• 2022
  Bretagne S, Sitbon K, Desnos-Ollivier M, Garcia-Hermoso D, Letscher-Bru V, Cassaing S, Millon L, Morio F, Gangneux JP, Hasseine L, Favennec L, Cateau E, Bailly E, Moniot M, Bonhomme J, Desbois-Nogard N, Chouaki T, Paugam A, Bouteille B, Pihet M, Dalle F, Eloy O, Sasso M, Demar M, Mariani-Kurkdjian P, Robert V, Lortholary O, Dromer F, French Mycoses Study Group, , Active Surveillance Program to Increase Awareness on Invasive Fungal Diseases: the French RESSIF Network (2012 to 2018)., mBio 2022 May; (): e0092022.
• 2022
  Desnos-Ollivier M, Bretagne S, Lortholary O, Dromer F, , , Echinocandins Susceptibility Patterns of 2,787 Yeast Isolates: Importance of the Thresholds for the Detection of FKS Mutations., Antimicrob Agents Chemother 2022 Apr; (): e0172521.
• 2022
  Dellière S, Dudoignon E, Voicu S, Collet M, Fodil S, Plaud B, Chousterman B, Bretagne S, Azoulay E, Mebazaa A, Dépret F, Mégarbane B, Alanio A, , Combination of mycological criteria: a better surrogate to identify COVID-19 associated pulmonary aspergillosis patients and evaluate prognosis?, J Clin Microbiol 2022 Jan; (): JCM0216921.
• 2021
  Serris A, Benzakoun J, Danion F, Porcher R, Sonneville R, Wolff M, Kremer S, Letscher-Bru V, Fekkar A, Hekimian G, Pourcher V, Bougnoux ME, Poirée S, Ader F, Persat F, Cotton F, Tattevin P, Gangneux JP, Lelièvre L, Cassaing S, Bonneville F, Houze S, Bretagne S, Herbrecht R, Lortholary O, Naggara O, Lanternier F, , , Cerebral aspergillosis in the era of new antifungals: The CEREALS national cohort study Nationwide CEREbral Aspergillosis Lesional study (CEREALS)., J Infect 2021 Nov; (): .
• 2021
  Bretagne S, Sitbon K, Botterel F, Dellière S, Letscher-Bru V, Chouaki T, Bellanger AP, Bonnal C, Fekkar A, Persat F, Costa D, Bourgeois N, Dalle F, Lussac-Sorton F, Paugam A, Cassaing S, Hasseine L, Huguenin A, Guennouni N, Mazars E, Le Gal S, Sasso M, Brun S, Cadot L, Cassagne C, Cateau E, Gangneux JP, Moniot M, Roux AL, Tournus C, Desbois-Nogard N, Le Coustumier A, Moquet O, Alanio A, Dromer F, , , COVID-19-Associated Pulmonary Aspergillosis, Fungemia, and Pneumocystosis in the Intensive Care Unit: a Retrospective Multicenter Observational Cohort during the First French Pandemic Wave., Microbiol Spectr 2021 Oct; (): e0113821.
• 2021
  Desnos-Ollivier M, Fekkar A, Bretagne S, , Earliest case of Candida auris infection imported in 2007 in Europe from India prior to the 2009 description in Japan., J Mycol Med 2021 Sep; 31(3): 101139.
• 2021
  Gits-Muselli M, Hamane S, Verillaud B, Cherpin E, Denis B, Bondeelle L, Touratier S, Alanio A, Garcia-Hermoso D, Bretagne S, , Different repartition of the cryptic species of black aspergilli according to the anatomical sites in human infections, in a French University hospital., Med Mycol 2021 May; (): .
• 2021
  Alanio A, Gits-Muselli M, Guigue N, Denis B, Bergeron A, Touratier S, Hamane S, Bretagne S, , Prospective comparison of (1,3)-beta-D-glucan detection using colorimetric and turbidimetric assays for diagnosing invasive fungal disease., Med Mycol 2021 Apr; (): .
• 2021
  Desnos-Ollivier M, Lortholary O, Bretagne S, Dromer F, , Azole Susceptibility Profiles of More than 9,000 Clinical Yeast Isolates Belonging to 40 Common and Rare Species., Antimicrob Agents Chemother 2021 05; 65(6): .
• 2021
  Alanio A, Gits-Muselli M, Lanternier F, Sturny-Leclère A, Benazra M, Hamane S, Rodrigues AM, Garcia-Hermoso D, Lortholary O, Dromer F, Bretagne S, , , Evaluation of a New Histoplasma spp. Quantitative RT-PCR Assay., J Mol Diagn 2021 Mar; (): .
• 2021
  Hamam J, Navellou JC, Bellanger AP, Bretagne S, Winiszewski H, Scherer E, Piton G, Millon L, , , New clinical algorithm including fungal biomarkers to better diagnose probable invasive pulmonary aspergillosis in ICU., Ann Intensive Care 2021 Mar; 11(1): 41.
• 2021
  Wong SSW, Venugopalan LP, Beaussart A, Karnam A, Mohammed MRS, Jayapal JM, Bretagne S, Bayry J, Prajna L, Kuppamuthu D, Latgé JP, Aimanianda V, , Species-Specific Immunological Reactivities Depend on the Cell-Wall Organization of the Two Aspergillus, Aspergillus fumigatus and A. flavus., Front Cell Infect Microbiol 2021 ; 11(): 643312.
