• 2025
  Ravneet Kaur Sidhu, Guillem Mas Fiol, Pierre Lê-Bury, Christian E Demeure, Emelyne Bougit, Rémi Beau, Charlotte Balière, Aurelia Kwasiborski, Valérie Caro, Jennifer Klunk, Daniel J Salkeld, Ann Carmichael, Nükhet Varlık, Debi Poinar, David J D Earn, Benjamin M Bolker, Jonathan Dushoff, G Brian Golding, Nicolas Rascovan, Olivier Dussurget, Edward C Holmes, Javier Pizarro-Cerdá, Hendrik N Poinar, Attenuation of virulence in Yersinia pestis across three plague pandemics, Science, 2025, 388 (6750), pp.eadt3880. ⟨10.1126/science.adt3880⟩.
• 2024
  Andrianaivoarimanana V, Savin C, Birdsell DN, Vogler AJ, Le Guern AS, Rahajandraibe S, Brémont S, Rahelinirina S, Sahl JW, Ramasindrazana B, Rakotonanahary RJL, Rakotomanana F, Randremanana R, Maheriniaina V, Razafimbia V, Kwasiborski A, Balière C, Ratsitorahina M, Baril L, Keim P, Caro V, Rasolofo V, Spiegel A, Pizarro-Cerda J, Wagner DM, Rajerison M, Multiple Introductions of Yersinia pestis during Urban Pneumonic Plague Epidemic, Madagascar, 2017., Emerg Infect Dis 2024 Feb; 30(2): 289-298.
• 2024
  Kwasiborski A, Hourdel V, Balière C, Hoinard D, Grassin Q, Feher M, De La Porte Des Vaux C, Cresta M, Vanhomwegen J, Manuguerra J-C, Batéjat C, Caro V, Direct metagenomic and amplicon-based Nanopore sequencing of French human monkeypox from clinical specimen., Microbiol Resour Announc 2024 Jan; 13(1): e0081123.
• 2023
  Balière C, Hourdel V, Kwasiborski A, Grassin Q, Feher M, Hoinard D, Vanhomwegen J, Taieb F, Consigny PH, Manuguerra JC, Leclercq I, Batéjat C, Caro V, Complete Genome Sequences of Monkeypox Virus from a French Clinical Sample and the Corresponding Isolated Strain, Obtained Using Nanopore Sequencing., Microbiol Resour Announc 2023 Apr; 12(4): e0000923.
• 2022
  Vandenbogaert M, Kwasiborski A, Gonofio E, Descorps-Declère S, Selekon B, Nkili Meyong AA, Ouilibona RS, Gessain A, Manuguerra JC, Caro V, Nakoune E, Berthet N, Nanopore sequencing of a monkeypox virus strain isolated from a pustular lesion in the Central African Republic., Sci Rep 2022 Jun; 12(1): 10768.
• 2021
  Fares W, Chouikha A, Ghedira K, Gdoura M, Rezig D, Boubaker SH, Dhifallah IB, Touzi H, Hammami W, Meddeb Z, Sadraoui A, Hogga N, Abouda I, Kwasiborski A, Hourdel V, Mikaty G, Caro V, Manuguerra JC, Alaya NB, Triki H, Whole genome sequencing and phylogenetic analysis of six SARS-CoV-2 strains isolated during COVID-19 pandemic in Tunisia, North Africa., BMC Genomics 2021 Jul; 22(1): 540.
• 2021
  Simo Tchetgna H, Descorps-Declère S, Selekon B, Kwasiborski A, Vandenbogaert M, Manuguerra JC, Gessain A, Caro V, Nakouné E, Berthet N, Molecular characterization of a new highly divergent Mobala related arenavirus isolated from Praomys sp. rodents., Sci Rep 2021 May; 11(1): 10188.
• 2021
  Vanhomwegen J, Kwasiborski A, Diop A, Boizeau L, Hoinard D, Vray M, Bercion R, Ndiaye B, Dublineau A, Michiyuki S, Manuguerra JC, Sauvage V, Candotti D, Seck A, Laperche S, Shimakawa Y, , Development and clinical validation of loop-mediated isothermal amplification (LAMP) assay to diagnose high HBV DNA levels in resource-limited settings., Clin Microbiol Infect 2021 Dec; 27(12): 1858.e9-1858.e15.
• 2021
  Borie R, Caro V, Nunes H, Kambouchner M, Cazes A, Antoine M, Crestani B, Leroy K, Copie-Bergman C, Kwasiborski A, Hennequin C, Vandenbogaert M, Hourdel V, Cadranel J, No evidence for a pathogen associated with pulmonary MALT lymphoma: a metagenomics investigation., Infect Agent Cancer 2021 Feb; 16(1): 10.
• 2020
  Sailleau C, Dumarest M, Vanhomwegen J, Delaplace M, Caro V, Kwasiborski A, Hourdel V, Chevaillier P, Barbarino A, Comtet L, Pourquier P, Klonjkowski B, Manuguerra JC, Zientara S, Le Poder S, First detection and genome sequencing of SARS-CoV-2 in an infected cat in France., Transbound Emerg Dis 2020 Nov; 67(6): 2324-2328.
• 2020
  Hourdel V, Kwasiborski A, Balière C, Matheus S, Batéjat CF, Manuguerra JC, Vanhomwegen J, Caro V, Rapid Genomic Characterization of SARS-CoV-2 by Direct Amplicon-Based Sequencing Through Comparison of MinION and Illumina iSeq100TM System., Front Microbiol 2020 ; 11(): 571328.
• 2017
  Magro L, Escadafal C, Garneret P, Jacquelin B, Kwasiborski A, Manuguerra JC, Monti F, Sakuntabhai A, Vanhomwegen J, Lafaye P, Tabeling P, Paper microfluidics for nucleic acid amplification testing (NAAT) of infectious diseases., Lab Chip 2017 Jul; 17(14): 2347-2371.