publication [25850]

Lifestyle-specific S-nitrosylation of protein cysteine thiols regulates Escherichia coli biofilm formation and resistance to oxidative stress.

NPJ biofilms and microbiomes

Barraud N*, Létoffé S*, Beloin C, Vinh J, Chiapetta G#, Ghigo JM# (*equal contribution, #co-corresponding authors)

Lipoprotein DolP supports proper folding of BamA in the bacterial outer membrane, promoting fitness upon envelope stress.

eLife

Ranava D, Yang Y, Orenday-Tapia L, Rousset F, Turlan C, Morales V, Cui L, Moulin C, Froment C, Munoz G, Rech J, Marcoux J, Caumont-Sarcos A, Albenne C, Bikard D, Ieva R,

A Min-Max Based Hyperparameter Estimation For Domain-Adapted Segmentation Of Amoeboid Cells

2021 IEEE 18th International Symposium on Biomedical Imaging (ISBI)

R Sarkar, S Mukherjee, E Labruyère, JC Olivo-Marin

Nu3D: 3D Nuclei Segmentation from Light-Sheet Microscopy Images of the Embryonic Heart

2021 IEEE 18th International Symposium on Biomedical Imaging (ISBI)

Rituparna Sarkar; Daniel Darby; Héloise Foucambert; Sigolène Meilhac; Jean-Christophe Olivo-Marin

EUCAST rapid antimicrobial susceptibility testing (RAST): analytical performance and impact on patient management.

The Journal of antimicrobial chemotherapy

Berinson B, Olearo F, Both A, Brossmann N, Christner M, Aepfelbacher M, Rohde H

Morphological Reconstruction of Detached Dendritic Spines via Geodesic Path Prediction

2021 IEEE 18th International Symposium on Biomedical Imaging (ISBI)

Sammit Jain, Suvadip Mukherjee, Lydia Danglot, Jean-Christophe Olivo-Marin

New methods to decrypt emerging macropinosome functions during the host-pathogen crosstalk.

Cellular microbiology

Chang YY, Enninga J, Stévenin V,

Virus-induced cell gigantism and asymmetric cell division in archaea

Proceedings of the National Academy of Sciences of the United States of America

Liu J, Cvirkaite-Krupovic V, Baquero DP, Yang Y, Zhang Q, Shen Y, Krupovic M

Sustained high expression of multiple APOBEC3 cytidine deaminases in systemic lupus erythematosus.

Scientific reports

Perez-Bercoff D, Laude H, Lemaire M, Hunewald O, Thiers V, Vignuzzi M, Blanc H, Poli A, Amoura Z, Caval V, Suspène R, Hafezi F, Mathian A, Vartanian JP, Wain-Hobson S

Fitness for purpose of stabilized stool samples for bile acid metabolite analyses.

Scientific reports

Neuberger-Castillo L, Ammerlaan W, Betsou F,

The iPPI-DB initiative: a community-centered database of protein–protein interaction modulators

Bioinformatics

Rachel Torchet, Karen Druart, Luis Checa Ruano, Alexandra Moine-Franel, Hélène Borges, Olivia Doppelt-Azeroual, Bryan Brancotte, Fabien Mareuil, Michael Nilges, Hervé Ménager, Olivier Sperandio

Adaptation to the dietary sugar D-tagatose via genome instability in polyploid Candida albicans cells.

G3 (Bethesda, Md.)

Thomson GJ, Kakade P, Hirakawa MP, Ene IV, Bennett RJ

Malaria parasites differentially sense environmental elasticity during transmission.

EMBO molecular medicine

Ripp J, Kehrer J, Smyrnakou X, Tisch N, Tavares J, Amino R, Ruiz de Almodovar C, Frischknecht F,

Monitoring the proportion of the population infected by SARS-CoV-2 using age-stratified hospitalisation and serological data: a modelling study.

The Lancet. Public health

Hozé N, Paireau J, Lapidus N, Tran Kiem C, Salje H, Severi G, Touvier M, Zins M, de Lamballerie X, Lévy-Bruhl D, Carrat F, Cauchemez S,

Spatial transcriptomics for respiratory research and medicine.

The European respiratory journal

Curras-Alonso S, Soulier J, Walter T, Mueller F, Londoño-Vallejo A, Fouillade C,

Development and clinical validation of loop-mediated isothermal amplification (LAMP) assay to diagnose high HBV DNA levels in resource-limited settings.

Clinical microbiology and infection : the official publication of the European Society of Clinical Microbiology and Infectious Diseases

Vanhomwegen J, Kwasiborski A, Diop A, Boizeau L, Hoinard D, Vray M, Bercion R, Ndiaye B, Dublineau A, Michiyuki S, Manuguerra JC, Sauvage V, Candotti D, Seck A, Laperche S, Shimakawa Y,