• 2021
  Bretagne S, Desnos-Ollivier M, Sitbon K, Lortholary O, Che D, Dromer F, and the French Mycoses Study group , No Impact of Fluconazole to Echinocandins Replacement as First-Line Therapy on the Epidemiology of Yeast Fungemia (Hospital-Driven Active Surveillance, 2004-2017, Paris, France)., Front Med (Lausanne) 2021 ; 8(): 641965.
• 2020
  Dellière S, Dudoignon E, Fodil S, Voicu S, Collet M, Oillic PA, Salmona M, Dépret F, Ghelfenstein-Ferreira T, Plaud B, Chousterman B, Bretagne S, Azoulay E, Mebazaa A, Megarbane B, Alanio A, , Risk factors associated with COVID-19-associated pulmonary aspergillosis in ICU patients: a French multicentric retrospective cohort., Clin Microbiol Infect 2020 Dec; (): .
• 2020
  Garcia-Hermoso D, Hamane S, Fekkar A, Jabet A, Denis B, Siguier M, Galeazzi G, Haddad E, Brun S, Vidal V, Nevez G, Le Berre R, Gits-Muselli M, Lanternier F, Bretagne S, , Invasive Infections with Nannizziopsis obscura Species Complex in 9 Patients from West Africa, France, 2004-20201., Emerg Infect Dis 2020 09; 26(9): .
• 2020
  Alanio A, Olivi M, Cabaret O, Foulet F, Bellanger AP, Millon L, Berceanu A, Cordonnier C, Costa JM, Bretagne S, , Correlation Between Pneumocystis jirovecii Mitochondrial Genotypes and High and Low Fungal Loads Assessed by Single Nucleotide Primer Extension Assay and Quantitative Real-Time PCR., J. Eukaryot. Microbiol. ; 62(5): 650-6.
• 2020
  Ghelfenstein-Ferreira T, Gits-Muselli M, Dellière S, Denis B, Guigue N, Hamane S, Alanio A, Bretagne S, , Entamoeba histolytica DNA Detection in Serum of Suspected Amoebic Liver Abscess., J. Clin. Microbiol. 2020 Aug; (): .
• 2020
  Gits-Muselli M, White PL, Mengoli C, Chen S, Crowley B, Dingemans G, Fréalle E, L Gorton R, Guiver M, Hagen F, Halliday C, Johnson G, Lagrou K, Lengerova M, Melchers WJG, Novak-Frazer L, Rautemaa-Richardson R, Scherer E, Steinmann J, Cruciani M, Barnes R, Donnelly JP, Loeffler J, Bretagne S, Alanio A, , The Fungal PCR Initiative’s evaluation of in-house and commercial Pneumocystis jirovecii qPCR assays: Toward a standard for a diagnostics assay., Med. Mycol. 2020 Aug; 58(6): 779-788.
• 2020
  Gits-Muselli M, Campagne P, Desnos-Ollivier M, Le Pape P, Bretagne S, Morio F, Alanio A, , Comparison of MultiLocus Sequence Typing (MLST) and Microsatellite Length Polymorphism (MLP) for Pneumocystis jirovecii genotyping., Comput Struct Biotechnol J 2020 ; 18(): 2890-2896.
• 2019
  Xhaard A, Porcher R, Bergeron A, Alanio A, Touratier S, Bretagne S, de Margerie-Mellon C, Sicre de Fontbrune F, Itzykson R, Coman T, Robin M, Cabannes-Hamy A, Socié G, Peffault de Latour R, , Primary antifungal prophylaxis with micafungin after allogeneic hematopoietic stem cell transplantation: a monocentric prospective study., Ann. Hematol. 2019 Apr; 98(4): 1033-1035.
• 2019
  Dudoignon E, Alanio A, Anstey J, Depret F, Coutrot M, Fratani A, Jully M, Cupaciu A, Chaussard M, Oueslati H, Ferry A, Benyamina M, de Tymowski C, Boccara D, Serror K, Chaouat M, Mimoun M, Lafaurie M, Denis B, Gits-Muselli M, Bretagne S, Mebazaa A, Legrand M, Soussi S, , , Outcome and potentially modifiable risk factors for candidemia in critically ill burns patients: A matched cohort study., Mycoses 2019 Mar; 62(3): 237-246.
• 2019
  Desnos-Ollivier M, Bretagne S, Boullié A, Gautier C, Dromer F, Lortholary O, , Isavuconazole MIC distribution of 29 yeast species responsible for invasive infections (2015-2017), Clin. Microbiol. Infect. 2019 May;25(5):634.e1-634.e4.
• 2018
  Robin C, Cordonnier C, Sitbon K, Raus N, Lortholary O, Maury S, Peffault de la Tour R, Bretagne S, Bastuji-Garin S, , Mainly Post-Transplant Factors Are Associated with Invasive Aspergillosis after Allogeneic Stem Cell Transplantation: A Study from the Surveillance des Aspergilloses Invasives en France and Société Francophone de Greffe de Moelle et de Thérapie Cellulaire, Biol. Blood Marrow Transplant. 2019 Feb;25(2):354-361.
• 2018
  Pilmis B, Garcia-Hermoso D, Alanio A, Catherinot E, Scemla A, Jullien V, Bretagne S, Lortholary O, , Failure of voriconazole therapy due to acquired azole resistance in Aspergillus fumigatus in a kidney transplant recipient with chronic necrotizing aspergillosis., Am. J. Transplant. 2018 09; 18(9): 2352-2355.
