-
2023The respiratory tract microbiome, the pathogen load, and clinical interventions define severity of bacterial pneumonia., Cell Rep Med 2023 Aug; (): 101167.
-
2023Legionella para-effectors target chromatin and promote bacterial replication., Nat Commun 2023 Apr; 14(1): 2154.
-
2022Genomic erosion and horizontal gene transfer shape functional differences of the ExlA toxin in Pseudomonas spp., iScience 2022 Jul; 25(7): 104596.
-
2022Translocated Legionella pneumophila small RNAs mimic eukaryotic microRNAs targeting the host immune response., Nat Commun 2022 Feb; 13(1): 762.
-
2021Reverting the mode of action of the mitochondrial F O F 1-ATPase by Legionella pneumophila preserves its replication niche, Elife. 2021 Dec 9;10:e71978. doi: 10.7554/eLife.71978. Online ahead of print.
-
2020Persistent Legionnaires’ Disease and Associated Antibiotic Treatment Engender a Highly Disturbed Pulmonary Microbiome Enriched in Opportunistic Microorganisms, mBio . 2020 May 19;11(3):e00889-20. doi: 10.1128/mBio.00889-20. .
-
2019More than 18,000 effectors in the Legionella genus genome provide multiple, independent combinations for replication in human cells., Proc Natl Acad Sci U S A 2019 02; 116(6): 2265-2273.
-
2017Dynamics and impact of homologous recombination on the evolution of Legionella pneumophila, PLoS Genet. 2017 Jun;13(6):e1006855.
-
2017The Legionella pneumophila genome evolved to accommodate multiple regulatory mechanisms controlled by the CsrA-system., PLoS Genet 2017 02; 13(2): e1006629.
-
2016Multiple major disease-associated clones of Legionella pneumophila have emerged recently and independently., Genome Res 2016 11; 26(11): 1555-1564.
-
2013[Host epigenetic targeting by Legionella pneumophila], Med Sci (Paris) 2013 Oct;29(10):843-5.
-
2013Legionella pneumophila effector RomA uniquely modifies host chromatin to repress gene expression and promote intracellular bacterial replication, Cell Host Microbe 2013 Apr;13(4):395-405.
-
2013Reductive evolution in Streptococcus agalactiae and the emergence of a host adapted lineage, BMC Genomics 2013;14:252.
-
2012Comparative genomics and transcriptomics of lineages I, II, and III strains of Listeria monocytogenes, BMC Genomics 2012;13:144.
-
2012Deep sequencing defines the transcriptional map of L. pneumophila and identifies growth phase-dependent regulated ncRNAs implicated in virulence, RNA Biol 2012 Apr;9(4):503-19.
-
2011Complete genome sequence of the animal pathogen Listeria ivanovii, which provides insights into host specificities and evolution of the genus Listeria, J. Bacteriol. 2011 Dec;193(23):6787-8.
-
2010Specific real-time PCR for simultaneous detection and identification of Legionella pneumophila serogroup 1 in water and clinical samples., Appl Environ Microbiol 2011 Mar; 77(5): 1708-17.
-
2010Double-stranded RNA adenosine deaminase ADAR-1-induced hypermutated genomes among inactivated seasonal influenza and live attenuated measles virus vaccines, J. Virol. 2011 Mar;85(5):2458-62.
-
2010Genome sequence of Streptococcus gallolyticus: insights into its adaptation to the bovine rumen and its ability to cause endocarditis, J. Bacteriol. 2010 Apr;192(8):2266-76.
-
2009NeMeSys: a biological resource for narrowing the gap between sequence and function in the human pathogen Neisseria meningitidis, Genome Biol. 2009;10(10):R110.
-
2009Legionella pneumophila: population genetics, phylogeny and genomics., Infect Genet Evol 2009 Sep; 9(5): 727-39.
-
2009Legionella pneumophila – Host Interactions: Insights Gained from Comparative Genomics and Cell Biology., Genome Dyn 2009 ; 6(): 170-186.
-
2009Genome sequence of Vibrio splendidus: an abundant planctonic marine species with a large genotypic diversity, Environ. Microbiol. 2009 Aug;11(8):1959-70.
-
2009Genetic editing of HBV DNA by monodomain human APOBEC3 cytidine deaminases and the recombinant nature of APOBEC3G, PLoS ONE 2009;4(1):e4277.
-
2008Atypical association of DDE transposition with conjugation specifies a new family of mobile elements, Mol. Microbiol. 2009 Feb;71(4):948-59.
-
2008Shaping a bacterial genome by large chromosomal replacements, the evolutionary history of Streptococcus agalactiae, Proc. Natl. Acad. Sci. U.S.A. 2008 Oct;105(41):15961-6.
-
2006Specific regions of genome plasticity and genetic diversity of the commensal Escherichia coli A0 34/86, Int. J. Med. Microbiol. 2006 Dec;296(8):541-6.
-
2006Twin gradients in APOBEC3 edited HIV-1 DNA reflect the dynamics of lentiviral replication, Nucleic Acids Res. 2006;34(17):4677-84.
-
2006Genomic diversity and evolution within the species Streptococcus agalactiae, Microbes Infect. 2006 Apr;8(5):1227-43.
-
2006A SAGE approach to identifying novel trans-acting factors involved in the X inactivation process, Cytogenet. Genome Res. 2006;113(1-4):325-35.
-
2005The SrtA Sortase of Streptococcus agalactiae is required for cell wall anchoring of proteins containing the LPXTG motif, for adhesion to epithelial cells, and for colonization of the mouse intestine, Infect. Immun. 2005 Jun;73(6):3342-50.
-
2005Characterization of the flexible genome complement of the commensal Escherichia coli strain A0 34/86 (O83 : K24 : H31)., Microbiology (Reading) 2005 Feb; 151(Pt 2): 385-398.
-
2004Evidence in the Legionella pneumophila genome for exploitation of host cell functions and high genome plasticity, Nat. Genet. 2004 Nov;36(11):1165-73.
-
2004CAAT-Box, Contigs-Assembly and Annotation Tool-Box for genome sequencing projects, Bioinformatics 2004 Mar;20(5):790-7.
-
2003The genome sequence of the entomopathogenic bacterium Photorhabdus luminescens, Nat. Biotechnol. 2003 Nov;21(11):1307-13.
-
2003Multilocus sequence typing system for group B streptococcus, J. Clin. Microbiol. 2003 Jun;41(6):2530-6.
-
2003Comparison of the genome sequences of Listeria monocytogenes and Listeria innocua: clues for evolution and pathogenicity, FEMS Immunol. Med. Microbiol. 2003 Apr;35(3):207-13.
-
2002Genome sequence of Streptococcus agalactiae, a pathogen causing invasive neonatal disease, Mol. Microbiol. 2002 Sep;45(6):1499-513.
-
2000Gene expression profiles in normal and Otx2-/- early gastrulating mouse embryos, Proc. Natl. Acad. Sci. U.S.A. 2000 Dec;97(26):14388-93.
-
2000The virulence plasmid pWR100 and the repertoire of proteins secreted by the type III secretion apparatus of Shigella flexneri, Mol. Microbiol. 2000 Nov;38(4):760-71.
-
1999The 102-kilobase pgm locus of Yersinia pestis: sequence analysis and comparison of selected regions among different Yersinia pestis and Yersinia pseudotuberculosis strains, Infect. Immun. 1999 Sep;67(9):4851-61.