• 2025
  Coleon A, Larrous F, Kergoat L, Tichit M, Hardy D, Obadia T, Kornobis E, Bourhy H, de Melo GD, Hamsters with long COVID present distinct transcriptomic profiles associated with neurodegenerative processes in brainstem, Nat Commun 2025 Jul; 16(1): 6714.
• 2025
  Flavio Alvarez, Guilherme Dias de Melo, Florence Larrous, Lauriane Kergoat, Batiste Boëda, Vincent Michel, Danielle Seilhean, Magali Tichit, David Hing, David Hardy, Etienne Kornobis, Hervé Bourhy, Nicolas Wolff, Célia Caillet-Saguy, The SARS-CoV-2 envelope PDZ binding motif acts as a virulence factor disrupting host’s epithelial cell–cell junctions [brief report], Cellular and Molecular Biology Letters, 2025, 30 (1), pp.80. ⟨10.1186/s11658-025-00758-y⟩.
• 2025
  Vendrell-Fernández S, Beamud B, Abou Haydar Y, Am de Sousa J, Burlaud-Gaillard J, Kornobis E, Raynal B, Vinh J, Bikard D, Ghigo JM, Incomplete lytic cycle of a widespread Bacteroides bacteriophage leads to the formation of defective viral particles., PLoS Biol 2025 Mar; 23(3): e3002787.
• 2024
  Mistretta M, Cimino M, Campagne P, Volant S, Kornobis E, Hebert O, Rochais C, Dallemagne P, Lecoutey C, Tisnerat C, Lepailleur A, Ayotte Y, LaPlante SR, Gangneux N, Záhorszká M, Korduláková J, Vichier-Guerre S, Bonhomme F, Pokorny L, Albert M, Tinevez JY, Manina G, Dynamic microfluidic single-cell screening identifies pheno-tuning compounds to potentiate tuberculosis therapy., Nat Commun 2024 May; 15(1): 4175.
• 2024
  , Dynamic microfluidic single-cell screening identifies pheno-tuning compounds to potentiate tuberculosis therapy, Nature Communications.
• 2023
  Bourdon M, Manet C, Conquet L, Ramaugé Parra C, Kornobis E, Bonnefoy E, Montagutelli X, Susceptibility to Zika virus in a Collaborative Cross mouse strain is induced by Irf3 deficiency in vitro but requires other variants in vivo., PLoS Pathog 2023 Sep; 19(9): e1011446.
• 2023
  O'Donnell S, Yue JX, Saada OA, Agier N, Caradec C, Cokelaer T, De Chiara M, Delmas S, Dutreux F, Fournier T, Friedrich A, Kornobis E, Li J, Miao Z, Tattini L, Schacherer J, Liti G, Fischer G, Telomere-to-telomere assemblies of 142 strains characterize the genome structural landscape in Saccharomyces cerevisiae., Nat Genet 2023 Aug; 55(8): 1390-1399.
• 2023
  Rachel Bellone, Pierre Lechat, Laurence Mousson, Valentine Gilbart, Géraldine Piorkowski, Chloé Bohers, Andres Merits, Etienne Kornobis, Julie Reveillaud, Christophe Paupy, Marie Vazeille, Jean-Philippe Martinet, Yoann Madec, Xavier de Lamballerie, Catherine Dauga, Anna-Bella Failloux, Climate change and vector-borne diseases: a multi-omics approach of temperature-induced changes in the mosquito, Journal of Travel Medicine, 2023, 30 (4), pp.taad062. ⟨10.1093/jtm/taad062⟩.
• 2023
  Chekli Y, Stevick RJ, Kornobis E, Briolat V, Ghigo JM, Beloin C, Escherichia coli Aggregates Mediated by Native or Synthetic Adhesins Exhibit Both Core and Adhesin-Specific Transcriptional Responses., Microbiol Spectr 2023 Apr; (): e0069023.
• 2022
  Juliana Pipoli da Fonseca,Etienne Kornobis,Elodie Turc,Vincent Enouf2,Laure Lemée, Thomas Cokelaer,Marc Monot, Capturing SARS-CoV-2 from patient samples with low viral abundance: a comparative analysis, 2022 12:19274.