• 2018
  Colley T, Sehra G, Chowdhary A, Alanio A, Kelly SL, Kizawa Y, Armstrong-James D, Fisher MC, Warrilow AGS, Parker JE, Kelly DE, Kimura G, Nishimoto Y, Sunose M, Onions S, Crepin D, Lagasse F, Crittall M, Shannon J, McConville M, King-Underwood J, Naylor A, Bretagne S, Murray J, Ito K, Strong P, Rapeport G, , In Vitro and In Vivo Efficacy of a Novel and Long-Acting Fungicidal Azole, PC1244, on Aspergillus fumigatus Infection., Antimicrob. Agents Chemother. 2018 05; 62(5): .
• 2018
  Garcia-Hermoso D, Criscuolo A, Lee SC, Legrand M, Chaouat M, Denis B, Lafaurie M, Rouveau M, Soler C, Schaal JV, Mimoun M, Mebazaa A, Heitman J, Dromer F, Brisse S, Bretagne S, Alanio A, , Outbreak of Invasive Wound Mucormycosis in a Burn Unit Due to Multiple Strains of Mucor circinelloides f. circinelloides Resolved by Whole-Genome Sequencing., mBio 2018 04; 9(2): .
• 2018
  Thomas E, Bertolotti A, Barreau A, Klisnick J, Tournebize P, Borgherini G, Zemali N, Jaubert J, Jouvion G, Bretagne S, Picot S, From phaeohyphomycosis to disseminated chromoblastomycosis: A retrospective study of infections caused by dematiaceous fungi, Med Mal Infect 2018 Jun;48(4):278-285.
• 2017
  Desnos-Ollivier M, Bórmida V, Poirier P, Nourrisson C, Pan D, Bretagne S, Puime A, Dromer F, , , Population Structure of Candida parapsilosis: No Genetic Difference Between French and Uruguayan Isolates Using Microsatellite Length Polymorphism, Mycopathologia 2018 Apr;183(2):381-390.
• 2017
  Menotti J, Alanio A, Sturny-Leclère A, Vitry S, Sauvage F, Barratt G, Bretagne S, , A cell impedance-based real-time in vitro assay to assess the toxicity of amphotericin B formulations., Toxicol. Appl. Pharmacol. 2017 11; 334(): 18-23.
• 2017
  Gits-Muselli M, Benderdouche M, Hamane S, Mingui A, Feuilhade de Chauvin M, Guigue N, Picat MQ, Bourrat E, Petit A, Bagot M, Alanio A, Bretagne S, , Continuous increase of Trichophyton tonsurans as a cause of tinea capitis in the urban area of Paris, France: a 5-year-long study., Med. Mycol. 2017 Jul; 55(5): 476-484.
• 2017
  Colley T, Alanio A, Kelly SL, Sehra G, Kizawa Y, Warrilow AGS, Parker JE, Kelly DE, Kimura G, Anderson-Dring L, Nakaoki T, Sunose M, Onions S, Crepin D, Lagasse F, Crittall M, Shannon J, Cooke M, Bretagne S, King-Underwood J, Murray J, Ito K, Strong P, Rapeport G, , In Vitro and In Vivo Antifungal Profile of a Novel and Long-Acting Inhaled Azole, PC945, on Aspergillus fumigatus Infection., Antimicrob. Agents Chemother. 2017 05; 61(5): .
• 2017
  Cordonnier C, Alanio A, Cesaro S, Maschmeyer G, Einsele H, Donnelly JP, Hauser PM, Lagrou K, Melchers WJ, Helweg-Larsen J, Matos O, Bretagne S, Maertens J, , , , Pneumocystis jirovecii pneumonia: still a concern in patients with haematological malignancies and stem cell transplant recipients-authors’ response., J. Antimicrob. Chemother. 2017 04; 72(4): 1266-1268.
• 2017
  Lortholary O, Renaudat C, Sitbon K, Desnos-Ollivier M, Bretagne S, Dromer F, French Mycoses Study Group, The risk and clinical outcome of candidemia depending on underlying malignancy, Intensive Care Med 2017 May;43(5):652-662.
• 2017
  Bretagne S, Renaudat C, Desnos-Ollivier M, Sitbon K, Lortholary O, Dromer F, French Mycoses Study Group, Predisposing factors and outcome of uncommon yeast species-related fungaemia based on an exhaustive surveillance programme (2002-14), J. Antimicrob. Chemother. 2017 Jun 1;72(6):1784-1793.
• 2017
  Alanio A, Bretagne S, , Performance evaluation of multiplex PCR including Aspergillus-not so simple!, Med. Mycol. 2017 Jan; 55(1): 56-62.
• 2016
  Legrand M, Gits-Muselli M, Boutin L, Garcia-Hermoso D, Maurel V, Soussi S, Benyamina M, Ferry A, Chaussard M, Hamane S, Denis B, Touratier S, Guigue N, Fréalle E, Jeanne M, Shaal JV, Soler C, Mimoun M, Chaouat M, Lafaurie M, Mebazaa A, Bretagne S, Alanio A, , Detection of Circulating Mucorales DNA in Critically Ill Burn Patients: Preliminary Report of a Screening Strategy for Early Diagnosis and Treatment., Clin. Infect. Dis. 2016 Nov; 63(10): 1312-1317.
