publication [25765]

LocalZProjector and DeProj: a toolbox for local 2D projection and accurate morphometrics of large 3D microscopy images.

BMC biology

Herbert S, Valon L, Mancini L, Dray N, Caldarelli P, Gros J, Esposito E, Shorte SL, Bally-Cuif L, Aulner N, Levayer R, Tinevez JY

Multimodal imaging as optical biopsy system for gastritis diagnosis in humans, and input of the mouse model.

EBioMedicine

Bazin T, Krebs A, Jobart-Malfait A, Camilo V, Michel V, Benezeth Y, Marzani F, Touati E, Lamarque D,

Pregnancy complications and Interferon-induced transmembrane proteins (IFITM): balancing antiviral immunity and placental development.

Comptes rendus biologies

Buchrieser J, Schwartz O,

Spatial Distribution and Burden of Emerging Arboviruses in French Guiana.

Viruses

Bailly S, Rousset D, Fritzell C, Hozé N, Ben Achour S, Berthelot L, Enfissi A, Vanhomwegen J, Salje H, Fernandes-Pellerin S, Saout M, Lavergne A, Manuguerra JC, Carod JF, Djossou F, Cauchemez S, Flamand C,

Reconstructing 50,000 years of human history from our DNA: lessons from modern genomics.

Comptes rendus biologies

Rotival M, Cossart P, Quintana-Murci L,

Interplay between the cell envelope and mobile genetic elements shapes gene flow in populations of the nosocomial pathogen Klebsiella pneumoniae.

PLoS biology

Haudiquet M, Buffet A, Rendueles O, Rocha EPC,

Benefits and risks associated with different uses of the COVID-19 vaccine Vaxzevria: a modelling study, France, May to September 2021.

Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin

Tran Kiem C, Andronico A, Bosetti P, Paireau J, Alter L, Boëlle PY, Fontanet A, Lévy-Bruhl D, Cauchemez S,

A review and agenda for integrated disease models including social and behavioural factors.

Nature human behaviour

Bedson J, Skrip LA, Pedi D, Abramowitz S, Carter S, Jalloh MF, Funk S, Gobat N, Giles-Vernick T, Chowell G, de Almeida JR, Elessawi R, Scarpino SV, Hammond RA, Briand S, Epstein JM, Hébert-Dufresne L, Althouse BM,

Beyond the chemical master equation: Stochastic chemical kinetics coupled with auxiliary processes

PLoS computational biology

Lunz D, Batt G, Ruess J, Bonnans JF

ICTV Virus Taxonomy Profile: Thaspiviridae 2021

The Journal of General Virology

Kim JG, Gazi KS, Krupovic M, Rhee SK, ICTV Report Consortium

α-Synuclein fibrils subvert lysosome structure and function for the propagation of protein misfolding between cells through tunneling nanotubes.

PLoS biology

Dilsizoglu Senol A, Samarani M, Syan S, Guardia CM, Nonaka T, Liv N, Latour-Lambert P, Hasegawa M, Klumperman J, Bonifacino JS, Zurzolo C,

The first head-tailed virus, MFTV1, infecting hyperthermophilic methanogenic deep-sea archaea

Environmental Microbiology

Thiroux S, Dupont S, Nesbø CL, Bienvenu N, Krupovic M, L'Haridon S, Marie D, Forterre P, Godfroy A, Geslin C

Dynamics of extended-spectrum beta-lactamase-producing Enterobacterales colonization in long-term carriers following travel abroad.

Microbial genomics

Armand-Lefèvre L, Rondinaud E, Desvillechabrol D, Mullaert J, Clermont O, Petitjean M, Ruppe E, Cokelaer T, Bouchier C, Tenaillon O, Ma L, Nooroya Y, Matheron S, The Voyag-R Study Group , Andremont A, Denamur E, Kennedy SP,

Impact of mass and systematic antibiotic administration on antibiotic resistance in low- and middle-income countries? A systematic review.

International journal of antimicrobial agents

Ramblière L, Guillemot D, Delarocque-Astagneau E, Huynh BT,

Assessing the replicability of spatial gene expression using atlas data from the adult mouse brain.

PLoS biology

Lu S, Ortiz C, Fürth D, Fischer S, Meletis K, Zador A, Gillis J,

Pulmonary mesenchymal stem cells are engaged in distinct steps of host response to respiratory syncytial virus infection.

PLoS pathogens

Brügger M, Démoulins T, Barut GT, Zumkehr B, Oliveira Esteves BI, Mehinagic K, Haas Q, Schögler A, Rameix-Welti MA, Eléouët JF, Moehrlen U, Marti TM, Schmid RA, Summerfield A, Posthaus H, Ruggli N, Hall SRR, Alves MP,