• 2022
  Donnarumma E, Kohlhaas M, Vimont E, Kornobis E, Chaze T, Gianetto QG, Matondo M, Moya-Nilges M, Maack C, Wai T, , Mitochondrial Fission Process 1 controls inner membrane integrity and protects against heart failure., Nat Commun 2022 Nov; 13(1): 6634.
• 2022
  Dos Reis R, Kornobis E, Pereira A, Tores F, Carrasco J, Gautier C, Jahannault-Talignani C, Nitschké P, Muchardt C, Schlosser A, Maric HM, Ango F, Allemand E, , Complex regulation of Gephyrin splicing is a determinant of inhibitory postsynaptic diversity., Nat Commun 2022 Jun; 13(1): 3507.
• 2022
  Jacob JM, Di Carlo SE, Stzepourginski I, Lepelletier A, Ndiaye PD, Varet H, Legendre R, Kornobis E, Benabid A, Nigro G, Peduto L, , PDGFRα-induced stromal maturation is required to restrain postnatal intestinal epithelial stemness and promote defense mechanisms., Cell Stem Cell 2022 May; 29(5): 856-868.e5.
• 2021
  de Melo GD, Lazarini F, Larrous F, Feige L, Kornobis E, Levallois S, Marchio A, Kergoat L, Hardy D, Cokelaer T, Pineau P, Lecuit M, Lledo PM, Changeux JP, Bourhy H, , Attenuation of clinical and immunological outcomes during SARS-CoV-2 infection by ivermectin., EMBO Mol Med 2021 Aug; 13(8): e14122.
• 2021
  Rachez C, Legendre R, Costallat M, Varet H, Yi J, Kornobis E, Muchardt C, , HP1γ binding pre-mRNA intronic repeats modulates RNA splicing decisions., EMBO Rep 2021 Jul; (): e52320.
• 2021
  Batsché E, Yi J, Mauger O, Kornobis E, Hopkins B, Hanmer-Lloyd C, Muchardt C, , CD44 alternative splicing senses intragenic DNA methylation in tumors via direct and indirect mechanisms., Nucleic Acids Res 2021 Jun; (): .
• 2021
  de Melo GD, Lazarini F, Levallois S, Hautefort C, Michel V, Larrous F, Verillaud B, Aparicio C, Wagner S, Gheusi G, Kergoat L, Kornobis E, Donati F, Cokelaer T, Hervochon R, Madec Y, Roze E, Salmon D, Bourhy H, Lecuit M, Lledo PM, , COVID-19-related anosmia is associated with viral persistence and inflammation in human olfactory epithelium and brain infection in hamsters., Sci Transl Med 2021 Jun; 13(596): .
• 2021
  Municio C, Antosz W, Grasser KD, Kornobis E, Van Bel M, Eguinoa I, Coppens F, Bräutigam A, Lermontova I, Bruckmann A, Zelkowska K, Houben A, Schubert V, , The Arabidopsis condensin CAP-D subunits arrange interphase chromatin., New Phytol 2021 05; 230(3): 972-987.
• 2021
  Tejada-Arranz A, Matos RG, Quentin Y, Bouilloux-Lafont M, Galtier E, Briolat V, Kornobis E, Douché T, Matondo M, Arraiano CM, Raynal B, De Reuse H, , RNase R is associated in a functional complex with the RhpA DEAD-box RNA helicase in Helicobacter pylori., Nucleic Acids Res 2021 49:5249-5264.
• 2021
  Mournetas V, Massouridès E, Dupont JB, Kornobis E, Polvèche H, Jarrige M, Dorval ARL, Gosselin MRF, Manousopoulou A, Garbis SD, Górecki DC, Pinset C, , Myogenesis modelled by human pluripotent stem cells: a multi-omic study of Duchenne myopathy early onset., J Cachexia Sarcopenia Muscle 2021 02; 12(1): 209-232.
• 2021
  Huot N, Rascle P, Planchais C, Contreras V, Passaes C, Le Grand R, Beignon AS, Kornobis E, Legendre R, Varet H, Saez-Cirion A, Mouquet H, Jacquelin B, Müller-Trutwin M, , CD32+CD4+ T Cells Sharing B Cell Properties Increase With Simian Immunodeficiency Virus Replication in Lymphoid Tissues., Front Immunol 2021 ; 12(): 695148.