• 2016
  Millon L, Herbrecht R, Grenouillet F, Morio F, Alanio A, Letscher-Bru V, Cassaing S, Chouaki T, Kauffmann-Lacroix C, Poirier P, Toubas D, Augereau O, Rocchi S, Garcia-Hermoso D, Bretagne S, , , Early diagnosis and monitoring of mucormycosis by detection of circulating DNA in serum: retrospective analysis of 44 cases collected through the French Surveillance Network of Invasive Fungal Infections (RESSIF)., Clin. Microbiol. Infect. 2016 Sep; 22(9): 810.e1-810.e8.
• 2016
  Alanio A, Denis B, Hamane S, Raffoux E, Peffault de la Tour R, Touratier S, Bergeron A, Bretagne S, , New therapeutic strategies for invasive aspergillosis in the era of azole resistance: how should the prevalence of azole resistance be defined?, J. Antimicrob. Chemother. 2016 08; 71(8): 2075-8.
• 2016
  Alanio A, Sturny-Leclère A, Benabou M, Guigue N, Bretagne S, , Variation in copy number of the 28S rDNA of Aspergillus fumigatus measured by droplet digital PCR and analog quantitative real-time PCR., J. Microbiol. Methods 2016 08; 127(): 160-163.
• 2016
  Garcia-Hermoso D, Desnos-Ollivier M, Bretagne S, Typing Candida Species Using Microsatellite Length Polymorphism and Multilocus Sequence Typing, Methods Mol. Biol. 2016;1356:199-214.
• 2016
  Alanio A, Gits-Muselli M, Mercier-Delarue S, Dromer F, Bretagne S, , Diversity of Pneumocystis jirovecii during Infection Revealed by Ultra-Deep Pyrosequencing., Front Microbiol 2016 ; 7(): 733.
• 2016
  Dellière S, Healey K, Gits-Muselli M, Carrara B, Barbaro A, Guigue N, Lecefel C, Touratier S, Desnos-Ollivier M, Perlin DS, Bretagne S, Alanio A, , Fluconazole and Echinocandin Resistance of Candida glabrata Correlates Better with Antifungal Drug Exposure Rather than with MSH2 Mutator Genotype in a French Cohort of Patients Harboring Low Rates of Resistance., Front Microbiol 2016 ; 7(): 2038.
• 2016
  Valero C, Buitrago MJ, Gits-Muselli M, Benazra M, Sturny-Leclère A, Hamane S, Guigue N, Bretagne S, Alanio A, , Copy Number Variation of Mitochondrial DNA Genes in Pneumocystis jirovecii According to the Fungal Load in BAL Specimens., Front Microbiol 2016 ; 7(): 1413.
• 2015
  Cazorla A, Alanio A, Bretagne S, Polivka M, Shaar-Chneker C, Kaci R, Brouland JP, Chrétien F, Jouvion G, , [Cryptococcus where they are not expected: Five case reports of extra-cerebral and extra-pulmonary cryptococcosis]., Ann Pathol 2015 Dec; 35(6): 479-85.
• 2015
  Alanio A, Garcia-Hermoso D, Criscuolo A, Legrand M, Chaouat M, Denis B, Lafaurie M, Rouveau M, Soler C, Mimoun M, Mebazaa A, Dromer F, Brisse S, Bretagne S, Whole genome sequencing to investigate an outbreak of mucormycosis in a burn unit, Mycoses 2015 Oct;58(S4):23-23.
• 2015
  Garcia-Hermoso D, Alanio A, Cabaret O, Olivi M, Foulet F, Cordonnier C, Costa JM, Bretagne S, , High diversity of non-sporulating moulds in respiratory specimens of immunocompromised patients: should all the species be reported when diagnosing invasive aspergillosis?, Mycoses 2015 Sep; 58(9): 557-64.
• 2015
  Rammaert B, Jouvion G, de Chaumont F, Garcia-Hermoso D, Szczepaniak C, Renaudat C, Olivo-Marin JC, Chrétien F, Dromer F, Bretagne S, , Absence of Fungal Spore Internalization by Bronchial Epithelium in Mouse Models Evidenced by a New Bioimaging Approach and Transmission Electronic Microscopy., Am J Pathol 2015 Sep; 185(9): 2421-30.
• 2015
  D Garcia-Hermoso, A Criscuolo, M Legrande, M Chaouat, B Denis, M Lafaurie, M Rouveau, C Soler, M Mimoun, A Mebazaa, F Dromer, S Brisse, S Bretagne, A Alanio, Épidémie de mucormycose dans un centre de traitement des brûlés : des biomarqueurs diagnostiques au séquençage complets des souches, J. Myc. Med. 2015 Sep; 25(3):219.
• 2015
  Bernardeschi C, Foulet F, Ingen-Housz-Oro S, Ortonne N, Sitbon K, Quereux G, Lortholary O, Chosidow O, Bretagne S,, Cutaneous Invasive Aspergillosis: Retrospective Multicenter Study of the French Invasive-Aspergillosis Registry and Literature Review, Medicine (Baltimore) 2015 Jul;94(26):e1018.
• 2015
  White PL, Wingard JR, Bretagne S, Löffler J, Patterson TF, Slavin MA, Barnes RA, Pappas PG, Donnelly JP, Aspergillus Polymerase Chain Reaction: Systematic Review of Evidence for Clinical Use in Comparison With Antigen Testing, Clin. Infect. Dis. 2015 Jun;.
• 2015
  White PL, Barnes RA, Springer J, Klingspor L, Cuenca-Estrella M, Morton CO, Lagrou K, Bretagne S, Melchers WJ, Mengoli C, Donnelly JP, Heinz WJ, Loeffler J, Clinical Performance of Aspergillus PCR for Testing Serum and Plasma: a Study by the European Aspergillus PCR Initiative, J. Clin. Microbiol. 2015 Sep;53(9):2832-7.
