publication [25765]

Investigations into SARS-CoV-2 and other coronaviruses on mink farms in France late in the first year of the COVID-19 pandemic

PLoS ONE

Marine Wasniewski, Franck Boué, Céline Richomme, Etienne Simon-Lorière, Sylvie Van Der Werf, Flora Donati, Vincent Enouf, Yannick Blanchard, Véronique Beven, Estelle Leperchois, Bryce Leterrier, Sandrine Corbet, Meriadeg Le Gouil, Elodie Monchatre-Leroy, Evelyne Picard-Meyer

MArVD2: a machine learning enhanced tool to discriminate between archaeal and bacterial viruses in viral datasets

ISME Communications

Vik D, Bolduc B, Roux S, Sun CL, Pratama AA, Krupovic M, Sullivan MB

Molecular Detection of Orthohantavirus puumalaense in Plasma and Urine Samples from Hospitalized Patients Presenting with a Serologically Confirmed Acute Hantavirus Infection in France.

Journal of clinical microbiology

Reynes JM, Schaeffer L, Papadopoulos P, Ait-Ahmed M, Siby-Diakite D, Ripaux-Lefèvre M, Buivan TP, Lechat S, Vray M, Galempoix JM

Impact of a COVID-19 certificate requirement on vaccine uptake pattern and intention for future vaccination. A cross-sectional study among French adults.

Vaccine

Araujo-Chaveron L, Sicsic J, Moffroid H, Díaz Luévano C, Blondel S, Langot F, Mueller JE

Therapeutic efficacy of artesunate-amodiaquine and artemether-lumefantrine for the treatment of uncomplicated falciparum malaria in Chad: clinical and genetic surveillance.

Malaria journal

Issa MS, Warsame M, Mahamat MHT, Saleh IDM, Boulotigam K, Djimrassengar H, Issa AH, Abdelkader O, Hassoumi M, Djimadoum M, Doderer-Lang C, Ndihiokubwayo JB, Rasmussen C, Menard D

First identification of Cryptosporidium parvum virus 1 (CSpV1) in various subtypes of Cryptosporidium parvum from diarrheic calves, lambs and goat kids from France.

Veterinary research

Adjou KT, Chevillot A, Lucas P, Blanchard Y, Louifi H, Arab R, Mammeri M, Thomas M, Polack B, Karadjian G, Dheilly NM

Chronic Aichi Virus Infection As a Cause of Long-Lasting Multiorgan Involvement in Patients With Primary Immune Deficiencies.

Clinical infectious diseases : an official publication of the Infectious Diseases Society of America

Fourgeaud J, Lecuit MM, Pérot P, Bruneau J, Regnault B, Da Rocha N, Bessaud M, Picard C, Jeziorski É, Fournier B, Levy R, Marçais A, Blanche S, Frange P, Fischer A, Cavazzana M, Ferroni A, Jamet A, Leruez-Ville M, Eloit M, Neven B

New insight into flavivirus maturation from structure/function studies of the yellow fever virus envelope protein complex

mBio

E. Crampon, E. Covernton, M. Vaney, M. Dellarole, S. Sommer, A. Sharma, Ahmed Haouz, Patrick England, J. Lepault, S. Duquerroy, F. Rey, Giovanna Barba-Spaeth

Cohesin contributes to transcriptional repression of stage-specific genes in the human malaria parasite.

EMBO reports

Rosa C, Singh P, Chen P, Sinha A, Claës A, Preiser PR, Dedon PC, Baumgarten S, Scherf A, Bryant JM

Speech reception in young children with autism is selectively indexed by a neural oscillation coupling anomaly.

The Journal of neuroscience : the official journal of the Society for Neuroscience

Wang X, Delgado J, Marchesotti S, Kojovic N, Sperdin HF, Rihs TA, Schaer M, Giraud AL

Escherichia coli SPFH Membrane Microdomain Proteins HflKC Contribute to Aminoglycoside and Oxidative Stress Tolerance.

Microbiology spectrum

Wessel AK, Yoshii Y, Reder A, Boudjemaa R, Szczesna M, Betton JM, Bernal-Bayard J, Beloin C, Lopez D, Völker U, Ghigo JM

Parallel vaccine discourses in Guinea: ‘grounding’ social listening for a non-hegemonic global health

Critical Public Health

Leonardo W Heyerdahl, Frederic Le Marcis, ToTran Nguyen, Arsenii Alenichev, Bienvenu Salim Camara & Koen Peeters Grietens

Characterization of Bacteriophage cd2, a Siphophage Infecting Carnobacterium divergens and a Representative Species of a New Genus of Phage.

Microbiology spectrum

Britton AP, Visser KA, Ongenae VMA, Zhang P, Wassink H, Doerksen TA, Welke CA, Lynch KH, van Belkum MJ, Dennis JJ, Yang X, Claessen D, Briegel A, Martin-Visscher LA

Characterization of Pseudomonas aeruginosa l,d-Transpeptidases and Evaluation of Their Role in Peptidoglycan Adaptation to Biofilm Growth.

Microbiology spectrum

Hugonneau-Beaufet I, Barnier JP, Thiriet-Rupert S, Létoffé S, Mainardi JL, Ghigo JM, Beloin C, Arthur M

The respiratory tract microbiome, the pathogen load, and clinical interventions define severity of bacterial pneumonia.

Cell reports. Medicine

Pérez-Cobas AE, Ginevra C, Rusniok C, Jarraud S, Buchrieser C

West Nile Virus Lineage 2 in Free-Living Corvus cornix Birds in Poland.

Tropical medicine and infectious disease

Niczyporuk JS, Kozdrun W, Czujkowska A, Blanchard Y, Helle M, Dheilly NM, Gonzalez G