• 2020
  Székely R, Rengifo-Gonzalez M, Singh V, Riabova O, Benjak A, Piton J, Cimino M, Kornobis E, Mizrahi V, Johnsson K, Manina G, Makarov V, Cole ST, , 6,11-Dioxobenzo[f]pyrido[1,2-a]indoles Kill Mycobacterium tuberculosis by Targeting Iron-Sulfur Protein Rv0338c (IspQ), A Putative Redox Sensor., ACS Infect Dis 2020 11; 6(11): 3015-3025.
• 2019
  Azébi S, Batsché E, Michel F, Kornobis E, Muchardt C, Expression of endogenous retroviruses reflects increased usage of atypical enhancers in T cells, EMBO J. 2019 May;.
• 2019
  Torres-Sánchez M, Creevey CJ, Kornobis E, Gower DJ, Wilkinson M, San Mauro D, Multi-tissue transcriptomes of caecilian amphibians highlight incomplete knowledge of vertebrate gene families, DNA Res. 2019;26(1):13-20.
• 2018
  Abolins-Abols M, Kornobis E, Ribeca P, Wakamatsu K, Peterson MP, Ketterson ED, Milá B, Differential gene regulation underlies variation in melanic plumage coloration in the dark-eyed junco (Junco hyemalis), Mol. Ecol. 2018 Sep;.
• 2018
  Björn Grüning, Ryan Dale, Andreas Sjödin, Brad A. Chapman, Jillian Rowe, Christopher H. Tomkins-Tinch, Renan Valieris, Johannes Köster and The Bioconda Team, Bioconda: sustainable and comprehensive software distribution for the life sciences, Nature Methods 2018; 15(7):475-6.
• 2017
  Gudmundsdóttir R, Kornobis E, Kristjánsson BK, Pálsson S, Genetic analysis of ciliates living on the groundwater amphipod Crangonyx islandicus (Amphipoda: Crangonyctidae), Acta Zoologica; 99(2):188-198.
• 2015
  Kornobis E, Cabellos L, Aguilar F, Frías-López C, Rozas J, Marco J, Zardoya R, TRUFA: A User-Friendly Web Server for de novo RNA-seq Analysis Using Cluster Computing, Evol. Bioinform. Online 2015;11:97-104.
• 2013
  Kornobis E, Pálsson S, The ITS region of groundwater amphipods: length, secondary structure and phylogenetic information content in Crangonyctoids and Niphargids, Journal of Zoological Systematics and Evolutionary Research 2013; 51 (1), 19-28.
• 2012
  Kornobis E, Pálsson S, Svavarsson J, Classification of Crangonyx islandicus (Amphipoda, Crangonyctidae) based on morphological characters and comparison with molecular phylogenies, Zootaxa 3233 (1), 52-66.
• 2011
  Kornobis E, Pálsson S, Discordance in variation of the ITS region and the mitochondrial COI gene in the subterranean amphipod Crangonyx islandicus, J. Mol. Evol. 2011 Aug;73(1-2):34-44.
• 2010
  Kornobis E, Pálsson S, Sidorov DA, Holsinger JR, Kristjánsson BK, Molecular taxonomy and phylogenetic affinities of two groundwater amphipods, Crangonyx islandicus and Crymostygius thingvallensis, endemic to Iceland, Mol. Phylogenet. Evol. 2011 Mar;58(3):527-39.
• 2010
  Kornobis E, Pálsson S, Kristjánsson BK, Svavarsson J, Molecular evidence of the survival of subterranean amphipods (Arthropoda) during Ice Age underneath glaciers in Iceland, Mol. Ecol. 2010 Jun;19(12):2516-30.
• 2009
  Agnese JF, Brummett R, Caminade P, Catalan J, Kornobis E, Genetic characterization of the Aphyosemion calliurum species group and description of a new species from this assemblage: A. campomaanense (Cyprinodontiformes: Aplocheiloidei: Nothobranchiidae) from Southern Cameroon, Zootaxa 3233 (1), 52-66.