• 2015
  Loeffler J, Mengoli C, Springer J, Bretagne S, Cuenca-Estrella M, Klingspor L, Lagrou K, Melchers WJ, Morton CO, Barnes RA, Donnelly JP, White PL, Analytical Comparison of In Vitro-Spiked Human Serum and Plasma for PCR-Based Detection of Aspergillus fumigatus DNA: a Study by the European Aspergillus PCR Initiative, J. Clin. Microbiol. 2015 Sep;53(9):2838-45.
• 2015
  Desnos-Ollivier M, Patel S, Raoux-Barbot D, Heitman J, Dromer F, , Cryptococcosis Serotypes Impact Outcome and Provide Evidence of Cryptococcus neoformans Speciation, MBio 2015 Jun;6(3):e00311.
• 2015
  Colombier MA, Alanio A, Denis B, Melica G, Garcia-Hermoso D, Levy B, Peraldi MN, Glotz D, Bretagne S, Gallien S, , Dual Invasive Infection with Phaeoacremonium parasiticum and Paraconiothyrium cyclothyrioides in a Renal Transplant Recipient: Case Report and Comprehensive Review of the Literature of Phaeoacremonium Phaeohyphomycosis., J. Clin. Microbiol. 2015 Jul; 53(7): 2084-94.
• 2015
  Guigue N, Lardeux S, Alanio A, Hamane S, Tabouret M, Bretagne S, , Importance of operational factors in the reproducibility of Aspergillus galactomannan enzyme immune assay., PLoS ONE 2015 ; 10(4): e0124044.
• 2015
  Lelievre L, Garcia-Hermoso D, Abdoul H, Hivelin M, Chouaki T, Toubas D, Mamez AC, Lantieri L, Lortholary O, Lanternier F,, Posttraumatic mucormycosis: a nationwide study in France and review of the literature, Medicine (Baltimore) 2014 Nov;93(24):395-404.
• 2014
  Lortholary O, Renaudat C, Sitbon K, Madec Y, Denoeud-Ndam L, Wolff M, Fontanet A, Bretagne S, Dromer F, , Worrisome trends in incidence and mortality of candidemia in intensive care units (Paris area, 2002-2010), Intensive Care Med 2014 Sep;40(9):1303-12.
• 2014
  Lerolle N, Raffoux E, Socie G, Touratier S, Sauvageon H, Porcher R, Bretagne S, Bergeron A, Azoulay E, Molina JM, Lafaurie M, Breakthrough invasive fungal disease in patients receiving posaconazole primary prophylaxis: a 4-year study, Clin. Microbiol. Infect. 2014 Nov;20(11):O952-9.
• 2014
  Alanio A, Bretagne S, , Difficulties with molecular diagnostic tests for mould and yeast infections: where do we stand?, Clin. Microbiol. Infect. 2014 Jun; 20 Suppl 6(): 36-41.
• 2014
  Paugam A, Ancelle T, Lortholary O, Bretagne S, , Longer incubation times for yeast fungemia: importance for presumptive treatment, Diagn. Microbiol. Infect. Dis. 2014 Oct;80(2):119-21.
• 2014
  de Fontbrune FS, Denis B, Meunier M, Garcia-Hermoso D, Bretagne S, Alanio A, Iterative breakthrough invasive aspergillosis due to TR(34) /L98H azole-resistant Aspergillus fumigatus and Emericella sublata in a single hematopoietic stem cell transplant patient, Transpl Infect Dis 2014 Aug;16(4):687-91.
• 2014
  Rocchi S, Daguindau E, Grenouillet F, Deconinck E, Bellanger AP, Garcia-Hermoso D, Bretagne S, Reboux G, Millon L, Azole-resistant Aspergillus fumigatus isolate with the TR34/L98H mutation in both a fungicide-sprayed field and the lung of a hematopoietic stem cell transplant recipient with invasive aspergillosis, J. Clin. Microbiol. 2014 May;52(5):1724-6.
• 2014
  Cordonnier C, Robin C, Alanio A, Bretagne S, Antifungal pre-emptive strategy for high-risk neutropenic patients: why the story is still ongoing, Clin. Microbiol. Infect. 2014 Jun;20 Suppl 6:27-35.
• 2013
  Costa JM, Alanio A, Moukoury S, Clairet V, Debruyne M, Poveda JD, Bretagne S, , Direct genotyping of Toxoplasma gondii from amniotic fluids based on B1 gene polymorphism using minisequencing analysis., BMC Infect. Dis. 2013 Nov; 13(): 552.
• 2013
  Lanternier F, Tubach F, Ravaud P, Salmon D, Dellamonica P, Bretagne S, Couret M, Bouvard B, Debandt M, Gueit I, Gendre JP, Leone J, Nicolas N, Che D, Mariette X, Lortholary O, , Incidence and risk factors of Legionella pneumophila pneumonia during anti-tumor necrosis factor therapy: a prospective French study, Chest 2013 Sep;144(3):990-8.
• 2013
  Loulergue P, Tubach F, Salmon D, Dellamonica P, Taillan B, Thorel JB, Marteau P, Bressot C, Ravaud P, Mariette X, Lortholary O, , Bacteremia in patients receiving TNF-alpha antagonists–a prospective multicenter study, J. Infect. 2013 Dec;67(6):524-8.
