019Mapping spatio-temporal dynamics of single biomolecules in living cells, Phys. Biol. 2019 Nov;17(1):015003.
-
2018Single-particle trajectories reveal two-state diffusion-kinetics of hOGG1 proteins on DNA, Nucleic Acids Res. 2018 Jan;.
-
2016Recalibrating disease parameters for increasing realism in modeling epidemics in closed settings, BMC Infect. Dis. 2016 Nov;16(1):676.
-
2016Optimizing experimental parameters for tracking of diffusing particles, Phys Rev E 2016 Aug;94(2-1):022401.
-
2016[Evaluating the epidemic risk from incomplete data], Med Sci (Paris) 2016 May;32(5):506-8.
-
2016Transition state theory demonstrated at the micron scale with out-of-equilibrium transport in a confined environment, Nat Commun 2016 Jan;7:10227.
-
2015Compensating for population sampling in simulations of epidemic spread on temporal contact networks, Nat Commun 2015 Nov;6:8860.
-
2015Temporal Gillespie Algorithm: Fast Simulation of Contagion Processes on Time-Varying Networks, PLoS Comput. Biol. 2015 Oct;11(10):e1004579.
-
2015Harmonic force spectroscopy measures load-dependent kinetics of individual human β-cardiac myosin molecules, Nat Commun 2015 Aug;6:7931.
-
2014How memory generates heterogeneous dynamics in temporal networks, Phys Rev E Stat Nonlin Soft Matter Phys 2014 Oct;90(4):042805.
-
2014Optimal estimation of diffusion coefficients from single-particle trajectories, Phys Rev E Stat Nonlin Soft Matter Phys 2014 Feb;89(2):022726.
-
2013Filopodial retraction force is generated by cortical actin dynamics and controlled by reversible tethering at the tip, Proc. Natl. Acad. Sci. U.S.A. 2013 Nov;110(47):18928-33.
-
2012Intracellular signaling by diffusion: can waves of hydrogen peroxide transmit intracellular information in plant cells?, Front Plant Sci 2012;3:295.