• 2013
  Schwarzinger M, Sagaon-Teyssier L, Cabaret O, Bretagne S, Cordonnier C, , Performance of serum biomarkers for the early detection of invasive aspergillosis in febrile, neutropenic patients: a multi-state model, PLoS ONE 2013;8(6):e65776.
• 2013
  Cabaret O, Puel O, Botterel F, Delaforge M, Bretagne S, Metabolic detoxification pathways for 5-methoxy-sterigmatocystin in primary tracheal epithelial cells, Xenobiotica 2014 Jan;44(1):1-9.
• 2013
  Saliba F, Delvart V, Ichaï P, Kassis N, Botterel F, Mihaila L, Azoulay D, Adam R, Castaing D, Bretagne S, Samuel D, Fungal infections after liver transplantation: outcomes and risk factors revisited in the MELD era, Clin Transplant 2013 Jul-Aug;27(4):E454-61.
• 2013
  Lyon GM, Abdul-Ali D, Loeffler J, White PL, Wickes B, Herrera ML, Alexander BD, Baden LR, Clancy C, Denning D, Nguyen MH, Sugrue M, Wheat LJ, Wingard JR, Donnelly JP, Barnes R, Patterson TF, Caliendo AM, , Development and evaluation of a calibrator material for nucleic acid-based assays for diagnosing aspergillosis, J. Clin. Microbiol. 2013 Jul;51(7):2403-5.
• 2013
  Rivière S, Lortholary O, Michon J, Bougnoux ME, Mainardi JL, Sendid B, Bretagne S, Lefort A, Aspergillus endocarditis in the era of new antifungals: major role for antigen detection, J. Infect. 2013 Jul;67(1):85-8.
• 2012
  Pautas C, Sbidian E, Hicheri Y, Bastuji-Garin S, Bretagne S, Corbel C, Gregoire L, Maury S, Merabet L, Cordonnier C, Cambau E, A new workflow for the microbiological diagnosis of febrile neutropenia in patients with a central venous catheter, J. Antimicrob. Chemother. 2013 Apr;68(4):943-6.
• 2012
  Carlet J, Rambaud C, Pulcini C, , [Alliance against MDRO: safeguarding antibiotics], Ann Fr Anesth Reanim 2012 Sep;31(9):704-8.
• 2012
  Fauvel M, Farrugia C, Tsapis N, Gueutin C, Cabaret O, Bories C, Bretagne S, Barratt G, Aerosolized liposomal amphotericin B: prediction of lung deposition, in vitro uptake and cytotoxicity, Int J Pharm 2012 Oct;436(1-2):106-10.
• 2012
  Saliba F, Delvart V, Ichaï P, Kassis N, Botterel F, Mihaila L, Azoulay D, Adam R, Castaing D, Bretagne S, Samuel D, Outcomes associated with amphotericin B lipid complex (ABLC) prophylaxis in high-risk liver transplant patients, Med. Mycol. 2013 Feb;51(2):155-63.
• 2012
  Alanio A, Cabaret O, Sitterlé E, Costa JM, Brisse S, Cordonnier C, Bretagne S, , Azole preexposure affects the Aspergillus fumigatus population in patients., Antimicrob. Agents Chemother. 2012 Sep; 56(9): 4948-50.
• 2012
  Bamba S, Lortholary O, Sawadogo A, Millogo A, Guiguemdé RT, Bretagne S, Decreasing incidence of cryptococcal meningitis in West Africa in the era of highly active antiretroviral therapy, AIDS 2012 May;26(8):1039-41.
• 2012
  Morio F, Aubin GG, Danner-Boucher I, Haloun A, Sacchetto E, Garcia-Hermoso D, Bretagne S, Miegeville M, Le Pape P, High prevalence of triazole resistance in Aspergillus fumigatus, especially mediated by TR/L98H, in a French cohort of patients with cystic fibrosis, J. Antimicrob. Chemother. 2012 Aug;67(8):1870-3.
• 2012
  Costa JM, Botterel F, Cabaret O, Foulet F, Cordonnier C, Bretagne S, Association between circulating DNA, serum (1->3)-β-D-glucan, and pulmonary fungal burden in Pneumocystis pneumonia, Clin. Infect. Dis. 2012 Jul;55(2):e5-8.
• 2012
  Ben Abdeljelil J, Saghrouni F, Cabaret O, Boukadida J, Bretagne S, Ben Saïd M, Temporal similarity between Candida albicans genotypes in a Tunisian neonatal intensive care unit suggests several nosocomial cross-contamination episodes, DNA Cell Biol. 2012 Jul;31(7):1161-6.
• 2012
  Lefort A, Chartier L, Sendid B, Wolff M, Mainardi JL, Podglajen I, Desnos-Ollivier M, Fontanet A, Bretagne S, Lortholary O,, Diagnosis, management and outcome of Candida endocarditis, Clin. Microbiol. Infect. 2012 Apr;18(4):E99-E109.
• 2012
  Lanternier F, Dannaoui E, Morizot G, Elie C, Garcia-Hermoso D, Huerre M, Bitar D, Dromer F, Lortholary O,, A global analysis of mucormycosis in France: the RetroZygo Study (2005-2007), Clin. Infect. Dis. 2012 Feb;54 Suppl 1:S35-43.
• 2012
  Costa JM, Bretagne S, Variation of B1 gene and AF146527 repeat element copy numbers according to Toxoplasma gondii strains assessed using real-time quantitative PCR, J. Clin. Microbiol. 2012 Apr;50(4):1452-4.
• 2012
  Dannaoui E, Desnos-Ollivier M, Garcia-Hermoso D, Grenouillet F, Cassaing S, Baixench MT, Bretagne S, Dromer F, Lortholary O, , Candida spp. with acquired echinocandin resistance, France, 2004-2010, Emerging Infect. Dis. 2012 Jan;18(1):86-90.
• 2011
  Botterel F, Cabaret O, Foulet F, Cordonnier C, Costa JM, Bretagne S, Clinical significance of quantifying Pneumocystis jirovecii DNA by using real-time PCR in bronchoalveolar lavage fluid from immunocompromised patients, J. Clin. Microbiol. 2012 Feb;50(2):227-31.
• 2011
  Peigne V, Dromer F, Elie C, Lidove O, Lortholary O,, Imported acquired immunodeficiency syndrome-related histoplasmosis in metropolitan France: a comparison of pre-highly active anti-retroviral therapy and highly active anti-retroviral therapy eras, Am. J. Trop. Med. Hyg. 2011 Nov;85(5):934-41.
• 2011
  Cabaret O, Puel O, Botterel F, Pean M, Bretagne S, Delaforge M, Contribution of uniformly 13C-enriched sterigmatocystin to the study of its pulmonary metabolism, Rapid Commun. Mass Spectrom. 2011 Oct;25(19):2704-10.
• 2011
  White PL, Mengoli C, Bretagne S, Cuenca-Estrella M, Finnstrom N, Klingspor L, Melchers WJ, McCulloch E, Barnes RA, Donnelly JP, Loeffler J, , Evaluation of Aspergillus PCR protocols for testing serum specimens, J. Clin. Microbiol. 2011 Nov;49(11):3842-8.
• 2011
  Marchetti O, Lamoth F, Mikulska M, Viscoli C, Verweij P, Bretagne S, , ECIL recommendations for the use of biological markers for the diagnosis of invasive fungal diseases in leukemic patients and hematopoietic SCT recipients, Bone Marrow Transplant. 2012 Jun;47(6):846-54.
• 2011
  Schmid J, Tortorano AM, Jones G, Lazzarini C, Zhang N, Bendall MJ, Cogliati M, Wattimena S, Klingspor L, , , Increased mortality in young candidemia patients associated with presence of a Candida albicans general-purpose genotype, J. Clin. Microbiol. 2011 Sep;49(9):3250-6.
• 2011
  Carlet J, , [Stop bacterial resistance: save antibiotics], Med Mal Infect 2011 Jul;41(7):351-2.
• 2011
  Costa JM, Cabaret O, Moukoury S, Bretagne S, Genotyping of the protozoan pathogen Toxoplasma gondii using high-resolution melting analysis of the repeated B1 gene, J. Microbiol. Methods 2011 Sep;86(3):357-63.
• 2011
  Bellanger AP, Millon L, Rognon B, Roussel S, Botterel F, Bretagne S, Reboux G, Variable beta-glucans production by different states of Eurotium amstelodami explains differences in inflammatory responses in airway cells, APMIS 2011 Sep;119(9):605-10.
• 2011
  Lortholary O, Gangneux JP, Sitbon K, Lebeau B, de Monbrison F, Le Strat Y, Coignard B, Dromer F, Bretagne S,, Epidemiological trends in invasive aspergillosis in France: the SAIF network (2005-2007), Clin. Microbiol. Infect. 2011 Dec;17(12):1882-9.
• 2011
  Farrugia C, Cabaret O, Botterel F, Bories C, Foulet F, Costa JM, Bretagne S, Cytochrome b gene quantitative PCR for diagnosing Plasmodium falciparum infection in travelers, J. Clin. Microbiol. 2011 Jun;49(6):2191-5.
• 2011
  Kazan E, Maertens J, Herbrecht R, Weisser M, Gachot B, Vekhoff A, Caillot D, Raffoux E, Fagot T, Reman O, Isnard F, Thiebaut A, Bretagne S, Cordonnier C, A retrospective series of gut aspergillosis in haematology patients, Clin. Microbiol. Infect. 2011 Apr;17(4):588-94.
• 2011
  Machmachi H, Godineau N, Develoux M, Bretagne S, Bazeli A, Amsellem D, Desnos-Ollivier M, Poirat JB, Black grain mycetoma caused by Leptosphaeria tompkinsii, Med. Mycol. 2011 Feb;49(2):186-9.
• 2010
  Salmon-Ceron D, Tubach F, Lortholary O, Chosidow O, Bretagne S, Nicolas N, Cuillerier E, Fautrel B, Michelet C, Morel J, Puéchal X, Wendling D, Lemann M, Ravaud P, Mariette X, , Drug-specific risk of non-tuberculosis opportunistic infections in patients receiving anti-TNF therapy reported to the 3-year prospective French RATIO registry, Ann. Rheum. Dis. 2011 Apr;70(4):616-23.
• 2010
  Mikulska M, Calandra T, Sanguinetti M, Poulain D, Viscoli C, , The use of mannan antigen and anti-mannan antibodies in the diagnosis of invasive candidiasis: recommendations from the Third European Conference on Infections in Leukemia, Crit Care 2010;14(6):R222.
• 2010
  Alanio A, Sitterlé E, Liance M, Farrugia C, Foulet F, Botterel F, Hicheri Y, Cordonnier C, Costa JM, Bretagne S, , Low prevalence of resistance to azoles in Aspergillus fumigatus in a French cohort of patients treated for haematological malignancies., J. Antimicrob. Chemother. 2011 Feb; 66(2): 371-4.
• 2010
  Dobigny G, Poirier P, Hima K, Cabaret O, Gauthier P, Tatard C, Costa JM, Bretagne S, Molecular survey of rodent-borne Trypanosoma in Niger with special emphasis on T. lewisi imported by invasive black rats, Acta Trop. 2011 Mar;117(3):183-8.
• 2010
  Lortholary O, Desnos-Ollivier M, Sitbon K, Fontanet A, Bretagne S, Dromer F, , Recent exposure to caspofungin or fluconazole influences the epidemiology of candidemia: a prospective multicenter study involving 2,441 patients, Antimicrob. Agents Chemother. 2011 Feb;55(2):532-8.
• 2010
  Even C, Bastuji-Garin S, Hicheri Y, Pautas C, Botterel F, Maury S, Cabanne L, Bretagne S, Cordonnier C, Impact of invasive fungal disease on the chemotherapy schedule and event-free survival in acute leukemia patients who survived fungal disease: a case-control study, Haematologica 2011 Feb;96(2):337-41.
• 2010
  Bretagne S, Advances and prospects for molecular diagnostics of fungal infections, Curr Infect Dis Rep 2010 Nov;12(6):430-6.
• 2010
  Bellanger AP, Reboux G, Botterel F, Candido C, Roussel S, Rognon B, Dalphin JC, Bretagne S, Millon L, New evidence of the involvement of Lichtheimia corymbifera in farmer’s lung disease, Med. Mycol. 2010 Nov;48(7):981-7.
• 2010
  Cabaret O, Toussain G, Abermil N, Alsamad IA, Botterel F, Costa JM, Papon JF, Bretagne S, Degradation of fungal DNA in formalin-fixed paraffin-embedded sinus fungal balls hampers reliable sequence-based identification of fungi, Med. Mycol. 2011 Apr;49(3):329-32.
• 2010
  Bruneel F, Tubach F, Corne P, Megarbane B, Mira JP, Peytel E, Camus C, Schortgen F, Azoulay E, Cohen Y, Georges H, Meybeck A, Hyvernat H, Trouillet JL, Frenoy E, Nicolet L, Roy C, Durand R, Le Bras J, Wolff M, , Severe imported falciparum malaria: a cohort study in 400 critically ill adults, PLoS ONE 2010;5(10):e13236.
• 2010
  Cabaret O, Puel O, Botterel F, Pean M, Khoufache K, Costa JM, Delaforge M, Bretagne S, Metabolic detoxication pathways for sterigmatocystin in primary tracheal epithelial cells, Chem. Res. Toxicol. 2010 Nov;23(11):1673-81.
• 2010
  White PL, Perry MD, Loeffler J, Melchers W, Klingspor L, Bretagne S, McCulloch E, Cuenca-Estrella M, Finnstrom N, Donnelly JP, Barnes RA, , Critical stages of extracting DNA from Aspergillus fumigatus in whole-blood specimens, J. Clin. Microbiol. 2010 Oct;48(10):3753-5.
• 2010
  Bretagne S, Primary diagnostic approaches of invasive aspergillosis–molecular testing, Med. Mycol. 2011 Apr;49 Suppl 1:S48-53.
• 2010
  Maertens J, Marchetti O, Herbrecht R, Cornely OA, Flückiger U, Frêre P, Gachot B, Heinz WJ, Lass-Flörl C, Ribaud P, Thiebaut A, Cordonnier C, , European guidelines for antifungal management in leukemia and hematopoietic stem cell transplant recipients: summary of the ECIL 3–2009 update, Bone Marrow Transplant. 2011 May;46(5):709-18.
• 2010
  Khoufache K, Cabaret O, Farrugia C, Rivollet D, Alliot A, Allaire E, Cordonnier C, Bretagne S, Botterel F, Primary in vitro culture of porcine tracheal epithelial cells in an air-liquid interface as a model to study airway epithelium and Aspergillus fumigatus interactions, Med. Mycol. 2010 Dec;48(8):1049-55.
• 2010
  Botterel F, Foulet F, Legrand P, Soria AM, Farrugia C, Grimbert P, Matignon M, Lauzet JY, Guerrini P, Bretagne S, Yeast contamination of kidney, liver and cardiac preservation solutions before graft: need for standardisation of microbial evaluation, J. Hosp. Infect. 2010 Sep;76(1):52-5.
• 2010
  Garcia-Hermoso D, MacCallum DM, Lott TJ, Sampaio P, Serna MJ, Grenouillet F, Klaassen CH, Bretagne S, Multicenter collaborative study for standardization of Candida albicans genotyping using a polymorphic microsatellite marker, J. Clin. Microbiol. 2010 Jul;48(7):2578-81.
• 2010
  Dannaoui E, Schwarz P, Slany M, Loeffler J, Jorde AT, Cuenca-Estrella M, Hauser PM, Shrief R, Huerre M, Freiberger T, Gaustad P, Rodriguez-Tudela JL, Bille J, Denning DW, Bretagne S, Lortholary O, Molecular detection and identification of zygomycetes species from paraffin-embedded tissues in a murine model of disseminated zygomycosis: a collaborative European Society of Clinical Microbiology and Infectious Diseases (ESCMID) Fungal Infection Study Group (EFISG) evaluation, J. Clin. Microbiol. 2010 Jun;48(6):2043-6.